RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 KLF1Q13351 362 aaPredicted RBP20.51■□□□□ 0.87
VSX1-201ENST00000376707 LACTB2Q53H82 288 aaPredicted RBP20.51■□□□□ 0.87
VSX1-201ENST00000376707 CERS6Q6ZMG9 384 aa20.51■□□□□ 0.87
VSX1-201ENST00000376707 ARHGEF18Q6ZSZ5 1173 aa20.51■□□□□ 0.87
VSX1-201ENST00000376707 D2HGDHQ8N465 521 aa20.51■□□□□ 0.87
VSX1-201ENST00000376707 LILRA3Q8N6C8 439 aaPredicted RBP20.51■□□□□ 0.87
VSX1-201ENST00000376707 TTC13Q8NBP0 860 aa20.51■□□□□ 0.87
VSX1-201ENST00000376707 EPN3Q9H201 632 aa20.51■□□□□ 0.87
VSX1-201ENST00000376707 ARNT2Q9HBZ2 717 aa20.51■□□□□ 0.87
VSX1-201ENST00000376707 PCDHGA6Q9Y5G7 932 aa20.51■□□□□ 0.87
VSX1-201ENST00000376707 CCL22O00626 93 aa20.5■□□□□ 0.87
VSX1-201ENST00000376707 ARHGAP6O43182 974 aa20.5■□□□□ 0.87
VSX1-201ENST00000376707 CREG1O75629 220 aa20.5■□□□□ 0.87
VSX1-201ENST00000376707 ZBTB11O95625 1053 aaPredicted RBP20.5■□□□□ 0.87
VSX1-201ENST00000376707 NTRK1P04629 796 aa20.5■□□□□ 0.87
VSX1-201ENST00000376707 FURINP09958 794 aa20.5■□□□□ 0.87
VSX1-201ENST00000376707 ATP1B2P14415 290 aaPredicted RBP20.5■□□□□ 0.87
VSX1-201ENST00000376707 MC4RP32245 332 aa20.5■□□□□ 0.87
VSX1-201ENST00000376707 CASRP41180 1078 aa20.5■□□□□ 0.87
VSX1-201ENST00000376707 ARCN1P48444 511 aaKnown RBP20.5■□□□□ 0.87
VSX1-201ENST00000376707 TUBB4BP68371 445 aa20.5■□□□□ 0.87
VSX1-201ENST00000376707 PRKAA1Q13131 559 aa20.5■□□□□ 0.87
VSX1-201ENST00000376707 TUBB2AQ13885 445 aa20.5■□□□□ 0.87
VSX1-201ENST00000376707 GPR33Q49SQ1 333 aa20.5■□□□□ 0.87
VSX1-201ENST00000376707 TMTC4Q5T4D3 741 aa20.5■□□□□ 0.87
VSX1-201ENST00000376707 CAPRIN2Q6IMN6 1127 aaKnown RBP20.5■□□□□ 0.87
VSX1-201ENST00000376707 CARFQ8N187 725 aa20.5■□□□□ 0.87
VSX1-201ENST00000376707 HES6Q96HZ4 224 aa20.5■□□□□ 0.87
VSX1-201ENST00000376707 TUBB2BQ9BVA1 445 aa20.5■□□□□ 0.87
VSX1-201ENST00000376707 SOHLH2Q9NX45 425 aa20.5■□□□□ 0.87
VSX1-201ENST00000376707 PACSIN2Q9UNF0 486 aaPredicted RBP20.5■□□□□ 0.87
VSX1-201ENST00000376707 MKRN2OSH3BPM6 223 aa20.49■□□□□ 0.87
VSX1-201ENST00000376707 LDB2O43679 373 aa20.49■□□□□ 0.87
VSX1-201ENST00000376707 FTCDO95954 541 aa20.49■□□□□ 0.87
VSX1-201ENST00000376707 POLR2CP19387 275 aaPredicted RBP20.49■□□□□ 0.87
VSX1-201ENST00000376707 KPNA2P52292 529 aaKnown RBP20.49■□□□□ 0.87
VSX1-201ENST00000376707 GPR19Q15760 415 aa20.49■□□□□ 0.87
VSX1-201ENST00000376707 PARP6Q2NL67 630 aa20.49■□□□□ 0.87
VSX1-201ENST00000376707 ZRANB3Q5FWF4 1079 aa20.49■□□□□ 0.87
VSX1-201ENST00000376707 TMEM126BQ8IUX1 230 aa20.49■□□□□ 0.87
VSX1-201ENST00000376707 RNF10Q8N5U6 811 aaKnown RBP20.49■□□□□ 0.87
VSX1-201ENST00000376707 SPC24Q8NBT2 197 aa20.49■□□□□ 0.87
VSX1-201ENST00000376707 ACVR1CQ8NER5 493 aa20.49■□□□□ 0.87
VSX1-201ENST00000376707 OR4E2Q8NGC2 313 aa20.49■□□□□ 0.87
VSX1-201ENST00000376707 OR8K5Q8NH50 307 aa20.49■□□□□ 0.87
VSX1-201ENST00000376707 DNAJC1Q96KC8 554 aaKnown RBP20.49■□□□□ 0.87
VSX1-201ENST00000376707 ACTL8Q9H568 366 aa20.49■□□□□ 0.87
VSX1-201ENST00000376707 VPS37BQ9H9H4 285 aa20.49■□□□□ 0.87
VSX1-201ENST00000376707 ZDHHC3Q9NYG2 299 aa20.49■□□□□ 0.87
VSX1-201ENST00000376707 C17orf113A0A1B0GUU1 675 aa20.48■□□□□ 0.87
VSX1-201ENST00000376707 IFRD1O00458 451 aaPredicted RBP20.48■□□□□ 0.87
VSX1-201ENST00000376707 CPNE3O75131 537 aaKnown RBP20.48■□□□□ 0.87
VSX1-201ENST00000376707 SCRG1O75711 98 aa20.48■□□□□ 0.87
VSX1-201ENST00000376707 RECKO95980 971 aa20.48■□□□□ 0.87
VSX1-201ENST00000376707 KCTD11Q693B1 232 aa20.48■□□□□ 0.87
VSX1-201ENST00000376707 ZNF449Q6P9G9 518 aa20.48■□□□□ 0.87
VSX1-201ENST00000376707 FAM199XQ6PEV8 388 aaPredicted RBP20.48■□□□□ 0.87
VSX1-201ENST00000376707 TMEM135Q86UB9 458 aa20.48■□□□□ 0.87
VSX1-201ENST00000376707 FAM71DQ8N9W8 422 aa20.48■□□□□ 0.87
VSX1-201ENST00000376707 SLC35B2Q8TB61 432 aa20.48■□□□□ 0.87
VSX1-201ENST00000376707 LCN9Q8WX39 176 aa20.48■□□□□ 0.87
VSX1-201ENST00000376707 FERD3LQ96RJ6 166 aa20.48■□□□□ 0.87
VSX1-201ENST00000376707 SRMSQ9H3Y6 488 aa20.48■□□□□ 0.87
VSX1-201ENST00000376707 LRRC40Q9H9A6 602 aa20.48■□□□□ 0.87
VSX1-201ENST00000376707 COG4Q9H9E3 785 aa20.48■□□□□ 0.87
VSX1-201ENST00000376707 KCND1Q9NSA2 647 aa20.48■□□□□ 0.87
VSX1-201ENST00000376707 TP53TG5Q9Y2B4 290 aa20.48■□□□□ 0.87
VSX1-201ENST00000376707 MAN2B2Q9Y2E5 1009 aa20.48■□□□□ 0.87
VSX1-201ENST00000376707 CAPN6Q9Y6Q1 641 aa20.48■□□□□ 0.87
VSX1-201ENST00000376707 MATN2O00339 956 aa20.47■□□□□ 0.87
VSX1-201ENST00000376707 RFPL1O75677 317 aa20.47■□□□□ 0.87
VSX1-201ENST00000376707 TPH1P17752 444 aa20.47■□□□□ 0.87
VSX1-201ENST00000376707 CDH3P22223 829 aa20.47■□□□□ 0.87
VSX1-201ENST00000376707 ACRV1P26436 265 aa20.47■□□□□ 0.87
VSX1-201ENST00000376707 CDKN1CP49918 316 aaPredicted RBP20.47■□□□□ 0.87
VSX1-201ENST00000376707 RPS15P62841 145 aaKnown RBP20.47■□□□□ 0.87
VSX1-201ENST00000376707 FBXO38Q6PIJ6 1188 aa20.47■□□□□ 0.87
VSX1-201ENST00000376707 TAS2R42Q7RTR8 314 aa20.47■□□□□ 0.87
VSX1-201ENST00000376707 SERPINA9Q86WD7 417 aa20.47■□□□□ 0.87
VSX1-201ENST00000376707 UBE2Q2Q8WVN8 375 aa20.47■□□□□ 0.87
VSX1-201ENST00000376707 SEC14L1Q92503 715 aa20.47■□□□□ 0.87
VSX1-201ENST00000376707 ZNF501Q96CX3 271 aaPredicted RBP20.47■□□□□ 0.87
VSX1-201ENST00000376707 PPM1MQ96MI6 270 aa20.47■□□□□ 0.87
VSX1-201ENST00000376707 GPR87Q9BY21 358 aa20.47■□□□□ 0.87
VSX1-201ENST00000376707 AKIRIN1Q9H9L7 192 aaPredicted RBP20.47■□□□□ 0.87
VSX1-201ENST00000376707 FANCEQ9HB96 536 aa20.47■□□□□ 0.87
VSX1-201ENST00000376707 NLE1Q9NVX2 485 aaPredicted RBP20.47■□□□□ 0.87
VSX1-201ENST00000376707 POMT2Q9UKY4 750 aa20.47■□□□□ 0.87
VSX1-201ENST00000376707 BTRCQ9Y297 605 aa20.47■□□□□ 0.87
VSX1-201ENST00000376707 IGLV3-16A0A075B6K0 115 aa20.46■□□□□ 0.87
VSX1-201ENST00000376707 GSAPA4D1B5 854 aa20.46■□□□□ 0.87
VSX1-201ENST00000376707 SLC9B1P1A6NJY1 282 aa20.46■□□□□ 0.87
VSX1-201ENST00000376707 METTL18O95568 372 aa20.46■□□□□ 0.87
VSX1-201ENST00000376707 PTPN4P29074 926 aa20.46■□□□□ 0.87
VSX1-201ENST00000376707 PMS2P54278 862 aa20.46■□□□□ 0.87
VSX1-201ENST00000376707 POU6F1Q14863 301 aa20.46■□□□□ 0.87
VSX1-201ENST00000376707 P3H1Q32P28 736 aa20.46■□□□□ 0.87
VSX1-201ENST00000376707 MR1Q95460 341 aa20.46■□□□□ 0.87
VSX1-201ENST00000376707 ALS2CR12Q96Q35 445 aa20.46■□□□□ 0.87
VSX1-201ENST00000376707 RUFY1Q96T51 708 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms