RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 ZNF542PQ5EBM4 170 aa22.44■■□□□ 1.18
HLA-C-202ENST00000376237 LVRNQ6Q4G3 990 aa22.44■■□□□ 1.18
HLA-C-202ENST00000376237 XKR5Q6UX68 686 aa22.44■■□□□ 1.18
HLA-C-202ENST00000376237 PIWIL4Q7Z3Z4 852 aaKnown RBP22.44■■□□□ 1.18
HLA-C-202ENST00000376237 VRK3Q8IV63 474 aa22.44■■□□□ 1.18
HLA-C-202ENST00000376237 RHEBL1Q8TAI7 183 aa22.44■■□□□ 1.18
HLA-C-202ENST00000376237 STAG3L4Q8TBR4 150 aa22.44■■□□□ 1.18
HLA-C-202ENST00000376237 TCP10LQ8TDR4 215 aa22.44■■□□□ 1.18
HLA-C-202ENST00000376237 SKA2Q8WVK7 121 aaPredicted RBP22.44■■□□□ 1.18
HLA-C-202ENST00000376237 KIAA1191Q96A73 305 aa22.44■■□□□ 1.18
HLA-C-202ENST00000376237 FOPNLQ96NB1 174 aa22.44■■□□□ 1.18
HLA-C-202ENST00000376237 OR52A5Q9H2C5 316 aa22.44■■□□□ 1.18
HLA-C-202ENST00000376237 ZNF358Q9NW07 568 aa22.44■■□□□ 1.18
HLA-C-202ENST00000376237 TMEM216Q9P0N5 145 aa22.44■■□□□ 1.18
HLA-C-202ENST00000376237 ZNF318Q5VUA4 2279 aa22.44■■□□□ 1.18
HLA-C-202ENST00000376237 TMEM120BA0PK00 339 aa22.43■■□□□ 1.18
HLA-C-202ENST00000376237 IFRD1O00458 451 aaPredicted RBP22.43■■□□□ 1.18
HLA-C-202ENST00000376237 EPN2O95208 641 aa22.43■■□□□ 1.18
HLA-C-202ENST00000376237 TOP3BO95985 862 aaKnown RBP22.43■■□□□ 1.18
HLA-C-202ENST00000376237 SLC35G4P0C7Q5 338 aa22.43■■□□□ 1.18
HLA-C-202ENST00000376237 TFEBP19484 476 aa22.43■■□□□ 1.18
HLA-C-202ENST00000376237 PPP2R2AP63151 447 aa22.43■■□□□ 1.18
HLA-C-202ENST00000376237 ELOCQ15369 112 aa22.43■■□□□ 1.18
HLA-C-202ENST00000376237 KIF19Q2TAC6 998 aa22.43■■□□□ 1.18
HLA-C-202ENST00000376237 N4BP2L1Q5TBK1 243 aaPredicted RBP22.43■■□□□ 1.18
HLA-C-202ENST00000376237 WASH2PQ6VEQ5 465 aa22.43■■□□□ 1.18
HLA-C-202ENST00000376237 ADAMTSL2Q86TH1 951 aa22.43■■□□□ 1.18
HLA-C-202ENST00000376237 ISCA2Q86U28 154 aa22.43■■□□□ 1.18
HLA-C-202ENST00000376237 FSTL5Q8N475 847 aaPredicted RBP22.43■■□□□ 1.18
HLA-C-202ENST00000376237 ARFGAP2Q8N6H7 521 aa22.43■■□□□ 1.18
HLA-C-202ENST00000376237 MRPL57Q9BQC6 102 aaKnown RBP22.43■■□□□ 1.18
HLA-C-202ENST00000376237 WASH6PQ9NQA3 447 aa22.43■■□□□ 1.18
HLA-C-202ENST00000376237 SPASTQ9UBP0 616 aa22.43■■□□□ 1.18
HLA-C-202ENST00000376237 SLC6A14Q9UN76 642 aa22.43■■□□□ 1.18
HLA-C-202ENST00000376237 PLEKHM1Q9Y4G2 1056 aa22.43■■□□□ 1.18
HLA-C-202ENST00000376237 TNRC6BQ9UPQ9 1833 aaKnown RBP22.42■■□□□ 1.18
HLA-C-202ENST00000376237 BTN3A1O00481 513 aa22.42■■□□□ 1.18
HLA-C-202ENST00000376237 SLC16A5O15375 505 aa22.42■■□□□ 1.18
HLA-C-202ENST00000376237 ZBTB14O43829 449 aa22.42■■□□□ 1.18
HLA-C-202ENST00000376237 DFNA5O60443 496 aa22.42■■□□□ 1.18
HLA-C-202ENST00000376237 MATN4O95460 622 aa22.42■■□□□ 1.18
HLA-C-202ENST00000376237 C8GP07360 202 aa22.42■■□□□ 1.18
HLA-C-202ENST00000376237 NR1D1P20393 614 aa22.42■■□□□ 1.18
HLA-C-202ENST00000376237 RPA3P35244 121 aaPredicted RBP22.42■■□□□ 1.18
HLA-C-202ENST00000376237 ACTR1BP42025 376 aa22.42■■□□□ 1.18
HLA-C-202ENST00000376237 ACTR1AP61163 376 aa22.42■■□□□ 1.18
HLA-C-202ENST00000376237 SLC23A3Q6PIS1 610 aa22.42■■□□□ 1.18
HLA-C-202ENST00000376237 PDZD3Q86UT5 571 aa22.42■■□□□ 1.18
HLA-C-202ENST00000376237 SPNS2Q8IVW8 549 aa22.42■■□□□ 1.18
HLA-C-202ENST00000376237 ASB11Q8WXH4 323 aa22.42■■□□□ 1.18
HLA-C-202ENST00000376237 SCYL1Q96KG9 808 aa22.42■■□□□ 1.18
HLA-C-202ENST00000376237 SELENOSQ9BQE4 189 aa22.42■■□□□ 1.18
HLA-C-202ENST00000376237 ZDHHC5Q9C0B5 715 aa22.42■■□□□ 1.18
HLA-C-202ENST00000376237 MRPL46Q9H2W6 279 aaKnown RBP22.42■■□□□ 1.18
HLA-C-202ENST00000376237 TCEAL2Q9H3H9 227 aaPredicted RBP22.42■■□□□ 1.18
HLA-C-202ENST00000376237 FAM53CQ9NYF3 392 aa22.42■■□□□ 1.18
HLA-C-202ENST00000376237 NKIRAS1Q9NYS0 192 aa22.42■■□□□ 1.18
HLA-C-202ENST00000376237 PCOLCE2Q9UKZ9 415 aa22.42■■□□□ 1.18
HLA-C-202ENST00000376237 SNX11Q9Y5W9 270 aa22.42■■□□□ 1.18
HLA-C-202ENST00000376237 ST14Q9Y5Y6 855 aa22.42■■□□□ 1.18
HLA-C-202ENST00000376237 SPAG17Q6Q759 2223 aa22.42■■□□□ 1.18
HLA-C-202ENST00000376237 SCAMP1O15126 338 aa22.41■■□□□ 1.18
HLA-C-202ENST00000376237 CFIP05156 583 aa22.41■■□□□ 1.18
HLA-C-202ENST00000376237 GLRBP48167 497 aa22.41■■□□□ 1.18
HLA-C-202ENST00000376237 RXRGP48443 463 aa22.41■■□□□ 1.18
HLA-C-202ENST00000376237 ARRB1P49407 418 aaPredicted RBP22.41■■□□□ 1.18
HLA-C-202ENST00000376237 SP140Q13342 867 aa22.41■■□□□ 1.18
HLA-C-202ENST00000376237 LPAL2Q16609 132 aa22.41■■□□□ 1.18
HLA-C-202ENST00000376237 PRRT3Q5FWE3 981 aa22.41■■□□□ 1.18
HLA-C-202ENST00000376237 TECRLQ5HYJ1 363 aa22.41■■□□□ 1.18
HLA-C-202ENST00000376237 LAIR1Q6GTX8 287 aa22.41■■□□□ 1.18
HLA-C-202ENST00000376237 IL27RAQ6UWB1 636 aa22.41■■□□□ 1.18
HLA-C-202ENST00000376237 ABRAXAS1Q6UWZ7 409 aa22.41■■□□□ 1.18
HLA-C-202ENST00000376237 NRROSQ86YC3 692 aa22.41■■□□□ 1.18
HLA-C-202ENST00000376237 ELF4Q99607 663 aaPredicted RBP22.41■■□□□ 1.18
HLA-C-202ENST00000376237 LRRC61Q9BV99 259 aa22.41■■□□□ 1.18
HLA-C-202ENST00000376237 CNOT10Q9H9A5 744 aaKnown RBP22.41■■□□□ 1.18
HLA-C-202ENST00000376237 CAPN10Q9HC96 672 aa22.41■■□□□ 1.18
HLA-C-202ENST00000376237 MID2Q9UJV3 735 aa22.41■■□□□ 1.18
HLA-C-202ENST00000376237 GFYI3L273 518 aa22.41■■□□□ 1.18
HLA-C-202ENST00000376237 PLIN3O60664 434 aa22.41■■□□□ 1.18
HLA-C-202ENST00000376237 AK4P27144 223 aaPredicted RBP22.41■■□□□ 1.18
HLA-C-202ENST00000376237 ACADLP28330 430 aa22.41■■□□□ 1.18
HLA-C-202ENST00000376237 HALP42357 657 aa22.41■■□□□ 1.18
HLA-C-202ENST00000376237 TSNQ15631 228 aaKnown RBP22.41■■□□□ 1.18
HLA-C-202ENST00000376237 UAP1L1Q3KQV9 507 aa22.41■■□□□ 1.18
HLA-C-202ENST00000376237 CAPRIN2Q6IMN6 1127 aaKnown RBP22.41■■□□□ 1.18
HLA-C-202ENST00000376237 C16orf46Q6P387 395 aa22.41■■□□□ 1.18
HLA-C-202ENST00000376237 TAF8Q7Z7C8 310 aa22.41■■□□□ 1.18
HLA-C-202ENST00000376237 CCL4L1Q8NHW4 92 aa22.41■■□□□ 1.18
HLA-C-202ENST00000376237 PTERQ96BW5 349 aa22.41■■□□□ 1.18
HLA-C-202ENST00000376237 UNKQ9C0B0 810 aaKnown RBP22.41■■□□□ 1.18
HLA-C-202ENST00000376237 KCNH6Q9H252 994 aa22.41■■□□□ 1.18
HLA-C-202ENST00000376237 ALG9Q9H6U8 611 aa22.41■■□□□ 1.18
HLA-C-202ENST00000376237 SYCE1LA8MT33 242 aa22.4■■□□□ 1.18
HLA-C-202ENST00000376237 PDZK1P1A8MUH7 402 aa22.4■■□□□ 1.18
HLA-C-202ENST00000376237 CDC7O00311 574 aa22.4■■□□□ 1.18
HLA-C-202ENST00000376237 KERAO60938 352 aa22.4■■□□□ 1.18
HLA-C-202ENST00000376237 PSIP1O75475 530 aaKnown RBP22.4■■□□□ 1.18
HLA-C-202ENST00000376237 PROCP04070 461 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms