RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 GPR33Q49SQ1 333 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 FSTL5Q8N475 847 aaPredicted RBP10.05□□□□□ -0.8
PTCH1-204ENST00000375290 ZNF641Q96N77 438 aaPredicted RBP10.05□□□□□ -0.8
PTCH1-204ENST00000375290 MFSD1Q9H3U5 465 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 ZFP14Q9HCL3 533 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 PLCL2Q9UPR0 1127 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 SPATA31A5Q5VU36 1347 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 SPATA31A7Q8IWB4 1347 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 SMSP52788 366 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 PLIN5Q00G26 463 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 RHEBQ15382 184 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 ELMO1Q92556 727 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 TSR3Q9UJK0 312 aaKnown RBP10.05□□□□□ -0.8
PTCH1-204ENST00000375290 ZNF490Q9ULM2 529 aaPredicted RBP10.05□□□□□ -0.8
PTCH1-204ENST00000375290 CCRL2O00421 344 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 HTR2AP28223 471 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 YAP1P46937 504 aaKnown RBP10.05□□□□□ -0.8
PTCH1-204ENST00000375290 IL10RBQ08334 325 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 DSG2Q14126 1118 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 KANK2Q63ZY3 851 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 TOMM5Q8N4H5 51 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 SNX10Q9Y5X0 201 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 ANKRD63C9JTQ0 380 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 TOP3BO95985 862 aaKnown RBP10.05□□□□□ -0.8
PTCH1-204ENST00000375290 CTPS1P17812 591 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 PLEKHG7Q6ZR37 379 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 CLCC1Q96S66 551 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 BTBD1Q9H0C5 482 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 ARPC2O15144 300 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 MYF6P23409 242 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 FOXN2P32314 431 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 SLC1A2P43004 574 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 MANFP55145 182 aaKnown RBP10.04□□□□□ -0.8
PTCH1-204ENST00000375290 LSM3P62310 102 aaKnown RBP10.04□□□□□ -0.8
PTCH1-204ENST00000375290 KLHL24Q6TFL4 600 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 MOAP1Q96BY2 351 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 PHOX2BQ99453 314 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 DOLKQ9UPQ8 538 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 RXRBP28702 533 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 VMACQ2NL98 169 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 ZBTB2Q8N680 514 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 GDPD1Q8N9F7 314 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 TCEAL4Q96EI5 215 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 FBXL18Q96ME1 805 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 SEMA3CQ99985 751 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 AIFM2Q9BRQ8 373 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 ULBP1Q9BZM6 244 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 NUFIP1Q9UHK0 495 aaKnown RBP10.04□□□□□ -0.8
PTCH1-204ENST00000375290 MT-CO1P00395 513 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 ICAM3P32942 547 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 EIF2DP41214 584 aaKnown RBP10.04□□□□□ -0.8
PTCH1-204ENST00000375290 NPTX1Q15818 432 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 CELF3Q5SZQ8 465 aaKnown RBP10.04□□□□□ -0.8
PTCH1-204ENST00000375290 SH3PXD2AQ5TCZ1 1133 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 PLEKHH3Q7Z736 793 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 GATAD2AQ86YP4 633 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 ADAM32Q8TC27 787 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 GON7Q9BXV9 100 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 BRD9Q9H8M2 597 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 POLR3BQ9NW08 1133 aaPredicted RBP10.04□□□□□ -0.8
PTCH1-204ENST00000375290 POLR1DQ9Y2S0 133 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 CDH10Q9Y6N8 788 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 GTF2H2Q13888 395 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 GTF2H2CQ6P1K8 395 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 ZNF730Q6ZMV8 503 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 OR4C6Q8NH72 309 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 PCDHB18PQ96TA0 734 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 TMEM27Q9HBJ8 222 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 ITM2CQ9NQX7 267 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 AGO1Q9UL18 857 aaKnown RBP10.04□□□□□ -0.8
PTCH1-204ENST00000375290 MSCO60682 206 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 XYLBO75191 536 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 OAS1P00973 400 aaKnown RBP10.04□□□□□ -0.8
PTCH1-204ENST00000375290 KHKP50053 298 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 CRISP3P54108 245 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 CXCR4P61073 352 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 PON3Q15166 354 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 PLA2G4EQ3MJ16 856 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 CDCA2Q69YH5 1023 aaPredicted RBP10.04□□□□□ -0.8
PTCH1-204ENST00000375290 CMC1Q7Z7K0 106 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 WDR18Q9BV38 432 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 POLR2J2Q9GZM3 115 aaKnown RBP10.04□□□□□ -0.8
PTCH1-204ENST00000375290 AGO3Q9H9G7 860 aaKnown RBP10.04□□□□□ -0.8
PTCH1-204ENST00000375290 ARHGEF4Q9NR80 690 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 EXOSC1Q9Y3B2 195 aaKnown RBP10.04□□□□□ -0.8
PTCH1-204ENST00000375290 HTRA2O43464 458 aaPredicted RBP10.04□□□□□ -0.8
PTCH1-204ENST00000375290 NPR2P20594 1047 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 IKBKEQ14164 716 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 OLFML2AQ68BL7 652 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 AADACL2Q6P093 401 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 CEP76Q8TAP6 659 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 TRPM4Q8TD43 1214 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 MYNNQ9NPC7 610 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 ERVW-1Q9UQF0 538 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 ATP6AP2A0A1C7CYW4 349 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 TSPAN4O14817 238 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 ACTC1P68032 377 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 ACTA1P68133 377 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 SP140Q13342 867 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 DLG2Q15700 870 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms