RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 IFI30P13284 250 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 CPB1P15086 417 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 GGT1P19440 569 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 ERP29P30040 261 aaKnown RBP12.72□□□□□ -0.37
PRPF4-201ENST00000374198 HNF4AP41235 474 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 IL12RB1P42701 662 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 CTSKP43235 329 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 LBX1P52954 281 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 FOXA1P55317 472 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 FAPQ12884 760 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 GBX1Q14549 363 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 MXD4Q14582 209 aaPredicted RBP12.72□□□□□ -0.37
PRPF4-201ENST00000374198 PAFAH1B3Q15102 231 aaKnown RBP12.72□□□□□ -0.37
PRPF4-201ENST00000374198 RAP1GAP2Q684P5 730 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 IL31Q6EBC2 164 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 ZNF767PQ75MW2 155 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 OR8H2Q8N162 312 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 TCAIMQ8N3R3 496 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.72□□□□□ -0.37
PRPF4-201ENST00000374198 ZMIZ2Q8NF64 920 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 RNF139Q8WU17 664 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 GPRASP2Q96D09 838 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 MRPL9Q9BYD2 267 aaKnown RBP12.72□□□□□ -0.37
PRPF4-201ENST00000374198 TUBB1Q9H4B7 451 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 SMPD4Q9NXE4 827 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 MAP3K20Q9NYL2 800 aaKnown RBP12.72□□□□□ -0.37
PRPF4-201ENST00000374198 FZD10Q9ULW2 581 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 VPS4AQ9UN37 437 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 RWDD3Q9Y3V2 267 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 AZIN1O14977 448 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 FAM20BO75063 409 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 CDK14O94921 469 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 ITGB3P05106 788 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 LINC00032P0C843 101 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 PPP3CCP48454 512 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 SMN1Q16637 294 aaKnown RBP12.72□□□□□ -0.37
PRPF4-201ENST00000374198 PKN3Q6P5Z2 889 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 NECAB2Q7Z6G3 386 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 FAM131BQ86XD5 332 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 LIX1LQ8IVB5 337 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 GLB1L3Q8NCI6 653 aaPredicted RBP12.72□□□□□ -0.37
PRPF4-201ENST00000374198 FBXO30Q8TB52 745 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 CLEC4CQ8WTT0 213 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 PMEPA1Q969W9 287 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 TEX13BQ9BXU2 312 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 BEX2Q9BXY8 128 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 PRDM8Q9NQV8 689 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 TEKT2Q9UIF3 430 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 UTS2RQ9UKP6 389 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 RIPK3Q9Y572 518 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 MANSC4A6NHS7 340 aaPredicted RBP12.71□□□□□ -0.37
PRPF4-201ENST00000374198 PPP6CO00743 305 aa12.71□□□□□ -0.37
PRPF4-201ENST00000374198 SCO1O75880 301 aa12.71□□□□□ -0.37
PRPF4-201ENST00000374198 OR7A10O76100 309 aa12.71□□□□□ -0.37
PRPF4-201ENST00000374198 NPPAP01160 153 aa12.71□□□□□ -0.37
PRPF4-201ENST00000374198 SERPINF2P08697 491 aa12.71□□□□□ -0.37
PRPF4-201ENST00000374198 NFKB1P19838 968 aa12.71□□□□□ -0.37
PRPF4-201ENST00000374198 HCAR3P49019 387 aa12.71□□□□□ -0.37
PRPF4-201ENST00000374198 NKX3-2P78367 333 aa12.71□□□□□ -0.37
PRPF4-201ENST00000374198 CD83Q01151 205 aa12.71□□□□□ -0.37
PRPF4-201ENST00000374198 EFR3AQ14156 821 aa12.71□□□□□ -0.37
PRPF4-201ENST00000374198 AAK1Q2M2I8 961 aa12.71□□□□□ -0.37
PRPF4-201ENST00000374198 RBM20Q5T481 1227 aaKnown RBP12.71□□□□□ -0.37
PRPF4-201ENST00000374198 PLCZ1Q86YW0 608 aa12.71□□□□□ -0.37
PRPF4-201ENST00000374198 KBTBD8Q8NFY9 601 aa12.71□□□□□ -0.37
PRPF4-201ENST00000374198 OR4M1Q8NGD0 313 aa12.71□□□□□ -0.37
PRPF4-201ENST00000374198 LRRC20Q8TCA0 184 aa12.71□□□□□ -0.37
PRPF4-201ENST00000374198 PPP1R13LQ8WUF5 828 aa12.71□□□□□ -0.37
PRPF4-201ENST00000374198 DEDD2Q8WXF8 326 aa12.71□□□□□ -0.37
PRPF4-201ENST00000374198 C8orf48Q96LL4 319 aa12.71□□□□□ -0.37
PRPF4-201ENST00000374198 MID1IP1Q9NPA3 183 aa12.71□□□□□ -0.37
PRPF4-201ENST00000374198 UBP1Q9NZI7 540 aa12.71□□□□□ -0.37
PRPF4-201ENST00000374198 CDH9Q9ULB4 789 aa12.71□□□□□ -0.37
PRPF4-201ENST00000374198 TRAPPC4Q9Y296 219 aa12.71□□□□□ -0.37
PRPF4-201ENST00000374198 HSPE1-MOB4S4R3N1 261 aa12.71□□□□□ -0.37
PRPF4-201ENST00000374198 OTOFQ9HC10 1997 aa12.71□□□□□ -0.37
PRPF4-201ENST00000374198 PCNTO95613 3336 aa12.71□□□□□ -0.37
PRPF4-201ENST00000374198 OR6C70A6NIJ9 312 aa12.71□□□□□ -0.38
PRPF4-201ENST00000374198 MITFO75030 526 aaPredicted RBP12.71□□□□□ -0.38
PRPF4-201ENST00000374198 PSKH1P11801 424 aa12.71□□□□□ -0.38
PRPF4-201ENST00000374198 PRKACAP17612 351 aa12.71□□□□□ -0.38
PRPF4-201ENST00000374198 KCNC1P48547 511 aa12.71□□□□□ -0.38
PRPF4-201ENST00000374198 UFM1P61960 85 aa12.71□□□□□ -0.38
PRPF4-201ENST00000374198 HERVK_113P63132 956 aa12.71□□□□□ -0.38
PRPF4-201ENST00000374198 GRIK2Q13002 908 aa12.71□□□□□ -0.38
PRPF4-201ENST00000374198 SIM2Q14190 667 aaPredicted RBP12.71□□□□□ -0.38
PRPF4-201ENST00000374198 PKDCCQ504Y2 493 aa12.71□□□□□ -0.38
PRPF4-201ENST00000374198 ARMC4Q5T2S8 1044 aa12.71□□□□□ -0.38
PRPF4-201ENST00000374198 KANK2Q63ZY3 851 aa12.71□□□□□ -0.38
PRPF4-201ENST00000374198 ARHGAP36Q6ZRI8 547 aa12.71□□□□□ -0.38
PRPF4-201ENST00000374198 AMIGO1Q86WK6 493 aa12.71□□□□□ -0.38
PRPF4-201ENST00000374198 ZDHHC17Q8IUH5 632 aa12.71□□□□□ -0.38
PRPF4-201ENST00000374198 ADHFE1Q8IWW8 467 aa12.71□□□□□ -0.38
PRPF4-201ENST00000374198 C2CD4AQ8NCU7 369 aaPredicted RBP12.71□□□□□ -0.38
PRPF4-201ENST00000374198 SLC47A1Q96FL8 570 aa12.71□□□□□ -0.38
PRPF4-201ENST00000374198 ZSCAN5AQ9BUG6 496 aa12.71□□□□□ -0.38
PRPF4-201ENST00000374198 ERVK-6Q9BXR3 956 aa12.71□□□□□ -0.38
PRPF4-201ENST00000374198 UCK2Q9BZX2 261 aa12.71□□□□□ -0.38
PRPF4-201ENST00000374198 ACTR8Q9H981 624 aa12.71□□□□□ -0.38
PRPF4-201ENST00000374198 ZNF556Q9HAH1 456 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms