RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 RASGRP3Q8IV61 690 aa17.66■□□□□ 0.42
HLA-DQB1-201ENST00000374943 MIER2Q8N344 545 aa17.66■□□□□ 0.42
HLA-DQB1-201ENST00000374943 CDYL2Q8N8U2 506 aa17.66■□□□□ 0.42
HLA-DQB1-201ENST00000374943 ASB11Q8WXH4 323 aa17.66■□□□□ 0.42
HLA-DQB1-201ENST00000374943 GLYATL1Q969I3 302 aa17.66■□□□□ 0.42
HLA-DQB1-201ENST00000374943 PPP1R16AQ96I34 528 aa17.66■□□□□ 0.42
HLA-DQB1-201ENST00000374943 FAM129BQ96TA1 746 aa17.66■□□□□ 0.42
HLA-DQB1-201ENST00000374943 NPAS2Q99743 824 aa17.66■□□□□ 0.42
HLA-DQB1-201ENST00000374943 IPPKQ9H8X2 491 aa17.66■□□□□ 0.42
HLA-DQB1-201ENST00000374943 CACNA2D2Q9NY47 1150 aa17.66■□□□□ 0.42
HLA-DQB1-201ENST00000374943 FBP2O00757 339 aa17.65■□□□□ 0.42
HLA-DQB1-201ENST00000374943 ANXA5P08758 320 aa17.65■□□□□ 0.42
HLA-DQB1-201ENST00000374943 GJA4P35212 333 aa17.65■□□□□ 0.42
HLA-DQB1-201ENST00000374943 PSMD8P48556 350 aa17.65■□□□□ 0.42
HLA-DQB1-201ENST00000374943 CREB5Q02930 508 aa17.65■□□□□ 0.42
HLA-DQB1-201ENST00000374943 SLC34A1Q06495 639 aa17.65■□□□□ 0.42
HLA-DQB1-201ENST00000374943 ACOX1Q15067 660 aa17.65■□□□□ 0.42
HLA-DQB1-201ENST00000374943 KIF19Q2TAC6 998 aa17.65■□□□□ 0.42
HLA-DQB1-201ENST00000374943 SERPINA13PQ6UXR4 307 aa17.65■□□□□ 0.42
HLA-DQB1-201ENST00000374943 FUNDC1Q8IVP5 155 aa17.65■□□□□ 0.42
HLA-DQB1-201ENST00000374943 OR4F6Q8NGB9 312 aa17.65■□□□□ 0.42
HLA-DQB1-201ENST00000374943 AP2M1Q96CW1 435 aa17.65■□□□□ 0.42
HLA-DQB1-201ENST00000374943 PARVBQ9HBI1 364 aa17.65■□□□□ 0.42
HLA-DQB1-201ENST00000374943 AIG1Q9NVV5 245 aa17.65■□□□□ 0.42
HLA-DQB1-201ENST00000374943 TMEM45AQ9NWC5 275 aa17.65■□□□□ 0.42
HLA-DQB1-201ENST00000374943 THAP10Q9P2Z0 257 aaPredicted RBP17.65■□□□□ 0.42
HLA-DQB1-201ENST00000374943 GIMAP2Q9UG22 337 aa17.65■□□□□ 0.42
HLA-DQB1-201ENST00000374943 PDE10AQ9Y233 779 aa17.65■□□□□ 0.42
HLA-DQB1-201ENST00000374943 ITM2BQ9Y287 266 aa17.65■□□□□ 0.42
HLA-DQB1-201ENST00000374943 C15orf41Q9Y2V0 281 aa17.65■□□□□ 0.42
HLA-DQB1-201ENST00000374943 GPR45Q9Y5Y3 372 aa17.65■□□□□ 0.42
HLA-DQB1-201ENST00000374943 A0A1W2PPC1 479 aa17.64■□□□□ 0.42
HLA-DQB1-201ENST00000374943 GFYI3L273 518 aa17.64■□□□□ 0.42
HLA-DQB1-201ENST00000374943 SOX1O00570 391 aaPredicted RBP17.64■□□□□ 0.42
HLA-DQB1-201ENST00000374943 NRP2O60462 931 aa17.64■□□□□ 0.42
HLA-DQB1-201ENST00000374943 TBX10O75333 385 aa17.64■□□□□ 0.42
HLA-DQB1-201ENST00000374943 CAPN1P07384 714 aa17.64■□□□□ 0.42
HLA-DQB1-201ENST00000374943 PTDSS1P48651 473 aaKnown RBP17.64■□□□□ 0.42
HLA-DQB1-201ENST00000374943 RPIAP49247 311 aa17.64■□□□□ 0.42
HLA-DQB1-201ENST00000374943 ERVK-8P63133 956 aa17.64■□□□□ 0.42
HLA-DQB1-201ENST00000374943 HSPA14Q0VDF9 509 aa17.64■□□□□ 0.42
HLA-DQB1-201ENST00000374943 CCNIQ14094 377 aa17.64■□□□□ 0.42
HLA-DQB1-201ENST00000374943 PAOXQ6QHF9 649 aa17.64■□□□□ 0.42
HLA-DQB1-201ENST00000374943 UBE2R2Q712K3 238 aaPredicted RBP17.64■□□□□ 0.42
HLA-DQB1-201ENST00000374943 OR9I1Q8NGQ6 314 aa17.64■□□□□ 0.42
HLA-DQB1-201ENST00000374943 OR2T11Q8NH01 316 aa17.64■□□□□ 0.42
HLA-DQB1-201ENST00000374943 METTL6Q8TCB7 284 aa17.64■□□□□ 0.42
HLA-DQB1-201ENST00000374943 TSPEARQ8WU66 669 aa17.64■□□□□ 0.42
HLA-DQB1-201ENST00000374943 CDK15Q96Q40 435 aa17.64■□□□□ 0.42
HLA-DQB1-201ENST00000374943 CDRT15Q96T59 188 aa17.64■□□□□ 0.42
HLA-DQB1-201ENST00000374943 NTMT1Q9BV86 223 aa17.64■□□□□ 0.42
HLA-DQB1-201ENST00000374943 TRIM54Q9BYV2 358 aa17.64■□□□□ 0.42
HLA-DQB1-201ENST00000374943 BRINP2Q9C0B6 783 aa17.64■□□□□ 0.42
HLA-DQB1-201ENST00000374943 TRPS1Q9UHF7 1281 aa17.64■□□□□ 0.42
HLA-DQB1-201ENST00000374943 ANGPTL2Q9UKU9 493 aa17.64■□□□□ 0.42
HLA-DQB1-201ENST00000374943 RANBP2P49792 3224 aaKnown RBP17.64■□□□□ 0.42
HLA-DQB1-201ENST00000374943 LINC01565O15544 149 aa17.64■□□□□ 0.41
HLA-DQB1-201ENST00000374943 MTX2O75431 263 aa17.64■□□□□ 0.41
HLA-DQB1-201ENST00000374943 STK16O75716 305 aa17.64■□□□□ 0.41
HLA-DQB1-201ENST00000374943 SLCO2B1O94956 709 aa17.64■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ADRB3P13945 408 aa17.64■□□□□ 0.41
HLA-DQB1-201ENST00000374943 PRLHRP49683 370 aa17.64■□□□□ 0.41
HLA-DQB1-201ENST00000374943 HNMTP50135 292 aa17.64■□□□□ 0.41
HLA-DQB1-201ENST00000374943 METAP1P53582 386 aa17.64■□□□□ 0.41
HLA-DQB1-201ENST00000374943 AP2B1P63010 937 aa17.64■□□□□ 0.41
HLA-DQB1-201ENST00000374943 CCDC6Q16204 474 aa17.64■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ZNF423Q2M1K9 1284 aa17.64■□□□□ 0.41
HLA-DQB1-201ENST00000374943 MMEL1Q495T6 779 aa17.64■□□□□ 0.41
HLA-DQB1-201ENST00000374943 TMEM52BQ4KMG9 183 aa17.64■□□□□ 0.41
HLA-DQB1-201ENST00000374943 COQ5Q5HYK3 327 aa17.64■□□□□ 0.41
HLA-DQB1-201ENST00000374943 C8orf82Q6P1X6 216 aaPredicted RBP17.64■□□□□ 0.41
HLA-DQB1-201ENST00000374943 FBXL19Q6PCT2 694 aa17.64■□□□□ 0.41
HLA-DQB1-201ENST00000374943 LRRC70Q7Z2Q7 622 aa17.64■□□□□ 0.41
HLA-DQB1-201ENST00000374943 MILR1Q7Z6M3 343 aa17.64■□□□□ 0.41
HLA-DQB1-201ENST00000374943 DSG4Q86SJ6 1040 aa17.64■□□□□ 0.41
HLA-DQB1-201ENST00000374943 SFTPA1Q8IWL2 248 aa17.64■□□□□ 0.41
HLA-DQB1-201ENST00000374943 YAF2Q8IY57 180 aa17.64■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ASZ1Q8WWH4 475 aa17.64■□□□□ 0.41
HLA-DQB1-201ENST00000374943 SUSD6Q92537 303 aa17.64■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ELMO1Q92556 727 aa17.64■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ATP6V1E2Q96A05 226 aa17.64■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ELSPBP1Q96BH3 223 aa17.64■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ACOX2Q99424 681 aa17.64■□□□□ 0.41
HLA-DQB1-201ENST00000374943 EPHX3Q9H6B9 360 aa17.64■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ANGPTL3Q9Y5C1 460 aa17.64■□□□□ 0.41
HLA-DQB1-201ENST00000374943 TBC1D3BA6NDS4 549 aa17.63■□□□□ 0.41
HLA-DQB1-201ENST00000374943 MRASO14807 208 aa17.63■□□□□ 0.41
HLA-DQB1-201ENST00000374943 SORBS2O94875 1100 aaKnown RBP17.63■□□□□ 0.41
HLA-DQB1-201ENST00000374943 WDR47O94967 919 aa17.63■□□□□ 0.41
HLA-DQB1-201ENST00000374943 EBLN1P0CF75 366 aa17.63■□□□□ 0.41
HLA-DQB1-201ENST00000374943 PSMC3P17980 439 aa17.63■□□□□ 0.41
HLA-DQB1-201ENST00000374943 DPP6P42658 865 aa17.63■□□□□ 0.41
HLA-DQB1-201ENST00000374943 THOP1P52888 689 aa17.63■□□□□ 0.41
HLA-DQB1-201ENST00000374943 AP1S2P56377 157 aa17.63■□□□□ 0.41
HLA-DQB1-201ENST00000374943 PSME3P61289 254 aa17.63■□□□□ 0.41
HLA-DQB1-201ENST00000374943 BOP1Q14137 746 aaKnown RBP17.63■□□□□ 0.41
HLA-DQB1-201ENST00000374943 PDCD4Q53EL6 469 aaKnown RBP17.63■□□□□ 0.41
HLA-DQB1-201ENST00000374943 TCHHL1Q5QJ38 904 aaPredicted RBP17.63■□□□□ 0.41
HLA-DQB1-201ENST00000374943 NAIF1Q69YI7 327 aaPredicted RBP17.63■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ADGRG6Q86SQ4 1221 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms