RNA–Protein interactions for RNA: ENST00000367503.7

SHPRH-202, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5 BASIC

Gene SHPRH, Length 5,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-202ENST00000367503 FBXO27Q8NI29 283 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 TRPM4Q8TD43 1214 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 GBA3Q9H227 469 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 ARHGEF4Q9NR80 690 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 STOX2Q9P2F5 926 aaPredicted RBP12.1□□□□□ -0.47
SHPRH-202ENST00000367503 TBC1D24Q9ULP9 559 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 MRPL42Q9Y6G3 142 aaKnown RBP12.1□□□□□ -0.47
SHPRH-202ENST00000367503 FAM234BA2RU67 622 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 RPN2P04844 631 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 ZNF767PQ75MW2 155 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 HID1Q8IV36 788 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 TFAP2BQ92481 460 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 RDH12Q96NR8 316 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 BBS4Q96RK4 519 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 ABCG8Q9H221 673 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 APOBEC3GQ9HC16 384 aaKnown RBP12.1□□□□□ -0.47
SHPRH-202ENST00000367503 NECTIN3Q9NQS3 549 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 UBQLN2Q9UHD9 624 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 CPA4Q9UI42 421 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 OAS3Q9Y6K5 1087 aaKnown RBP12.1□□□□□ -0.47
SHPRH-202ENST00000367503 C3P01024 1663 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 FAM25EA8MYX2 175 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 CSF2P04141 144 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 PEPDP12955 493 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 PRKCHP24723 683 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 ERP29P30040 261 aaKnown RBP12.1□□□□□ -0.47
SHPRH-202ENST00000367503 RFX3P48380 749 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 ANKDD1AQ495B1 522 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 TRIM40Q6P9F5 258 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 Q6ZNX1 250 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 KIF18BQ86Y91 864 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 OR52J3Q8NH60 311 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 BIRC7Q96CA5 298 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 ADAM2Q99965 735 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 NLNQ9BYT8 704 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 ANKRD60Q9BZ19 345 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 POLR2J2Q9GZM3 115 aaKnown RBP12.1□□□□□ -0.47
SHPRH-202ENST00000367503 CCM2LQ9NUG4 571 aaPredicted RBP12.1□□□□□ -0.47
SHPRH-202ENST00000367503 IL1BP01584 269 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 MAXP61244 160 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 TCEAL1Q15170 157 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 C6orf141Q5SZD1 244 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 ZNF557Q8N988 423 aaPredicted RBP12.1□□□□□ -0.47
SHPRH-202ENST00000367503 ARRDC4Q8NCT1 418 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 TNFAIP8L1Q8WVP5 186 aa12.1□□□□□ -0.47
SHPRH-202ENST00000367503 TMEM233B4DJY2 109 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 OR5F1O95221 314 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 ITGB1P05556 798 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 DARSP14868 501 aaKnown RBP12.09□□□□□ -0.47
SHPRH-202ENST00000367503 SPATS1Q496A3 300 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 MON1AQ86VX9 555 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 PHACTR4Q8IZ21 702 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 OR52L1Q8NGH7 329 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 LINGO1Q96FE5 620 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 FNDC11Q9BVV2 318 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 C1QTNF1Q9BXJ1 281 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 SOX17Q9H6I2 414 aaPredicted RBP12.09□□□□□ -0.47
SHPRH-202ENST00000367503 GBA2Q9HCG7 927 aaPredicted RBP12.09□□□□□ -0.47
SHPRH-202ENST00000367503 RAD18Q9NS91 495 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 C14orf119Q9NWQ9 140 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 ZNHIT2Q9UHR6 403 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 CLDN5O00501 218 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 SOCS2O14508 198 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 TFAP2AP05549 437 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 TMIEQ8NEW7 156 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 NPLQ9BXD5 320 aaPredicted RBP12.09□□□□□ -0.47
SHPRH-202ENST00000367503 LRTM1Q9HBL6 345 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 MTRF1O75570 445 aaKnown RBP12.09□□□□□ -0.47
SHPRH-202ENST00000367503 RFPL1O75677 317 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 GJB1P08034 283 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 PCSK2P16519 638 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 GSTM2P28161 218 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 ATP6AP1Q15904 470 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 CPSF6Q16630 551 aaKnown RBP eCLIP12.09□□□□□ -0.47
SHPRH-202ENST00000367503 ANXA8L1Q5VT79 327 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 CXorf57Q6NSI4 855 aaKnown RBP12.09□□□□□ -0.47
SHPRH-202ENST00000367503 SYVN1Q86TM6 617 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 RNASE11Q8TAA1 199 aaKnown RBP12.09□□□□□ -0.47
SHPRH-202ENST00000367503 LGALS12Q96DT0 336 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 TIGARQ9NQ88 270 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 DNMT3LQ9UJW3 386 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 ST3GAL5Q9UNP4 418 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 CMAHPQ9Y471 501 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 CPQQ9Y646 472 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 COL1A2P08123 1366 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 NPEPPSL1A6NEC2 478 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 H3BM21 787 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 QSOX1O00391 747 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 DLGAP1O14490 977 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 GRIN3BO60391 1043 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 XYLBO75191 536 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 CHRNB1P11230 501 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 PROZP22891 400 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 NMBRP28336 390 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 OMPP47874 163 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 CDH4P55283 916 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 CSTF1Q05048 431 aaKnown RBP12.09□□□□□ -0.47
SHPRH-202ENST00000367503 VGLL4Q14135 290 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 SMCO1Q147U7 214 aa12.09□□□□□ -0.47
SHPRH-202ENST00000367503 TSTQ16762 297 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms