RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 CFAP99D6REC4 459 aa17.54■□□□□ 0.4
CTSA-204ENST00000372484 HOXC11O43248 304 aaPredicted RBP17.54■□□□□ 0.4
CTSA-204ENST00000372484 PLXNA2O75051 1894 aa17.54■□□□□ 0.4
CTSA-204ENST00000372484 TULP3O75386 442 aa17.54■□□□□ 0.4
CTSA-204ENST00000372484 UFM1P61960 85 aa17.54■□□□□ 0.4
CTSA-204ENST00000372484 RCAN2Q14206 197 aa17.54■□□□□ 0.4
CTSA-204ENST00000372484 ABRAXAS2Q15018 415 aa17.54■□□□□ 0.4
CTSA-204ENST00000372484 NR6A1Q15406 480 aa17.54■□□□□ 0.4
CTSA-204ENST00000372484 FAM109BQ6ICB4 259 aaPredicted RBP17.54■□□□□ 0.4
CTSA-204ENST00000372484 ANO7Q6IWH7 933 aa17.54■□□□□ 0.4
CTSA-204ENST00000372484 METTL2BQ6P1Q9 378 aaKnown RBP17.54■□□□□ 0.4
CTSA-204ENST00000372484 CHCHD4Q8N4Q1 142 aa17.54■□□□□ 0.4
CTSA-204ENST00000372484 WFIKKN2Q8TEU8 576 aa17.54■□□□□ 0.4
CTSA-204ENST00000372484 TSPEARQ8WU66 669 aa17.54■□□□□ 0.4
CTSA-204ENST00000372484 GPATCH1Q9BRR8 931 aaKnown RBP17.54■□□□□ 0.4
CTSA-204ENST00000372484 GID8Q9NWU2 228 aa17.54■□□□□ 0.4
CTSA-204ENST00000372484 A0A1W2PP18 115 aa17.54■□□□□ 0.4
CTSA-204ENST00000372484 C16orf96A6NNT2 1141 aa17.54■□□□□ 0.4
CTSA-204ENST00000372484 CASQ2O14958 399 aaPredicted RBP17.54■□□□□ 0.4
CTSA-204ENST00000372484 STK16O75716 305 aa17.54■□□□□ 0.4
CTSA-204ENST00000372484 EPB42P16452 691 aa17.54■□□□□ 0.4
CTSA-204ENST00000372484 TRAP1Q12931 704 aaKnown RBP17.54■□□□□ 0.4
CTSA-204ENST00000372484 PDCD4Q53EL6 469 aaKnown RBP17.54■□□□□ 0.4
CTSA-204ENST00000372484 COQ5Q5HYK3 327 aa17.54■□□□□ 0.4
CTSA-204ENST00000372484 UBE2R2Q712K3 238 aaPredicted RBP17.54■□□□□ 0.4
CTSA-204ENST00000372484 VPS33AQ96AX1 596 aa17.54■□□□□ 0.4
CTSA-204ENST00000372484 RIOK2Q9BVS4 552 aaKnown RBP17.54■□□□□ 0.4
CTSA-204ENST00000372484 SLC52A3Q9NQ40 469 aa17.54■□□□□ 0.4
CTSA-204ENST00000372484 DKK3Q9UBP4 350 aa17.54■□□□□ 0.4
CTSA-204ENST00000372484 SUN2Q9UH99 717 aa17.54■□□□□ 0.4
CTSA-204ENST00000372484 PDE10AQ9Y233 779 aa17.54■□□□□ 0.4
CTSA-204ENST00000372484 EIF4E1BA6NMX2 242 aaKnown RBP17.53■□□□□ 0.4
CTSA-204ENST00000372484 LSM1O15116 133 aaKnown RBP17.53■□□□□ 0.4
CTSA-204ENST00000372484 MSH3P20585 1137 aa17.53■□□□□ 0.4
CTSA-204ENST00000372484 VASPP50552 380 aaPredicted RBP17.53■□□□□ 0.4
CTSA-204ENST00000372484 KLC1Q07866 573 aa17.53■□□□□ 0.4
CTSA-204ENST00000372484 PRMT9Q6P2P2 845 aa17.53■□□□□ 0.4
CTSA-204ENST00000372484 SERPINA13PQ6UXR4 307 aa17.53■□□□□ 0.4
CTSA-204ENST00000372484 MINDY1Q8N5J2 469 aa17.53■□□□□ 0.4
CTSA-204ENST00000372484 ZFYVE19Q96K21 471 aa17.53■□□□□ 0.4
CTSA-204ENST00000372484 ZSCAN5AQ9BUG6 496 aa17.53■□□□□ 0.4
CTSA-204ENST00000372484 TRIM54Q9BYV2 358 aa17.53■□□□□ 0.4
CTSA-204ENST00000372484 EBF3Q9H4W6 596 aa17.53■□□□□ 0.4
CTSA-204ENST00000372484 PARVBQ9HBI1 364 aa17.53■□□□□ 0.4
CTSA-204ENST00000372484 RAD18Q9NS91 495 aa17.53■□□□□ 0.4
CTSA-204ENST00000372484 SLC27A6Q9Y2P4 619 aa17.53■□□□□ 0.4
CTSA-204ENST00000372484 RANBP2P49792 3224 aaKnown RBP17.53■□□□□ 0.4
CTSA-204ENST00000372484 FFAR3O14843 346 aa17.53■□□□□ 0.4
CTSA-204ENST00000372484 GPR42O15529 346 aa17.53■□□□□ 0.4
CTSA-204ENST00000372484 NUAK1O60285 661 aa17.53■□□□□ 0.4
CTSA-204ENST00000372484 C8GP07360 202 aa17.53■□□□□ 0.4
CTSA-204ENST00000372484 POLR2JP52435 117 aaKnown RBP17.53■□□□□ 0.4
CTSA-204ENST00000372484 GBX1Q14549 363 aa17.53■□□□□ 0.4
CTSA-204ENST00000372484 CDKL4Q5MAI5 379 aa17.53■□□□□ 0.4
CTSA-204ENST00000372484 PLEKHS1Q5SXH7 462 aa17.53■□□□□ 0.4
CTSA-204ENST00000372484 HENMT1Q5T8I9 393 aaKnown RBP17.53■□□□□ 0.4
CTSA-204ENST00000372484 DPPA4Q7L190 304 aa17.53■□□□□ 0.4
CTSA-204ENST00000372484 PDSS2Q86YH6 399 aa17.53■□□□□ 0.4
CTSA-204ENST00000372484 VRK3Q8IV63 474 aa17.53■□□□□ 0.4
CTSA-204ENST00000372484 TRAM1L1Q8N609 369 aa17.53■□□□□ 0.4
CTSA-204ENST00000372484 LRRC58Q96CX6 371 aa17.53■□□□□ 0.4
CTSA-204ENST00000372484 LRGUKQ96M69 825 aa17.53■□□□□ 0.4
CTSA-204ENST00000372484 SLC12A9Q9BXP2 914 aa17.53■□□□□ 0.4
CTSA-204ENST00000372484 ZIM2Q9NZV7 527 aa17.53■□□□□ 0.4
CTSA-204ENST00000372484 C2orf16Q68DN1 1984 aa17.52■□□□□ 0.4
CTSA-204ENST00000372484 PABPN1LA6NDY0 278 aaKnown RBP17.52■□□□□ 0.4
CTSA-204ENST00000372484 CCDC154A6NI56 674 aa17.52■□□□□ 0.4
CTSA-204ENST00000372484 FXYD1O00168 92 aa17.52■□□□□ 0.4
CTSA-204ENST00000372484 KPNA3O00505 521 aaPredicted RBP17.52■□□□□ 0.4
CTSA-204ENST00000372484 KPNA5O15131 536 aa17.52■□□□□ 0.4
CTSA-204ENST00000372484 ENO2P09104 434 aaPredicted RBP17.52■□□□□ 0.4
CTSA-204ENST00000372484 HIST1H2AGP0C0S8 130 aaPredicted RBP17.52■□□□□ 0.4
CTSA-204ENST00000372484 ELFN1P0C7U0 828 aa17.52■□□□□ 0.4
CTSA-204ENST00000372484 HIST1H2ADP20671 130 aa17.52■□□□□ 0.4
CTSA-204ENST00000372484 ZFP36L2P47974 494 aaKnown RBP17.52■□□□□ 0.4
CTSA-204ENST00000372484 PIK3CGP48736 1102 aa17.52■□□□□ 0.4
CTSA-204ENST00000372484 EMX2Q04743 252 aa17.52■□□□□ 0.4
CTSA-204ENST00000372484 MESP2Q0VG99 397 aa17.52■□□□□ 0.4
CTSA-204ENST00000372484 BLMHQ13867 455 aa17.52■□□□□ 0.4
CTSA-204ENST00000372484 CAPRIN1Q14444 709 aaKnown RBP17.52■□□□□ 0.4
CTSA-204ENST00000372484 AP5B1Q2VPB7 878 aa17.52■□□□□ 0.4
CTSA-204ENST00000372484 ZNF284Q2VY69 593 aa17.52■□□□□ 0.4
CTSA-204ENST00000372484 GRAMD1BQ3KR37 738 aa17.52■□□□□ 0.4
CTSA-204ENST00000372484 FAM78AQ5JUQ0 283 aa17.52■□□□□ 0.4
CTSA-204ENST00000372484 HABP4Q5JVS0 413 aaKnown RBP17.52■□□□□ 0.4
CTSA-204ENST00000372484 IRGCQ6NXR0 463 aa17.52■□□□□ 0.4
CTSA-204ENST00000372484 ERAP2Q6P179 960 aa17.52■□□□□ 0.4
CTSA-204ENST00000372484 BPIFB1Q8TDL5 484 aa17.52■□□□□ 0.4
CTSA-204ENST00000372484 HCAR2Q8TDS4 363 aa17.52■□□□□ 0.4
CTSA-204ENST00000372484 ASB11Q8WXH4 323 aa17.52■□□□□ 0.4
CTSA-204ENST00000372484 HIST1H2AHQ96KK5 128 aa17.52■□□□□ 0.4
CTSA-204ENST00000372484 HIST1H2AJQ99878 128 aa17.52■□□□□ 0.4
CTSA-204ENST00000372484 H2AFJQ9BTM1 129 aa17.52■□□□□ 0.4
CTSA-204ENST00000372484 NTMT1Q9BV86 223 aa17.52■□□□□ 0.4
CTSA-204ENST00000372484 COPS7BQ9H9Q2 264 aaPredicted RBP17.52■□□□□ 0.4
CTSA-204ENST00000372484 CERS4Q9HA82 394 aa17.52■□□□□ 0.4
CTSA-204ENST00000372484 HEBP1Q9NRV9 189 aa17.52■□□□□ 0.4
CTSA-204ENST00000372484 ABCD2Q9UBJ2 740 aa17.52■□□□□ 0.4
CTSA-204ENST00000372484 KLQ9UEF7 1012 aa17.52■□□□□ 0.4
CTSA-204ENST00000372484 RNF11Q9Y3C5 154 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms