RNA–Protein interactions for RNA: ENST00000377811.3

NDUFB11-202, Transcript of NADH:ubiquinone oxidoreductase subunit B11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFB11, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB11-202ENST00000377811 RIMKLBQ9ULI2 386 aa12.9□□□□□ -0.34
NDUFB11-202ENST00000377811 VPS4AQ9UN37 437 aa12.9□□□□□ -0.34
NDUFB11-202ENST00000377811 KCTD3Q9Y597 815 aa12.9□□□□□ -0.34
NDUFB11-202ENST00000377811 HS3ST3A1Q9Y663 406 aa12.9□□□□□ -0.34
NDUFB11-202ENST00000377811 CCDC168Q8NDH2 2452 aa12.9□□□□□ -0.34
NDUFB11-202ENST00000377811 DCHS2Q6V1P9 2916 aa12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 C16orf96A6NNT2 1141 aa12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 A8MX80 341 aa12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 HMGB1P1B2RPK0 211 aaPredicted RBP12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 LMO7DNF2Z398 122 aa12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 GOLGA8TH3BQL2 631 aa12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 PCDH8O95206 1070 aa12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 PAK4O96013 591 aaPredicted RBP12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 ITGB7P26010 798 aa12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 OAS2P29728 719 aaKnown RBP12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 SERPINB9P50453 376 aa12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 ZNF140P52738 457 aaPredicted RBP12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 UGP2Q16851 508 aa12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 LRRC73Q5JTD7 316 aa12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 AFTPHQ6ULP2 937 aa12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 MARK2Q7KZI7 788 aaKnown RBP12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 ZSWIM9Q86XI8 627 aa12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 TDRPQ86YL5 185 aa12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 DCP2Q8IU60 420 aaKnown RBP12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 SLITRK4Q8IW52 837 aa12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 SFTPA2Q8IWL1 248 aa12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 SLC44A1Q8WWI5 657 aa12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 HDAC10Q969S8 669 aa12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 SCRN2Q96FV2 425 aa12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 ATP6V1G3Q96LB4 118 aa12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 TMEM74Q96NL1 305 aa12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 SMIM14Q96QK8 99 aa12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 CPNE1Q99829 537 aa12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 SH3GL2Q99962 352 aa12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 SEMA6CQ9H3T2 930 aa12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 PLAC1Q9HBJ0 212 aa12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 BPIFA1Q9NP55 256 aa12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 NLE1Q9NVX2 485 aaPredicted RBP12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 CUEDC1Q9NWM3 386 aaPredicted RBP12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 DKK3Q9UBP4 350 aa12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 APOBEC3BQ9UH17 382 aaKnown RBP12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 NOVA2Q9UNW9 492 aaKnown RBP12.89□□□□□ -0.35
NDUFB11-202ENST00000377811 NIPBLQ6KC79 2804 aaeCLIP12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 SPG11Q96JI7 2443 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 TSPAN11A1L157 253 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 CXorf49A8MYA2 514 aaPredicted RBP12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 STMND1H3BQB6 276 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 TMX2-CTNND1H3BSU7 103 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 CCL22O00626 93 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 NEMP1O14524 444 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 AURKAO14965 403 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 PFDN6O15212 129 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 CLDN7O95471 211 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 SYF2O95926 243 aaKnown RBP12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 GOT2P00505 430 aaKnown RBP12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 PDGFAP04085 211 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 ANXA6P08133 673 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 VIPR1P32241 457 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 UGT1A3P35503 534 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 NEK3P51956 506 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 CCDC15Q0P6D6 951 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 ELP6Q0PNE2 266 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 MSLNQ13421 630 aaPredicted RBP12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 EIF2S3LQ2VIR3 472 aaKnown RBP12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 DEFB109BQ30KR1 87 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 FASTKD1Q53R41 847 aaKnown RBP12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 KCTD16Q68DU8 428 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 ZNF470Q6ECI4 717 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 NEK5Q6P3R8 708 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 ADGRD1Q6QNK2 874 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 PARS2Q7L3T8 475 aaKnown RBP12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 STRA8Q7Z7C7 330 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 PHACTR4Q8IZ21 702 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 CNPY4Q8N129 248 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 KRT222Q8N1A0 295 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 TTC30BQ8N4P2 665 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 Q8N9G6 341 aaPredicted RBP12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 OR13J1Q8NGT2 312 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 GLMNQ92990 594 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 ARL8AQ96BM9 186 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 PGM2Q96G03 612 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 TBATAQ96M53 351 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 SMYD2Q9NRG4 433 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 CATSPERZQ9NTU4 200 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 PKD2L2Q9NZM6 624 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 SPASTQ9UBP0 616 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 B4GALT6Q9UBX8 382 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 LGALS13Q9UHV8 139 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 PPIL1Q9Y3C6 166 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 SLC30A1Q9Y6M5 507 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 RNF215Q9Y6U7 377 aa12.88□□□□□ -0.35
NDUFB11-202ENST00000377811 LRP4O75096 1905 aa12.87□□□□□ -0.35
NDUFB11-202ENST00000377811 NPIPB15A6NHN6 443 aaPredicted RBP12.87□□□□□ -0.35
NDUFB11-202ENST00000377811 H3BQF6 201 aa12.87□□□□□ -0.35
NDUFB11-202ENST00000377811 TIMP2P16035 220 aa12.87□□□□□ -0.35
NDUFB11-202ENST00000377811 ZNF30P17039 623 aa12.87□□□□□ -0.35
NDUFB11-202ENST00000377811 CD82P27701 267 aa12.87□□□□□ -0.35
NDUFB11-202ENST00000377811 MC4RP32245 332 aa12.87□□□□□ -0.35
NDUFB11-202ENST00000377811 SPRP35270 261 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms