RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 ATP8B1O43520 1251 aa20.85■□□□□ 0.93
CBWD3-202ENST00000377342 MPOP05164 745 aa20.85■□□□□ 0.93
CBWD3-202ENST00000377342 CTSEP14091 401 aa20.85■□□□□ 0.93
CBWD3-202ENST00000377342 BRAFP15056 766 aa20.85■□□□□ 0.93
CBWD3-202ENST00000377342 CREB1P16220 341 aa20.85■□□□□ 0.93
CBWD3-202ENST00000377342 IL9RQ01113 521 aa20.85■□□□□ 0.93
CBWD3-202ENST00000377342 RPA4Q13156 261 aa20.85■□□□□ 0.93
CBWD3-202ENST00000377342 SEPT7Q16181 437 aaKnown RBP20.85■□□□□ 0.93
CBWD3-202ENST00000377342 TTMPQ5BVD1 217 aa20.85■□□□□ 0.93
CBWD3-202ENST00000377342 KANSL1Q7Z3B3 1105 aa20.85■□□□□ 0.93
CBWD3-202ENST00000377342 SPDYE1Q8NFV5 336 aaPredicted RBP20.85■□□□□ 0.93
CBWD3-202ENST00000377342 RMDN2Q96LZ7 410 aa20.85■□□□□ 0.93
CBWD3-202ENST00000377342 GSDMCQ9BYG8 508 aa20.85■□□□□ 0.93
CBWD3-202ENST00000377342 UNKQ9C0B0 810 aaKnown RBP20.85■□□□□ 0.93
CBWD3-202ENST00000377342 DPEP2Q9H4A9 486 aa20.85■□□□□ 0.93
CBWD3-202ENST00000377342 IGSF5Q9NSI5 407 aa20.85■□□□□ 0.93
CBWD3-202ENST00000377342 ACOT9Q9Y305 439 aa20.85■□□□□ 0.93
CBWD3-202ENST00000377342 A0A087X1B8 175 aa20.84■□□□□ 0.93
CBWD3-202ENST00000377342 LNP1A1A4G5 178 aa20.84■□□□□ 0.93
CBWD3-202ENST00000377342 EIF3FO00303 357 aaPredicted RBP20.84■□□□□ 0.93
CBWD3-202ENST00000377342 AQP9O43315 295 aa20.84■□□□□ 0.93
CBWD3-202ENST00000377342 SYF2O95926 243 aaKnown RBP20.84■□□□□ 0.93
CBWD3-202ENST00000377342 CCDC166P0CW27 439 aa20.84■□□□□ 0.93
CBWD3-202ENST00000377342 CBSLP0DN79 551 aa20.84■□□□□ 0.93
CBWD3-202ENST00000377342 KRT4P19013 534 aa20.84■□□□□ 0.93
CBWD3-202ENST00000377342 DGKAP23743 735 aa20.84■□□□□ 0.93
CBWD3-202ENST00000377342 RPL10P27635 214 aaKnown RBP20.84■□□□□ 0.93
CBWD3-202ENST00000377342 EPHA8P29322 1005 aaPredicted RBP20.84■□□□□ 0.93
CBWD3-202ENST00000377342 CBSP35520 551 aa20.84■□□□□ 0.93
CBWD3-202ENST00000377342 EXOC3L1Q86VI1 746 aa20.84■□□□□ 0.93
CBWD3-202ENST00000377342 LMX1AQ8TE12 382 aa20.84■□□□□ 0.93
CBWD3-202ENST00000377342 ZDHHC5Q9C0B5 715 aa20.84■□□□□ 0.93
CBWD3-202ENST00000377342 SYTL2Q9HCH5 934 aa20.84■□□□□ 0.93
CBWD3-202ENST00000377342 PRDM8Q9NQV8 689 aa20.84■□□□□ 0.93
CBWD3-202ENST00000377342 SPASTQ9UBP0 616 aa20.84■□□□□ 0.93
CBWD3-202ENST00000377342 PSMD13Q9UNM6 376 aa20.84■□□□□ 0.93
CBWD3-202ENST00000377342 KHNYNO15037 678 aaKnown RBP20.83■□□□□ 0.93
CBWD3-202ENST00000377342 ENO3P13929 434 aaPredicted RBP20.83■□□□□ 0.93
CBWD3-202ENST00000377342 ENGP17813 658 aa20.83■□□□□ 0.93
CBWD3-202ENST00000377342 SLC26A3P40879 764 aa20.83■□□□□ 0.93
CBWD3-202ENST00000377342 ARRB1P49407 418 aaPredicted RBP20.83■□□□□ 0.93
CBWD3-202ENST00000377342 IL2P60568 153 aa20.83■□□□□ 0.93
CBWD3-202ENST00000377342 SLC18A2Q05940 514 aa20.83■□□□□ 0.93
CBWD3-202ENST00000377342 BNIP3Q12983 259 aa20.83■□□□□ 0.93
CBWD3-202ENST00000377342 CSHL1Q14406 222 aa20.83■□□□□ 0.93
CBWD3-202ENST00000377342 IL27RAQ6UWB1 636 aa20.83■□□□□ 0.93
CBWD3-202ENST00000377342 CYHR1Q6ZMK1 362 aa20.83■□□□□ 0.93
CBWD3-202ENST00000377342 CCDC91Q7Z6B0 441 aa20.83■□□□□ 0.93
CBWD3-202ENST00000377342 PDZD3Q86UT5 571 aa20.83■□□□□ 0.93
CBWD3-202ENST00000377342 FSTL5Q8N475 847 aaPredicted RBP20.83■□□□□ 0.93
CBWD3-202ENST00000377342 PDLIM5Q96HC4 596 aaKnown RBP20.83■□□□□ 0.93
CBWD3-202ENST00000377342 CABS1Q96KC9 395 aa20.83■□□□□ 0.93
CBWD3-202ENST00000377342 GPR78Q96P69 363 aa20.83■□□□□ 0.93
CBWD3-202ENST00000377342 NUSAP1Q9BXS6 441 aaKnown RBP20.83■□□□□ 0.93
CBWD3-202ENST00000377342 WWP1Q9H0M0 922 aa20.83■□□□□ 0.93
CBWD3-202ENST00000377342 ACBD3Q9H3P7 528 aa20.83■□□□□ 0.93
CBWD3-202ENST00000377342 GAREM1Q9H706 876 aa20.83■□□□□ 0.93
CBWD3-202ENST00000377342 ZNF358Q9NW07 568 aa20.83■□□□□ 0.93
CBWD3-202ENST00000377342 TAAR2Q9P1P5 351 aa20.83■□□□□ 0.93
CBWD3-202ENST00000377342 GMEB2Q9UKD1 530 aa20.83■□□□□ 0.93
CBWD3-202ENST00000377342 TLK1Q9UKI8 766 aa20.83■□□□□ 0.93
CBWD3-202ENST00000377342 PCOLCE2Q9UKZ9 415 aa20.83■□□□□ 0.93
CBWD3-202ENST00000377342 ACSL5Q9ULC5 683 aa20.83■□□□□ 0.93
CBWD3-202ENST00000377342 EP300Q09472 2414 aaPredicted RBP20.83■□□□□ 0.92
CBWD3-202ENST00000377342 CD1DP15813 335 aa20.83■□□□□ 0.92
CBWD3-202ENST00000377342 IDSP22304 550 aa20.83■□□□□ 0.92
CBWD3-202ENST00000377342 ACADLP28330 430 aa20.83■□□□□ 0.92
CBWD3-202ENST00000377342 RGS4P49798 205 aa20.83■□□□□ 0.92
CBWD3-202ENST00000377342 PLOD1Q02809 727 aaPredicted RBP20.83■□□□□ 0.92
CBWD3-202ENST00000377342 ELOCQ15369 112 aa20.83■□□□□ 0.92
CBWD3-202ENST00000377342 AGBL2Q5U5Z8 902 aa20.83■□□□□ 0.92
CBWD3-202ENST00000377342 NEK10Q6ZWH5 1172 aa20.83■□□□□ 0.92
CBWD3-202ENST00000377342 TAF8Q7Z7C8 310 aa20.83■□□□□ 0.92
CBWD3-202ENST00000377342 TBC1D1Q86TI0 1168 aaPredicted RBP20.83■□□□□ 0.92
CBWD3-202ENST00000377342 RASGRP3Q8IV61 690 aa20.83■□□□□ 0.92
CBWD3-202ENST00000377342 SFTPA2Q8IWL1 248 aa20.83■□□□□ 0.92
CBWD3-202ENST00000377342 NKAPQ8N5F7 415 aaKnown RBP20.83■□□□□ 0.92
CBWD3-202ENST00000377342 NXNL1Q96CM4 212 aa20.83■□□□□ 0.92
CBWD3-202ENST00000377342 DERL2Q9GZP9 239 aa20.83■□□□□ 0.92
CBWD3-202ENST00000377342 SCHIP1Q9P0W5 487 aaPredicted RBP20.83■□□□□ 0.92
CBWD3-202ENST00000377342 NOVA2Q9UNW9 492 aaKnown RBP20.83■□□□□ 0.92
CBWD3-202ENST00000377342 LMO7DNF2Z398 122 aa20.82■□□□□ 0.92
CBWD3-202ENST00000377342 OPA1O60313 960 aa20.82■□□□□ 0.92
CBWD3-202ENST00000377342 SNX2O60749 519 aa20.82■□□□□ 0.92
CBWD3-202ENST00000377342 LMNAP02545 664 aaKnown RBP20.82■□□□□ 0.92
CBWD3-202ENST00000377342 SYPP08247 313 aa20.82■□□□□ 0.92
CBWD3-202ENST00000377342 SLC35G4P0C7Q5 338 aa20.82■□□□□ 0.92
CBWD3-202ENST00000377342 GIMD1P0DJR0 217 aa20.82■□□□□ 0.92
CBWD3-202ENST00000377342 MPC1LP0DKB6 136 aa20.82■□□□□ 0.92
CBWD3-202ENST00000377342 CLCA4Q14CN2 919 aa20.82■□□□□ 0.92
CBWD3-202ENST00000377342 AGAP9Q5VTM2 703 aa20.82■□□□□ 0.92
CBWD3-202ENST00000377342 CAPRIN2Q6IMN6 1127 aaKnown RBP20.82■□□□□ 0.92
CBWD3-202ENST00000377342 CDHR3Q6ZTQ4 885 aa20.82■□□□□ 0.92
CBWD3-202ENST00000377342 SLC25A45Q8N413 288 aa20.82■□□□□ 0.92
CBWD3-202ENST00000377342 PTERQ96BW5 349 aa20.82■□□□□ 0.92
CBWD3-202ENST00000377342 ATP6V1G3Q96LB4 118 aa20.82■□□□□ 0.92
CBWD3-202ENST00000377342 MKS1Q9NXB0 559 aa20.82■□□□□ 0.92
CBWD3-202ENST00000377342 SENP1Q9P0U3 644 aa20.82■□□□□ 0.92
CBWD3-202ENST00000377342 PDZK1P1A8MUH7 402 aa20.81■□□□□ 0.92
CBWD3-202ENST00000377342 ZBTB14O43829 449 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms