RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 HAUS8Q9BT25 410 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 SPAG4Q9NPE6 437 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 CCDC177Q9NQR7 707 aaPredicted RBP8.08□□□□□ -1.12
UBR4-202ENST00000375224 SUCOQ9UBS9 1254 aaKnown RBP8.08□□□□□ -1.12
UBR4-202ENST00000375224 IKZF3Q9UKT9 509 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 CLEC4EQ9ULY5 219 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 ATP6AP2A0A1C7CYW4 349 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 FUOMA2VDF0 154 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 LRRC14BA6NHZ5 514 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 NCF1BA6NI72 391 aaPredicted RBP8.08□□□□□ -1.12
UBR4-202ENST00000375224 NCF1CA8MVU1 366 aaPredicted RBP8.08□□□□□ -1.12
UBR4-202ENST00000375224 PEX1O43933 1283 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 ATP6AP2O75787 350 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 HNRNPA1P09651 372 aaKnown RBP eCLIP8.08□□□□□ -1.12
UBR4-202ENST00000375224 NCF1P14598 390 aaPredicted RBP8.08□□□□□ -1.12
UBR4-202ENST00000375224 GPX3P22352 226 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 NSG1P42857 185 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 RECQLP46063 649 aaPredicted RBP8.08□□□□□ -1.12
UBR4-202ENST00000375224 BCAP31P51572 246 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 SPATS1Q496A3 300 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 SAMD4BQ5PRF9 694 aaKnown RBP8.08□□□□□ -1.12
UBR4-202ENST00000375224 CYHR1Q6ZMK1 362 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 NXPE1Q8N323 547 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 HIPK4Q8NE63 616 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 SP7Q8TDD2 431 aaPredicted RBP8.08□□□□□ -1.12
UBR4-202ENST00000375224 SLC22A17Q8WUG5 538 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 IRF7Q92985 503 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 ASB9Q96DX5 294 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 C3orf30Q96M34 536 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 GPATCH1Q9BRR8 931 aaKnown RBP8.08□□□□□ -1.12
UBR4-202ENST00000375224 SLC2A11Q9BYW1 496 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 LATS2Q9NRM7 1088 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 TDP1Q9NUW8 608 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 DPP7Q9UHL4 492 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 TMCC3Q9ULS5 477 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 SLC8A2Q9UPR5 921 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 ANKRD34BA5PLL1 514 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 AGAP14A8MT82 685 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 GAPDHSO14556 408 aaPredicted RBP8.08□□□□□ -1.12
UBR4-202ENST00000375224 SLC9A3R1O14745 358 aaPredicted RBP8.08□□□□□ -1.12
UBR4-202ENST00000375224 CASQ2O14958 399 aaPredicted RBP8.08□□□□□ -1.12
UBR4-202ENST00000375224 KMOO15229 486 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 TRMUO75648 421 aaKnown RBP8.08□□□□□ -1.12
UBR4-202ENST00000375224 OR6B1O95007 311 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 SLC25A14O95258 325 aaPredicted RBP8.08□□□□□ -1.12
UBR4-202ENST00000375224 CLPTM1O96005 669 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 PABPC1P11940 636 aaKnown RBP8.08□□□□□ -1.12
UBR4-202ENST00000375224 HGFP14210 728 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 HLA-FP30511 346 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 CTNNB1P35222 781 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 RPL5P46777 297 aaKnown RBP8.08□□□□□ -1.12
UBR4-202ENST00000375224 ERVFC1P60507 584 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 ECT2LQ008S8 904 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 CEACAM7Q14002 265 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 PTPRRQ15256 657 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 CHRNA6Q15825 494 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 PLPP4Q5VZY2 271 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 TTC23LQ6PF05 361 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 PSRC1Q6PGN9 363 aaPredicted RBP8.08□□□□□ -1.12
UBR4-202ENST00000375224 ZBTB2Q8N680 514 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 EFCAB3Q8N7B9 438 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 PDPRQ8NCN5 879 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 MCCC1Q96RQ3 725 aaPredicted RBP8.08□□□□□ -1.12
UBR4-202ENST00000375224 ECSITQ9BQ95 431 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 TMEM106CQ9BVX2 250 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 BBS2Q9BXC9 721 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 ZDHHC3Q9NYG2 299 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 POLG2Q9UHN1 485 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 OARD1Q9Y530 152 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 PCDHGA7Q9Y5G6 932 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 SCN8AQ9UQD0 1980 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 E2F3O00716 465 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 PPP6CO00743 305 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 ANGPT2O15123 496 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 ADAM23O75077 832 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 SORBS2O94875 1100 aaKnown RBP8.07□□□□□ -1.12
UBR4-202ENST00000375224 PGM3O95394 542 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 ALDOCP09972 364 aaKnown RBP8.07□□□□□ -1.12
UBR4-202ENST00000375224 LINC00032P0C843 101 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 CYP2A6P11509 494 aaPredicted RBP8.07□□□□□ -1.12
UBR4-202ENST00000375224 TCF3P15923 654 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 XRCC1P18887 633 aaPredicted RBP8.07□□□□□ -1.12
UBR4-202ENST00000375224 NNMTP40261 264 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 HK3P52790 923 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 FOXA1P55317 472 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 FPGSQ05932 587 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 TRIM25Q14258 630 aaKnown RBP8.07□□□□□ -1.12
UBR4-202ENST00000375224 FUT11Q495W5 492 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 CEP78Q5JTW2 689 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 SIGIRRQ6IA17 410 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 CRTC1Q6UUV9 634 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 SYVN1Q86TM6 617 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 PHYKPLQ8IUZ5 450 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 SAMD14Q8IZD0 417 aaPredicted RBP8.07□□□□□ -1.12
UBR4-202ENST00000375224 HMGCLL1Q8TB92 370 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 PHOSPHO2Q8TCD6 241 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 MED30Q96HR3 178 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 RPL10LQ96L21 214 aaKnown RBP8.07□□□□□ -1.12
UBR4-202ENST00000375224 TLR9Q9NR96 1032 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 SPHK2Q9NRA0 654 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms