RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 DUX1O43812 170 aa20.49■□□□□ 0.87
MAP1LC3A-202ENST00000374837 MPSTP25325 297 aa20.49■□□□□ 0.87
MAP1LC3A-202ENST00000374837 CCKBRP32239 447 aa20.49■□□□□ 0.87
MAP1LC3A-202ENST00000374837 CD151P48509 253 aa20.49■□□□□ 0.87
MAP1LC3A-202ENST00000374837 PDIA2Q13087 525 aaKnown RBP20.49■□□□□ 0.87
MAP1LC3A-202ENST00000374837 CBLBQ13191 982 aa20.49■□□□□ 0.87
MAP1LC3A-202ENST00000374837 CTBP1Q13363 440 aa20.49■□□□□ 0.87
MAP1LC3A-202ENST00000374837 BOP1Q14137 746 aaKnown RBP20.49■□□□□ 0.87
MAP1LC3A-202ENST00000374837 RTP5Q14D33 572 aa20.49■□□□□ 0.87
MAP1LC3A-202ENST00000374837 TRADDQ15628 312 aa20.49■□□□□ 0.87
MAP1LC3A-202ENST00000374837 HSP90AA5PQ58FG0 334 aa20.49■□□□□ 0.87
MAP1LC3A-202ENST00000374837 CTSL3PQ5NE16 218 aa20.49■□□□□ 0.87
MAP1LC3A-202ENST00000374837 TMEM71Q6P5X7 295 aa20.49■□□□□ 0.87
MAP1LC3A-202ENST00000374837 KCNMB4Q86W47 210 aa20.49■□□□□ 0.87
MAP1LC3A-202ENST00000374837 NCSTNQ92542 709 aa20.49■□□□□ 0.87
MAP1LC3A-202ENST00000374837 CFAP36Q96G28 342 aa20.49■□□□□ 0.87
MAP1LC3A-202ENST00000374837 DPYSL5Q9BPU6 564 aa20.49■□□□□ 0.87
MAP1LC3A-202ENST00000374837 TSSK1BQ9BXA7 367 aa20.49■□□□□ 0.87
MAP1LC3A-202ENST00000374837 RAB17Q9H0T7 212 aa20.49■□□□□ 0.87
MAP1LC3A-202ENST00000374837 EPB41L1Q9H4G0 881 aa20.49■□□□□ 0.87
MAP1LC3A-202ENST00000374837 IARS2Q9NSE4 1012 aaKnown RBP20.49■□□□□ 0.87
MAP1LC3A-202ENST00000374837 OGFRQ9NZT2 677 aa20.49■□□□□ 0.87
MAP1LC3A-202ENST00000374837 TMEM9Q9P0T7 183 aa20.49■□□□□ 0.87
MAP1LC3A-202ENST00000374837 ZC3H7BQ9UGR2 993 aaKnown RBP20.49■□□□□ 0.87
MAP1LC3A-202ENST00000374837 CRYL1Q9Y2S2 319 aa20.49■□□□□ 0.87
MAP1LC3A-202ENST00000374837 AKAP13Q12802 2813 aa20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 IGHV5-10-1A0A0J9YXX1 117 aa20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 BHMG1C9JSJ3 638 aaPredicted RBP20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 IFRD1O00458 451 aaPredicted RBP20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 UBXN7O94888 489 aa20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 CAPNS1P04632 268 aa20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 ERVK-10P10266 1014 aa20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 TYRP1P17643 537 aa20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 AMD1P17707 334 aa20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 AOAHP28039 575 aa20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 LIMK2P53671 638 aa20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 CSE1LP55060 971 aaKnown RBP20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 ADARP55265 1226 aaKnown RBP20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 SLC7A5Q01650 507 aa20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 PLOD1Q02809 727 aaPredicted RBP20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 CYP4F3Q08477 520 aa20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 SYTL3Q4VX76 610 aa20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 PHF19Q5T6S3 580 aa20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 UNC5AQ6ZN44 842 aa20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 PDZD3Q86UT5 571 aa20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 ANKMY2Q8IV38 441 aa20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 LMNTD2Q8IXW0 634 aa20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 MMGT1Q8N4V1 131 aa20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 PHC3Q8NDX5 983 aa20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 MNS1Q8NEH6 495 aa20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 OR4D9Q8NGE8 314 aa20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 CALML6Q8TD86 181 aa20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 ZFPM2Q8WW38 1151 aa20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 JPH3Q8WXH2 748 aaPredicted RBP20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 TMEM159Q96B96 161 aa20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 LIN37Q96GY3 246 aaPredicted RBP20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 FERD3LQ96RJ6 166 aa20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 STRADBQ9C0K7 418 aa20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 FBXO6Q9NRD1 293 aaPredicted RBP20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 INTS10Q9NVR2 710 aaKnown RBP20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 VPS9D1Q9Y2B5 631 aa20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 HEBP2Q9Y5Z4 205 aa20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 COLEC10Q9Y6Z7 277 aa20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 BPTFQ12830 3046 aa20.48■□□□□ 0.87
MAP1LC3A-202ENST00000374837 KNTC1P50748 2209 aa20.47■□□□□ 0.87
MAP1LC3A-202ENST00000374837 ZFC3H1O60293 1989 aaKnown RBP20.47■□□□□ 0.87
MAP1LC3A-202ENST00000374837 GPC4O75487 556 aa20.47■□□□□ 0.87
MAP1LC3A-202ENST00000374837 ESR1P03372 595 aa20.47■□□□□ 0.87
MAP1LC3A-202ENST00000374837 MPOP05164 745 aa20.47■□□□□ 0.87
MAP1LC3A-202ENST00000374837 ACADLP28330 430 aa20.47■□□□□ 0.87
MAP1LC3A-202ENST00000374837 SLC1A2P43004 574 aa20.47■□□□□ 0.87
MAP1LC3A-202ENST00000374837 LSSP48449 732 aa20.47■□□□□ 0.87
MAP1LC3A-202ENST00000374837 HSPA14Q0VDF9 509 aa20.47■□□□□ 0.87
MAP1LC3A-202ENST00000374837 KRT33BQ14525 404 aa20.47■□□□□ 0.87
MAP1LC3A-202ENST00000374837 FASTKD3Q14CZ7 662 aaKnown RBP20.47■□□□□ 0.87
MAP1LC3A-202ENST00000374837 STEAP4Q687X5 459 aa20.47■□□□□ 0.87
MAP1LC3A-202ENST00000374837 C8orf74Q6P047 294 aa20.47■□□□□ 0.87
MAP1LC3A-202ENST00000374837 WDR74Q6RFH5 385 aaPredicted RBP20.47■□□□□ 0.87
MAP1LC3A-202ENST00000374837 WDR36Q8NI36 951 aaKnown RBP20.47■□□□□ 0.87
MAP1LC3A-202ENST00000374837 MDM1Q8TC05 714 aa20.47■□□□□ 0.87
MAP1LC3A-202ENST00000374837 TFGQ92734 400 aaPredicted RBP20.47■□□□□ 0.87
MAP1LC3A-202ENST00000374837 ART4Q93070 314 aa20.47■□□□□ 0.87
MAP1LC3A-202ENST00000374837 NXPE2Q96DL1 559 aa20.47■□□□□ 0.87
MAP1LC3A-202ENST00000374837 PANX3Q96QZ0 392 aa20.47■□□□□ 0.87
MAP1LC3A-202ENST00000374837 FAM167BQ9BTA0 163 aa20.47■□□□□ 0.87
MAP1LC3A-202ENST00000374837 POLR1BQ9H9Y6 1135 aa20.47■□□□□ 0.87
MAP1LC3A-202ENST00000374837 PDP2Q9P2J9 529 aa20.47■□□□□ 0.87
MAP1LC3A-202ENST00000374837 SLC24A2Q9UI40 661 aa20.47■□□□□ 0.87
MAP1LC3A-202ENST00000374837 FBXO5Q9UKT4 447 aa20.47■□□□□ 0.87
MAP1LC3A-202ENST00000374837 SATB2Q9UPW6 733 aa20.47■□□□□ 0.87
MAP1LC3A-202ENST00000374837 CDYLQ9Y232 598 aa20.47■□□□□ 0.87
MAP1LC3A-202ENST00000374837 AK5Q9Y6K8 562 aa20.47■□□□□ 0.87
MAP1LC3A-202ENST00000374837 DSPP15924 2871 aaKnown RBP20.47■□□□□ 0.87
MAP1LC3A-202ENST00000374837 COL27A1Q8IZC6 1860 aaPredicted RBP20.46■□□□□ 0.87
MAP1LC3A-202ENST00000374837 CCDC187A0A096LP49 1063 aa20.46■□□□□ 0.87
MAP1LC3A-202ENST00000374837 PMS2P1A4D2B8 440 aa20.46■□□□□ 0.87
MAP1LC3A-202ENST00000374837 CTAGE15A4D2H0 777 aa20.46■□□□□ 0.87
MAP1LC3A-202ENST00000374837 SRRM3A6NNA2 597 aaPredicted RBP20.46■□□□□ 0.87
MAP1LC3A-202ENST00000374837 CTAGE8P0CG41 777 aa20.46■□□□□ 0.87
MAP1LC3A-202ENST00000374837 PKMP14618 531 aaKnown RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms