RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 ZNF490Q9ULM2 529 aaPredicted RBP11.61□□□□□ -0.55
MCF2L-202ENST00000375597 RAI2Q9Y5P3 530 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 GPR45Q9Y5Y3 372 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 PTCH2Q9Y6C5 1203 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 AQP12BA6NM10 295 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 SH3BP5O60239 455 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 PGLSO95336 258 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 GJB5O95377 273 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 ANGPTL1O95841 491 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 LCKP06239 509 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 PKMP14618 531 aaKnown RBP11.6□□□□□ -0.55
MCF2L-202ENST00000375597 RAPSNQ13702 412 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 HMGN2P46Q86SG4 172 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 AQP12AQ8IXF9 295 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 TMEM86AQ8N2M4 240 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 C2orf73Q8N5S3 287 aaPredicted RBP11.6□□□□□ -0.55
MCF2L-202ENST00000375597 ZBTB8BQ8NAP8 495 aaPredicted RBP11.6□□□□□ -0.55
MCF2L-202ENST00000375597 ATOH8Q96SQ7 321 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 HEPHQ9BQS7 1158 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 INPP5KQ9BT40 448 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 SYTL2Q9HCH5 934 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 SYNDIG1LA6NDD5 238 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 PSMD11O00231 422 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 RHOCP08134 193 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 ATXN1LP0C7T5 689 aaKnown RBP11.6□□□□□ -0.55
MCF2L-202ENST00000375597 WEE1P30291 646 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 AXLP30530 894 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 SCNN1AP37088 669 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 CPT1AP50416 773 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 SGSHP51688 502 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 RPS3AP61247 264 aaKnown RBP11.6□□□□□ -0.55
MCF2L-202ENST00000375597 LRRC74AQ0VAA2 488 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 CCDC103Q8IW40 242 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 FAM217AQ8IXS0 508 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 TMEM199Q8N511 208 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 ARRDC2Q8TBH0 407 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 PTPN18Q99952 460 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 ASB8Q9H765 288 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 MTRRQ9UBK8 725 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 UBA2Q9UBT2 640 aaPredicted RBP11.6□□□□□ -0.55
MCF2L-202ENST00000375597 PCDHGA11Q9Y5H2 935 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 PABPN1LA6NDY0 278 aaKnown RBP11.6□□□□□ -0.55
MCF2L-202ENST00000375597 TFECO14948 347 aaPredicted RBP11.6□□□□□ -0.55
MCF2L-202ENST00000375597 SEC24AO95486 1093 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 VIPP01282 170 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 PBLDP30039 288 aaPredicted RBP11.6□□□□□ -0.55
MCF2L-202ENST00000375597 DMC1Q14565 340 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 PHKG1Q16816 387 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 ZNF829Q3KNS6 432 aaPredicted RBP11.6□□□□□ -0.55
MCF2L-202ENST00000375597 SPOUT1Q5T280 376 aaKnown RBP11.6□□□□□ -0.55
MCF2L-202ENST00000375597 RNF219Q5W0B1 726 aaPredicted RBP11.6□□□□□ -0.55
MCF2L-202ENST00000375597 CES5AQ6NT32 575 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 GLB1LQ6UWU2 654 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 Q6ZSR9 355 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 KIAA0408Q6ZU52 694 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 HORMAD1Q86X24 394 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 ATP6V0D2Q8N8Y2 350 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 POC5Q8NA72 575 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 FOXJ1Q92949 421 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.6□□□□□ -0.552e-6■■■■■ 55.9
MCF2L-202ENST00000375597 DMRTB1Q96MA1 342 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 YIPF2Q9BWQ6 316 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 LRRC3Q9BY71 257 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 ALOXE3Q9BYJ1 711 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 CRLS1Q9UJA2 301 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 PCDHA9Q9Y5H5 950 aa11.6□□□□□ -0.55
MCF2L-202ENST00000375597 KRBA1A5PL33 1030 aa11.59□□□□□ -0.55
MCF2L-202ENST00000375597 BCKDKO14874 412 aa11.59□□□□□ -0.55
MCF2L-202ENST00000375597 SLC25A14O95258 325 aaPredicted RBP11.59□□□□□ -0.55
MCF2L-202ENST00000375597 AKT1P31749 480 aa11.59□□□□□ -0.55
MCF2L-202ENST00000375597 NR4A2P43354 598 aa11.59□□□□□ -0.55
MCF2L-202ENST00000375597 HCAR3P49019 387 aa11.59□□□□□ -0.55
MCF2L-202ENST00000375597 TCEA2Q15560 299 aa11.59□□□□□ -0.55
MCF2L-202ENST00000375597 CRY1Q16526 586 aa11.59□□□□□ -0.55
MCF2L-202ENST00000375597 SLC22A16Q86VW1 577 aa11.59□□□□□ -0.55
MCF2L-202ENST00000375597 GATAD2AQ86YP4 633 aa11.59□□□□□ -0.55
MCF2L-202ENST00000375597 CNTN4Q8IWV2 1026 aa11.59□□□□□ -0.55
MCF2L-202ENST00000375597 SPPL2AQ8TCT8 520 aa11.59□□□□□ -0.55
MCF2L-202ENST00000375597 MAL2Q969L2 176 aa11.59□□□□□ -0.55
MCF2L-202ENST00000375597 MTERF1Q99551 399 aaKnown RBP11.59□□□□□ -0.55
MCF2L-202ENST00000375597 AMBRA1Q9C0C7 1298 aa11.59□□□□□ -0.55
MCF2L-202ENST00000375597 REXO4Q9GZR2 422 aaKnown RBP11.59□□□□□ -0.55
MCF2L-202ENST00000375597 CLPBQ9H078 707 aa11.59□□□□□ -0.55
MCF2L-202ENST00000375597 AGO1Q9UL18 857 aaKnown RBP11.59□□□□□ -0.55
MCF2L-202ENST00000375597 CXCR6O00574 342 aa11.59□□□□□ -0.55
MCF2L-202ENST00000375597 INSIG1O15503 277 aa11.59□□□□□ -0.55
MCF2L-202ENST00000375597 GPIP06744 558 aa11.59□□□□□ -0.55
MCF2L-202ENST00000375597 ELNP15502 786 aa11.59□□□□□ -0.55
MCF2L-202ENST00000375597 FDXRP22570 491 aa11.59□□□□□ -0.55
MCF2L-202ENST00000375597 MSANTD2Q6P1R3 559 aa11.59□□□□□ -0.55
MCF2L-202ENST00000375597 DOK6Q6PKX4 331 aa11.59□□□□□ -0.55
MCF2L-202ENST00000375597 NCCRP1Q6ZVX7 275 aaPredicted RBP11.59□□□□□ -0.55
MCF2L-202ENST00000375597 GOLGA7Q7Z5G4 137 aa11.59□□□□□ -0.55
MCF2L-202ENST00000375597 NECAB2Q7Z6G3 386 aa11.59□□□□□ -0.55
MCF2L-202ENST00000375597 SPARTQ8N0X7 666 aa11.59□□□□□ -0.55
MCF2L-202ENST00000375597 NETO1Q8TDF5 533 aa11.59□□□□□ -0.55
MCF2L-202ENST00000375597 NSMCE3Q96MG7 304 aa11.59□□□□□ -0.55
MCF2L-202ENST00000375597 ACBD6Q9BR61 282 aa11.59□□□□□ -0.55
MCF2L-202ENST00000375597 TRMOQ9BU70 441 aa11.59□□□□□ -0.55
MCF2L-202ENST00000375597 PRRG3Q9BZD7 231 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms