RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, human

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM2-208	ENST00000375661	NOA1	Q8NC60	698 aa	Known RBP	11.92	□□□□□ -0.5
LSM2-208	ENST00000375661	GPR26	Q8NDV2	337 aa		11.92	□□□□□ -0.5
LSM2-208	ENST00000375661	STAMBPL1	Q96FJ0	436 aa		11.92	□□□□□ -0.5
LSM2-208	ENST00000375661	C9orf72	Q96LT7	481 aa		11.92	□□□□□ -0.5
LSM2-208	ENST00000375661	AGAP2	Q99490	1192 aa		11.92	□□□□□ -0.5
LSM2-208	ENST00000375661	ERP44	Q9BS26	406 aa		11.92	□□□□□ -0.5
LSM2-208	ENST00000375661	LRRC1	Q9BTT6	524 aa		11.92	□□□□□ -0.5
LSM2-208	ENST00000375661	RIOK2	Q9BVS4	552 aa	Known RBP	11.92	□□□□□ -0.5
LSM2-208	ENST00000375661	CARD6	Q9BX69	1037 aa		11.92	□□□□□ -0.5
LSM2-208	ENST00000375661	TRIM31	Q9BZY9	425 aa		11.92	□□□□□ -0.5
LSM2-208	ENST00000375661	L2HGDH	Q9H9P8	463 aa		11.92	□□□□□ -0.5
LSM2-208	ENST00000375661	BPIFA1	Q9NP55	256 aa		11.92	□□□□□ -0.5
LSM2-208	ENST00000375661	CUEDC1	Q9NWM3	386 aa	Predicted RBP	11.92	□□□□□ -0.5
LSM2-208	ENST00000375661	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
LSM2-208	ENST00000375661	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	11.92	□□□□□ -0.5
LSM2-208	ENST00000375661	PLEKHB1	Q9UF11	243 aa	Predicted RBP	11.92	□□□□□ -0.5
LSM2-208	ENST00000375661	KLHL3	Q9UH77	587 aa		11.92	□□□□□ -0.5
LSM2-208	ENST00000375661	CROT	Q9UKG9	612 aa		11.92	□□□□□ -0.5
LSM2-208	ENST00000375661	KCNK6	Q9Y257	313 aa		11.92	□□□□□ -0.5
LSM2-208	ENST00000375661	SNX24	Q9Y343	169 aa		11.92	□□□□□ -0.5
LSM2-208	ENST00000375661	MRPS18B	Q9Y676	258 aa	Known RBP	11.92	□□□□□ -0.5
LSM2-208	ENST00000375661	SPTBN1	Q01082	2364 aa	Known RBP	11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	TNRC6A	Q8NDV7	1962 aa	Known RBP	11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	EFCAB8	A8MWE9	144 aa		11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	GPR89A	B7ZAQ6	455 aa		11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	GOLGA8M	H3BSY2	632 aa		11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	CREG1	O75629	220 aa		11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	AGFG2	O95081	481 aa		11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	CCNYL3	P0C7X3	344 aa		11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	GPR89B	P0CG08	455 aa		11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	ACP5	P13686	325 aa		11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	XRCC1	P18887	633 aa	Predicted RBP	11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	NR1D1	P20393	614 aa		11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	LPO	P22079	712 aa	Predicted RBP	11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	RPL21	P46778	160 aa	Known RBP	11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	ZNF140	P52738	457 aa	Predicted RBP	11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	SESN2	P58004	480 aa	Predicted RBP	11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	UBE2I	P63279	158 aa	Known RBP	11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	DUPD1	Q68J44	220 aa		11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	PHYKPL	Q8IUZ5	450 aa		11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	CEP112	Q8N8E3	955 aa		11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	MNS1	Q8NEH6	495 aa		11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	OR4K2	Q8NGD2	314 aa		11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	OR13C4	Q8NGS5	318 aa		11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	SERPINB12	Q96P63	405 aa		11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	RANBP9	Q96S59	729 aa		11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	TBC1D10A	Q9BXI6	508 aa		11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	FAM83D	Q9H4H8	585 aa		11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	ZNF768	Q9H5H4	540 aa	Known RBP	11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	TLK1	Q9UKI8	766 aa		11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	CNOT6	Q9ULM6	557 aa	Known RBP	11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	TEX15	Q9BXT5	2789 aa		11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	USP9X	Q93008	2570 aa	Predicted RBP	11.91	□□□□□ -0.5
LSM2-208	ENST00000375661	MROH6	A6NGR9	719 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	C2orf81	A6NN90	581 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	C21orf140	B9A014	251 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	BHMG1	C9JSJ3	638 aa	Predicted RBP	11.9	□□□□□ -0.5
LSM2-208	ENST00000375661		K7EM74	188 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	GAPDHS	O14556	408 aa	Predicted RBP	11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	STX7	O15400	261 aa	Known RBP	11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	GRID2	O43424	1007 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	NUAK1	O60285	661 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	SNX2	O60749	519 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	AVIL	O75366	819 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	SEC31A	O94979	1220 aa	Known RBP	11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	CRTAM	O95727	393 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	FGF5	P12034	268 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	MLN	P12872	115 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	ZNF28	P17035	718 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	ADRA1D	P25100	572 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	PSMA3	P25788	255 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	MGAT1	P26572	445 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	CA5A	P35218	305 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	NPY2R	P49146	381 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	ITGA8	P53708	1063 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	GFER	P55789	205 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	SARNP	P82979	210 aa	Known RBP	11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	TRADD	Q15628	312 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	CCDC38	Q502W7	563 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	HENMT1	Q5T8I9	393 aa	Known RBP	11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	ALS2CL	Q60I27	953 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	HIBCH	Q6NVY1	386 aa	Predicted RBP	11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	TMEM26	Q6ZUK4	368 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	MICALCL	Q6ZW33	695 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	PRSS42	Q7Z5A4	293 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	PCGF5	Q86SE9	256 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	HOOK3	Q86VS8	718 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	RASGRP3	Q8IV61	690 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	AGGF1	Q8N302	714 aa	eCLIP	11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	GALNT6	Q8NCL4	622 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	LRRN4CL	Q8ND94	238 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	SSC4D	Q8WTU2	575 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	SNF8	Q96H20	258 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	FCRL4	Q96PJ5	515 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	PLEKHG4B	Q96PX9	1271 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	OR6C1	Q96RD1	312 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	DPH5	Q9H2P9	285 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	IL26	Q9NPH9	171 aa		11.9	□□□□□ -0.5
LSM2-208	ENST00000375661	RAD18	Q9NS91	495 aa		11.9	□□□□□ -0.5

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