RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 CCR10P46092 362 aa20.88■□□□□ 0.93
TGFBR1-202ENST00000374994 IKBKEQ14164 716 aa20.88■□□□□ 0.93
TGFBR1-202ENST00000374994 NPTX1Q15818 432 aa20.88■□□□□ 0.93
TGFBR1-202ENST00000374994 CDCA2Q69YH5 1023 aaPredicted RBP20.88■□□□□ 0.93
TGFBR1-202ENST00000374994 PQLC3Q8N755 202 aa20.88■□□□□ 0.93
TGFBR1-202ENST00000374994 SIDT2Q8NBJ9 832 aaKnown RBP20.88■□□□□ 0.93
TGFBR1-202ENST00000374994 PSMG2Q969U7 264 aa20.88■□□□□ 0.93
TGFBR1-202ENST00000374994 TMBIM1Q969X1 311 aa20.88■□□□□ 0.93
TGFBR1-202ENST00000374994 TWNKQ96RR1 684 aa20.88■□□□□ 0.93
TGFBR1-202ENST00000374994 RPL36Q9Y3U8 105 aaKnown RBP20.88■□□□□ 0.93
TGFBR1-202ENST00000374994 FMN2Q9NZ56 1722 aa20.88■□□□□ 0.93
TGFBR1-202ENST00000374994 HMGB3O15347 200 aaKnown RBP20.88■□□□□ 0.93
TGFBR1-202ENST00000374994 DNAJB5O75953 348 aa20.88■□□□□ 0.93
TGFBR1-202ENST00000374994 C12orf43Q96C57 262 aaKnown RBP20.88■□□□□ 0.93
TGFBR1-202ENST00000374994 FUBP3Q96I24 572 aaKnown RBP eCLIP20.88■□□□□ 0.931e-6■■■■■ 31.3
TGFBR1-202ENST00000374994 MED28Q9H204 178 aa20.88■□□□□ 0.93
TGFBR1-202ENST00000374994 ANKRA2Q9H9E1 313 aa20.88■□□□□ 0.93
TGFBR1-202ENST00000374994 MRM3Q9HC36 420 aaKnown RBP20.88■□□□□ 0.93
TGFBR1-202ENST00000374994 ZNF214Q9UL59 606 aaPredicted RBP20.88■□□□□ 0.93
TGFBR1-202ENST00000374994 K7EPI3 171 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 NOBOXO60393 691 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 NRLP54845 237 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 TUBA3EQ6PEY2 450 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 SRFBP1Q8NEF9 429 aaKnown RBP20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 CLEC4CQ8WTT0 213 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 NEK6Q9HC98 313 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 ZNF541Q9H0D2 1346 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 MYBPHLA2RUH7 354 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 H3BM21 787 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 KLHL18O94889 574 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 CCNDBP1O95273 360 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 PGLSO95336 258 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 GAD2Q05329 585 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 C2orf80Q0P641 193 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 BEND7Q8N7W2 519 aaPredicted RBP20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 DCBLD1Q8N8Z6 715 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 STX16-NPEPL1H3BU86 382 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 hCG_2039718K7EN88 272 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 ELFN1P0C7U0 828 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 SSR2P43308 183 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 SYNDIG1Q9H7V2 258 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 AKAP12Q02952 1782 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 CLPXO76031 633 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 OMPP47874 163 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 KLHL22Q53GT1 634 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 CLEC20AQ6ZU45 233 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 TBX1O43435 398 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 CORO1AP31146 461 aaKnown RBP20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 CHPFQ8IZ52 775 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 AP2M1Q96CW1 435 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 PREBQ9HCU5 417 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 NCKAP1Q9Y2A7 1128 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 HTRA2O43464 458 aaPredicted RBP20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 PENKP01210 267 aaPredicted RBP20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 AHSGP02765 367 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 CCNIQ14094 377 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 PRAMEF19Q5SWL8 479 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 STON2Q8WXE9 905 aa20.87■□□□□ 0.93
TGFBR1-202ENST00000374994 XRN1Q8IZH2 1706 aaKnown RBP20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 FAM92AA1XBS5 289 aa20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 PRPS1L1P21108 318 aa20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 NSG1P42857 185 aa20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 CCR4P51679 360 aa20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 TARBP2Q15633 366 aaKnown RBP20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 TIGD6Q17RP2 521 aa20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 ZBTB8BQ8NAP8 495 aaPredicted RBP20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 GPR88Q9GZN0 384 aa20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 LSM1O15116 133 aaKnown RBP20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 GALNT2Q10471 571 aa20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 NAE1Q13564 534 aa20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 MSANTD2Q6P1R3 559 aa20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 CALML5Q9NZT1 146 aa20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 OR5F1O95221 314 aa20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 SRPRAP08240 638 aaKnown RBP20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 AP3S2P59780 193 aa20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 ZNF730Q6ZMV8 503 aa20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 TMPRSS11BQ86T26 416 aa20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 C11orf24Q96F05 449 aaPredicted RBP20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 PCDHGA10Q9Y5H3 936 aa20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 VARSP26640 1264 aaKnown RBP20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 ALDH4A1P30038 563 aa20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 RORCP51449 518 aa20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 CLCNKBP51801 687 aa20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 ABATP80404 500 aa20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 S100A13Q99584 98 aa20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 PDLIM1O00151 329 aa20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 STARP49675 285 aa20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 PTGES3Q15185 160 aaKnown RBP20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 FAM46CQ5VWP2 391 aa20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 MAP1SQ66K74 1059 aaPredicted RBP20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 PLD4Q96BZ4 506 aa20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 SLC29A3Q9BZD2 475 aa20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 IL1RAPQ9NPH3 570 aa20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 CNOT11Q9UKZ1 510 aaKnown RBP20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 TESMINQ9Y4I5 508 aa20.86■□□□□ 0.93
TGFBR1-202ENST00000374994 ABCB7O75027 752 aa20.85■□□□□ 0.93
TGFBR1-202ENST00000374994 CDH15P55291 814 aa20.85■□□□□ 0.93
TGFBR1-202ENST00000374994 IQCCQ4KMZ1 466 aa20.85■□□□□ 0.93
TGFBR1-202ENST00000374994 GOLM1Q8NBJ4 401 aa20.85■□□□□ 0.93
TGFBR1-202ENST00000374994 ADAMTS15Q8TE58 950 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms