RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 IFT80Q9P2H3 777 aaPredicted RBP11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 SNAPC5O75971 98 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 PPP4CP60510 307 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 ZNF627Q7L945 461 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 PRSS58Q8IYP2 241 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 PIWIL2Q8TC59 973 aaKnown RBP11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 THUMPD1Q9NXG2 353 aaKnown RBP11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 ZNF878C9JN71 531 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 GLP1RP43220 463 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 MAZP56270 477 aaKnown RBP11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 STRADAQ7RTN6 431 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 LYSMD3Q7Z3D4 306 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 CNDP2Q96KP4 475 aaKnown RBP11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 MARK4Q96L34 752 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 AGO3Q9H9G7 860 aaKnown RBP11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 DHPSP49366 369 aaPredicted RBP11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 DEFB115Q30KQ5 88 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 FAM183BPQ6ZVS7 135 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 CLTCL1P53675 1640 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 STBD1O95210 358 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 SPATA31A1Q5TZJ5 1347 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 CFAP206Q8IYR0 622 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 FBXW8Q8N3Y1 598 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 ZNF570Q96NI8 536 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 ASPNQ9BXN1 380 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 MRPL42Q9Y6G3 142 aaKnown RBP11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 SCAMP3O14828 347 aaKnown RBP11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 AP5Z1O43299 807 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 C8GP07360 202 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 ARP10275 920 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 RIDAP52758 137 aaKnown RBP11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 NR1H2P55055 460 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 TARBP2Q15633 366 aaKnown RBP11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 ARHGAP40Q5TG30 622 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 ANKRD26P1Q6NSI1 321 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 SLC30A10Q6XR72 485 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 SIRT2Q8IXJ6 389 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 CMTR2Q8IYT2 770 aaKnown RBP11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 NEXMIFQ5QGS0 1516 aa11.08□□□□□ -0.63
PTCHD1-201ENST00000379361 NME6O75414 186 aaPredicted RBP11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 SCGB1D2O95969 90 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 CCNE2O96020 404 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 ITGA5P08648 1049 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 ZFP69Q49AA0 526 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 ZNF670Q9BS34 389 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 IFT27Q9BW83 186 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 ADGRE2Q9UHX3 823 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 CACNA1SQ13698 1873 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 A0A1B0GVM2 712 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 TCAF2A6NFQ2 919 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 ARSKQ6UWY0 536 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 PROKR2Q8NFJ6 384 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 PLD4Q96BZ4 506 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 LPLP06858 475 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 ZNF35P13682 527 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 PTPRAP18433 802 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 CCR10P46092 362 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 GALK2Q01415 458 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 LAPTM4BQ86VI4 370 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 MAFIPQ8WZ33 124 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 SHC3Q92529 594 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 SLC7A6OSQ96CW6 309 aaPredicted RBP11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 TRMOQ9BU70 441 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 KCNN3Q9UGI6 736 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 NUP50Q9UKX7 468 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 AK5Q9Y6K8 562 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 SCN5AQ14524 2016 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 CLDN9O95484 217 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 PUM1Q14671 1186 aaKnown RBP eCLIP11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 ANKS1BQ7Z6G8 1248 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 RNF148Q8N7C7 305 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 SCGB1C1Q8TD33 95 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 APOLD1Q96LR9 279 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 BACE2Q9Y5Z0 518 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 RHBDF2Q6PJF5 856 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 HNRNPLLQ8WVV9 542 aaKnown RBP11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 EXOSC8Q96B26 276 aaKnown RBP11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 TUBA8Q9NY65 449 aaPredicted RBP11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 DKK3Q9UBP4 350 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 TIMM8BQ9Y5J9 83 aaPredicted RBP11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 SSTR1P30872 391 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 BCL2A1Q16548 175 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 C22orf15Q8WYQ4 148 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 F8VP50 259 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 C1RP00736 705 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 SERPINA6P08185 405 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 KIR3DL1P43629 444 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 ARPC4P59998 168 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 NFKB2Q00653 900 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 GHRHRQ02643 423 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 OR10A4Q9H209 315 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 HPF1Q9NWY4 346 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 USP42Q9H9J4 1324 aaKnown RBP11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 RABL6Q3YEC7 729 aaPredicted RBP11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 PLEKHA6Q9Y2H5 1048 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 ZNF609O15014 1411 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 H3BNX3 289 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 TFECO14948 347 aaPredicted RBP11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 SLC20A2Q08357 652 aa11.08□□□□□ -0.64
PTCHD1-201ENST00000379361 ZNF844Q08AG5 666 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms