RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 OTOP2Q7RTS6 562 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 SNX20Q7Z614 316 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 CMTM8Q8IZV2 173 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 DCBLD1Q8N8Z6 715 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 DDHD1Q8NEL9 900 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 LKAAEAR1Q8TD35 194 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 SLC45A3Q96JT2 553 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 CDK15Q96Q40 435 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 NUSAP1Q9BXS6 441 aaKnown RBP13.76□□□□□ -0.21
MSH5-202ENST00000375740 RPF2Q9H7B2 306 aaKnown RBP13.76□□□□□ -0.21
MSH5-202ENST00000375740 ATP13A3Q9H7F0 1226 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 IL1RL2Q9HB29 575 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 RBMX2Q9Y388 322 aaKnown RBP13.76□□□□□ -0.21
MSH5-202ENST00000375740 SEC24DO94855 1032 aaPredicted RBP13.75□□□□□ -0.21
MSH5-202ENST00000375740 INHBBP09529 407 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 CAPN3P20807 821 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 HMOX2P30519 316 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 MAPK8P45983 427 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 EIF2B2P49770 351 aaKnown RBP13.75□□□□□ -0.21
MSH5-202ENST00000375740 BMXP51813 675 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 PITRM1Q5JRX3 1037 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 GPR107Q5VW38 600 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 GPR65Q8IYL9 337 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 OR52B6Q8NGF0 335 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 BORCS5Q969J3 196 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 ROPN1LQ96C74 230 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 DUS2Q9NX74 493 aaKnown RBP13.75□□□□□ -0.21
MSH5-202ENST00000375740 NUDT4Q9NZJ9 180 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 NDUFAF1Q9Y375 327 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 SNX13Q9Y5W8 968 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 GPR45Q9Y5Y3 372 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 CARNS1A5YM72 827 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 GOLGA8CPA6NN73 597 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 BBIP1A8MTZ0 92 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 H3BMQ9 156 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 GIPC1O14908 333 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 BNIP3LO60238 219 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 SOCS5O75159 536 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 SLC25A14O95258 325 aaPredicted RBP13.75□□□□□ -0.21
MSH5-202ENST00000375740 TRIM16O95361 564 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 OXSR1O95747 527 aaPredicted RBP13.75□□□□□ -0.21
MSH5-202ENST00000375740 CHEK2O96017 543 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 PRR35P0CG20 571 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 ITGALP20701 1170 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 RPS3P23396 243 aaKnown RBP eCLIP13.75□□□□□ -0.21
MSH5-202ENST00000375740 SLC7A2P52569 658 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 ERVPABLB-1P60509 514 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 TRAP1Q12931 704 aaKnown RBP13.75□□□□□ -0.21
MSH5-202ENST00000375740 CHRNA6Q15825 494 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 SAMD4BQ5PRF9 694 aaKnown RBP13.75□□□□□ -0.21
MSH5-202ENST00000375740 SBSNQ6UWP8 590 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 FRA10AC1Q70Z53 315 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 SPATA19Q7Z5L4 167 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 TSPAN33Q86UF1 283 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 RBFAQ8N0V3 343 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 CDYL2Q8N8U2 506 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 KREMEN2Q8NCW0 462 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 OR2AP1Q8NGE2 309 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 OR2T11Q8NH01 316 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 SLC22A17Q8WUG5 538 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 COG8Q96MW5 612 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 NOL11Q9H8H0 719 aaKnown RBP13.75□□□□□ -0.21
MSH5-202ENST00000375740 CLK4Q9HAZ1 481 aaKnown RBP13.75□□□□□ -0.21
MSH5-202ENST00000375740 TLR9Q9NR96 1032 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 PNPLA3Q9NST1 481 aa13.75□□□□□ -0.21
MSH5-202ENST00000375740 GMPR2Q9P2T1 348 aaKnown RBP13.75□□□□□ -0.21
MSH5-202ENST00000375740 GLYATL1P3A0A0U1RQE8 302 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 MATN4O95460 622 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 CYBBP04839 570 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 SRCP12931 536 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 PMS2P3Q13401 168 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 MAP7D1Q3KQU3 841 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 EGFLAMQ63HQ2 1017 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 HMBOX1Q6NT76 420 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 C16orf87Q6PH81 154 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 TMEM26Q6ZUK4 368 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 CCDC149Q6ZUS6 474 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 EFL1Q7Z2Z2 1120 aaKnown RBP13.74□□□□□ -0.21
MSH5-202ENST00000375740 VOPP1Q96AW1 172 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 SLCO4A1Q96BD0 722 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 LMLNQ96KR4 655 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 OSBPL11Q9BXB4 747 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 GNPTGQ9UJJ9 305 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 TMEM98Q9Y2Y6 226 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 TSC22D4Q9Y3Q8 395 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 AP4S1Q9Y587 144 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 SOBPA7XYQ1 873 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 ANGPT2O15123 496 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 CCL16O15467 120 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 BMP10O95393 424 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 CLIC3O95833 236 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 ACRV1P26436 265 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 SERPINA4P29622 427 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 ZBED5Q49AG3 693 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 XKR7Q5GH72 579 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 TMEM214Q6NUQ4 689 aaKnown RBP13.74□□□□□ -0.21
MSH5-202ENST00000375740 BLOC1S3Q6QNY0 202 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 CYP2R1Q6VVX0 501 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 ZNF786Q8N393 782 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 PAWRQ96IZ0 340 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms