RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 DKK3Q9UBP4 350 aa16.64■□□□□ 0.25
DKC1-201ENST00000369550 TMEFF2Q9UIK5 374 aaPredicted RBP16.64■□□□□ 0.25
DKC1-201ENST00000369550 FAM50BQ9Y247 325 aa16.64■□□□□ 0.25
DKC1-201ENST00000369550 A0A0G2JLL6 359 aaPredicted RBP16.64■□□□□ 0.25
DKC1-201ENST00000369550 PDZK1P1A8MUH7 402 aa16.64■□□□□ 0.25
DKC1-201ENST00000369550 CENPBD1B2RD01 187 aa16.64■□□□□ 0.25
DKC1-201ENST00000369550 ENPP3O14638 875 aa16.64■□□□□ 0.25
DKC1-201ENST00000369550 FAM20BO75063 409 aa16.64■□□□□ 0.25
DKC1-201ENST00000369550 ECI2O75521 394 aa16.64■□□□□ 0.25
DKC1-201ENST00000369550 G6PDP11413 515 aa16.64■□□□□ 0.25
DKC1-201ENST00000369550 POLR2EP19388 210 aaKnown RBP16.64■□□□□ 0.25
DKC1-201ENST00000369550 S100A5P33763 92 aa16.64■□□□□ 0.25
DKC1-201ENST00000369550 SMUG1Q53HV7 270 aa16.64■□□□□ 0.25
DKC1-201ENST00000369550 FKBP9P1Q75LS8 142 aa16.64■□□□□ 0.25
DKC1-201ENST00000369550 PRRT2Q7Z6L0 340 aaPredicted RBP16.64■□□□□ 0.25
DKC1-201ENST00000369550 HIPK1Q86Z02 1210 aa16.64■□□□□ 0.25
DKC1-201ENST00000369550 OR7G1Q8NGA0 311 aa16.64■□□□□ 0.25
DKC1-201ENST00000369550 OR8J3Q8NGG0 315 aa16.64■□□□□ 0.25
DKC1-201ENST00000369550 CDK5RAP1Q96SZ6 601 aaKnown RBP16.64■□□□□ 0.25
DKC1-201ENST00000369550 ARNT2Q9HBZ2 717 aa16.64■□□□□ 0.25
DKC1-201ENST00000369550 FNDC1Q4ZHG4 1894 aaPredicted RBP16.63■□□□□ 0.25
DKC1-201ENST00000369550 PLXNA1Q9UIW2 1896 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 UBA6A0AVT1 1052 aaPredicted RBP16.63■□□□□ 0.25
DKC1-201ENST00000369550 GRXCR2A6NFK2 248 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 ASB14A6NK59 587 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 CXCR6O00574 342 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 CD3EAPO15446 510 aaKnown RBP16.63■□□□□ 0.25
DKC1-201ENST00000369550 MLYCDO95822 493 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 DBTP11182 482 aaKnown RBP16.63■□□□□ 0.25
DKC1-201ENST00000369550 TIAL1Q01085 375 aaKnown RBP eCLIP16.63■□□□□ 0.25
DKC1-201ENST00000369550 LAPTM4AQ15012 233 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 SMN1Q16637 294 aaKnown RBP16.63■□□□□ 0.25
DKC1-201ENST00000369550 SYT16Q17RD7 645 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 AAK1Q2M2I8 961 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 MRNIPQ6NTE8 343 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 METTL4Q8N3J2 472 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 TOP6BLQ8N6T0 577 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 KIAA1191Q96A73 305 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 REXO4Q9GZR2 422 aaKnown RBP16.63■□□□□ 0.25
DKC1-201ENST00000369550 SLC25A51Q9H1U9 297 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 GALPQ9UBC7 116 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 ZNF225Q9UK10 706 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 ELOVL7A1L3X0 281 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 GABRDO14764 452 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 PGLSO95336 258 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 APOA1P02647 267 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 LCKP06239 509 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 RPS17P08708 135 aaKnown RBP16.63■□□□□ 0.25
DKC1-201ENST00000369550 JUNDP17535 347 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 MSH3P20585 1137 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 TUBA1BP68363 451 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 MVKQ03426 396 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 TPRG1LQ5T0D9 272 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 CES5AQ6NT32 575 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 TUBA1AQ71U36 451 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 GATAD2AQ86YP4 633 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 CELF2-AS1Q8N7Q2 184 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 ZNF548Q8NEK5 533 aaPredicted RBP16.63■□□□□ 0.25
DKC1-201ENST00000369550 FBLIM1Q8WUP2 373 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 CDK15Q96Q40 435 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 CRTAC1Q9NQ79 661 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 TMEM30AQ9NV96 361 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 CDH9Q9ULB4 789 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 GMPPBQ9Y5P6 360 aa16.63■□□□□ 0.25
DKC1-201ENST00000369550 MROH6A6NGR9 719 aa16.62■□□□□ 0.25
DKC1-201ENST00000369550 HOXC11O43248 304 aaPredicted RBP16.62■□□□□ 0.25
DKC1-201ENST00000369550 AIREO43918 545 aa16.62■□□□□ 0.25
DKC1-201ENST00000369550 RHOBTB1O94844 696 aa16.62■□□□□ 0.25
DKC1-201ENST00000369550 OR4F21O95013 312 aa16.62■□□□□ 0.25
DKC1-201ENST00000369550 BMP1P13497 986 aa16.62■□□□□ 0.25
DKC1-201ENST00000369550 HOXD11P31277 338 aaPredicted RBP16.62■□□□□ 0.25
DKC1-201ENST00000369550 DEFA1P59665 94 aa16.62■□□□□ 0.25
DKC1-201ENST00000369550 DEFA3P59666 94 aa16.62■□□□□ 0.25
DKC1-201ENST00000369550 KRR1Q13601 381 aaKnown RBP16.62■□□□□ 0.25
DKC1-201ENST00000369550 PTPRCAPQ14761 206 aa16.62■□□□□ 0.25
DKC1-201ENST00000369550 PAQR3Q6TCH7 311 aa16.62■□□□□ 0.25
DKC1-201ENST00000369550 CYP20A1Q6UW02 462 aa16.62■□□□□ 0.25
DKC1-201ENST00000369550 GPRIN3Q6ZVF9 776 aa16.62■□□□□ 0.25
DKC1-201ENST00000369550 SPATC1Q76KD6 591 aa16.62■□□□□ 0.25
DKC1-201ENST00000369550 ASCC1Q8N9N2 400 aaKnown RBP16.62■□□□□ 0.25
DKC1-201ENST00000369550 OR10Q1Q8NGQ4 319 aa16.62■□□□□ 0.25
DKC1-201ENST00000369550 ELP3Q9H9T3 547 aa16.62■□□□□ 0.25
DKC1-201ENST00000369550 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.62■□□□□ 0.25
DKC1-201ENST00000369550 NEU3Q9UQ49 428 aa16.62■□□□□ 0.25
DKC1-201ENST00000369550 CAB39Q9Y376 341 aaPredicted RBP16.62■□□□□ 0.25
DKC1-201ENST00000369550 N6AMT1Q9Y5N5 214 aa16.62■□□□□ 0.25
DKC1-201ENST00000369550 PABPN1LA6NDY0 278 aaKnown RBP16.62■□□□□ 0.25
DKC1-201ENST00000369550 CLDN24A6NM45 220 aa16.62■□□□□ 0.25
DKC1-201ENST00000369550 CDC7O00311 574 aa16.62■□□□□ 0.25
DKC1-201ENST00000369550 FGF10O15520 208 aaPredicted RBP16.62■□□□□ 0.25
DKC1-201ENST00000369550 ITGAMP11215 1152 aa16.62■□□□□ 0.25
DKC1-201ENST00000369550 CHRNB1P11230 501 aa16.62■□□□□ 0.25
DKC1-201ENST00000369550 HOXB8P17481 243 aaPredicted RBP16.62■□□□□ 0.25
DKC1-201ENST00000369550 ITGB6P18564 788 aa16.62■□□□□ 0.25
DKC1-201ENST00000369550 CYP4F3Q08477 520 aa16.62■□□□□ 0.25
DKC1-201ENST00000369550 ZC3H12BQ5HYM0 836 aaKnown RBP16.62■□□□□ 0.25
DKC1-201ENST00000369550 AGAP6Q5VW22 663 aa16.62■□□□□ 0.25
DKC1-201ENST00000369550 AHSA2Q719I0 299 aa16.62■□□□□ 0.25
DKC1-201ENST00000369550 PARP16Q8N5Y8 322 aa16.62■□□□□ 0.25
DKC1-201ENST00000369550 ZMIZ2Q8NF64 920 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms