RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 TANC1Q9C0D5 1861 aa17.78■□□□□ 0.44
UBQLN4-201ENST00000368309 PRRC2BQ5JSZ5 2229 aaKnown RBP17.78■□□□□ 0.44
UBQLN4-201ENST00000368309 UMPSP11172 480 aa17.78■□□□□ 0.44
UBQLN4-201ENST00000368309 SNX20Q7Z614 316 aa17.78■□□□□ 0.44
UBQLN4-201ENST00000368309 PROSER1Q86XN7 944 aa17.78■□□□□ 0.44
UBQLN4-201ENST00000368309 PAPD5Q8NDF8 572 aaKnown RBP17.78■□□□□ 0.44
UBQLN4-201ENST00000368309 CLHC1Q8NHS4 586 aa17.78■□□□□ 0.44
UBQLN4-201ENST00000368309 GNPTGQ9UJJ9 305 aa17.78■□□□□ 0.44
UBQLN4-201ENST00000368309 KANSL1LA0AUZ9 987 aa17.77■□□□□ 0.44
UBQLN4-201ENST00000368309 TRBC1P01850 177 aa17.77■□□□□ 0.44
UBQLN4-201ENST00000368309 ITGALP20701 1170 aa17.77■□□□□ 0.44
UBQLN4-201ENST00000368309 TUBA4AP68366 448 aa17.77■□□□□ 0.44
UBQLN4-201ENST00000368309 PDPRQ8NCN5 879 aa17.77■□□□□ 0.44
UBQLN4-201ENST00000368309 FIG4Q92562 907 aa17.77■□□□□ 0.44
UBQLN4-201ENST00000368309 CEP295NLQ96MC4 621 aa17.77■□□□□ 0.44
UBQLN4-201ENST00000368309 THUMPD3Q9BV44 507 aaKnown RBP17.77■□□□□ 0.44
UBQLN4-201ENST00000368309 OPTCQ9UBM4 332 aa17.77■□□□□ 0.44
UBQLN4-201ENST00000368309 CCL27Q9Y4X3 112 aa17.77■□□□□ 0.44
UBQLN4-201ENST00000368309 CASP8AP2Q9UKL3 1982 aa17.77■□□□□ 0.44
UBQLN4-201ENST00000368309 A0A087WXM4 84 aa17.77■□□□□ 0.43
UBQLN4-201ENST00000368309 GREM1O60565 184 aa17.77■□□□□ 0.43
UBQLN4-201ENST00000368309 EFEMP2O95967 443 aa17.77■□□□□ 0.43
UBQLN4-201ENST00000368309 VARSP26640 1264 aaKnown RBP17.77■□□□□ 0.43
UBQLN4-201ENST00000368309 FAM174BQ3ZCQ3 159 aa17.77■□□□□ 0.43
UBQLN4-201ENST00000368309 TMEM259Q4ZIN3 620 aa17.77■□□□□ 0.43
UBQLN4-201ENST00000368309 ZNF783Q6ZMS7 281 aa17.77■□□□□ 0.43
UBQLN4-201ENST00000368309 KRTCAP2Q8N6L1 136 aa17.77■□□□□ 0.43
UBQLN4-201ENST00000368309 STOML2Q9UJZ1 356 aa17.77■□□□□ 0.43
UBQLN4-201ENST00000368309 GLYATL1P3A0A0U1RQE8 302 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 LOC730098B7Z3J9 87 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 DGKAP23743 735 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 CDK9P50750 372 aaKnown RBP17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 AP1S1P61966 158 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 ARHGEF7Q14155 803 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 ZSWIM9Q86XI8 627 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 CLVS1Q8IUQ0 354 aaPredicted RBP17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 FAM86B1Q8N7N1 296 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 OR10A6Q8NH74 314 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 ITFG1Q8TB96 612 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 TBCDQ9BTW9 1192 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 HSFX1Q9UBD0 423 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 PCDHB3Q9Y5E6 796 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 BMP10O95393 424 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 ZBTB2Q8N680 514 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 DCAF4L2Q8NA75 395 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 ZNF583Q96ND8 569 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 BDH2Q9BUT1 245 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 CD244Q9BZW8 370 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 NTN4Q9HB63 628 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 DNMT3BQ9UBC3 853 aaKnown RBP17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 ZNF490Q9ULM2 529 aaPredicted RBP17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 OARD1Q9Y530 152 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 ULK1O75385 1050 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 SEC22BO75396 215 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 GLUD1P00367 558 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 NPPAP01160 153 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 ACRV1P26436 265 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 CAPGP40121 348 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 BIRC2Q13490 618 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 PWP1Q13610 501 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 KCTD21Q4G0X4 260 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 RETSATQ6NUM9 610 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 GPR141Q7Z602 305 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 RHBDF1Q96CC6 855 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 C2orf49Q9BVC5 232 aaPredicted RBP17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 IKZF5Q9H5V7 419 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 EBF1Q9UH73 591 aa17.76■□□□□ 0.43
UBQLN4-201ENST00000368309 ARNTLO00327 626 aa17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 CDK4P11802 303 aa17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 GPRC6AQ5T6X5 926 aa17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 LIX1Q8N485 282 aa17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 FBXO30Q8TB52 745 aa17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 PXYLP1Q8TE99 480 aa17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 PPP3R2Q96LZ3 170 aa17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 PCDH10Q9P2E7 1040 aa17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 IST1P53990 364 aa17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 KIAA0040Q15053 153 aa17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 SPANXN4Q5MJ08 99 aa17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 RFLNAQ6ZTI6 216 aa17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 RNF168Q8IYW5 571 aaPredicted RBP17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 OSCP1Q8WVF1 389 aa17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 SLC13A3Q8WWT9 602 aa17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 TRMT2BQ96GJ1 504 aaKnown RBP17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 SEZ6LQ9BYH1 1024 aa17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 MAGEL2Q9UJ55 1249 aa17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 NEUROG3Q9Y4Z2 214 aa17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 PITPNM1O00562 1244 aa17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 KCNH1O95259 989 aa17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 ESRRGP62508 458 aa17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 CYP4F8P98187 520 aa17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 CPSF6Q16630 551 aaKnown RBP eCLIP17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 IMPG1Q17R60 797 aa17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 SLC44A4Q53GD3 710 aa17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 DGKKQ5KSL6 1271 aa17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 ABRAXAS1Q6UWZ7 409 aa17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 RIMKLAQ8IXN7 391 aa17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 RGL4Q8IZJ4 473 aa17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 TNIP2Q8NFZ5 429 aa17.75■□□□□ 0.43
UBQLN4-201ENST00000368309 BPIFB1Q8TDL5 484 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms