RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 ELOVL7A1L3X0 281 aa4.08□□□□□ -1.76
RNU4-28P-201ENST00000364739 ANTXRLA6NF34 631 aa4.08□□□□□ -1.76
RNU4-28P-201ENST00000364739 ZNF197O14709 1029 aa4.08□□□□□ -1.76
RNU4-28P-201ENST00000364739 TRMUO75648 421 aaKnown RBP4.08□□□□□ -1.76
RNU4-28P-201ENST00000364739 GJB3O75712 270 aa4.08□□□□□ -1.76
RNU4-28P-201ENST00000364739 CSPG5O95196 566 aa4.08□□□□□ -1.76
RNU4-28P-201ENST00000364739 NADKO95544 446 aaPredicted RBP4.08□□□□□ -1.76
RNU4-28P-201ENST00000364739 IGLV1-44P01699 117 aa4.08□□□□□ -1.76
RNU4-28P-201ENST00000364739 KRTAP10-12P60413 245 aa4.08□□□□□ -1.76
RNU4-28P-201ENST00000364739 MELKQ14680 651 aa4.08□□□□□ -1.76
RNU4-28P-201ENST00000364739 CYP4A22Q5TCH4 519 aa4.08□□□□□ -1.76
RNU4-28P-201ENST00000364739 ZC2HC1BQ5TFG8 222 aa4.08□□□□□ -1.76
RNU4-28P-201ENST00000364739 INTS8Q75QN2 995 aaKnown RBP4.08□□□□□ -1.76
RNU4-28P-201ENST00000364739 GALNT5Q7Z7M9 940 aa4.08□□□□□ -1.76
RNU4-28P-201ENST00000364739 ISCA2Q86U28 154 aa4.08□□□□□ -1.76
RNU4-28P-201ENST00000364739 DDHD1Q8NEL9 900 aa4.08□□□□□ -1.76
RNU4-28P-201ENST00000364739 LRRC59Q96AG4 307 aaKnown RBP4.08□□□□□ -1.76
RNU4-28P-201ENST00000364739 ART5Q96L15 291 aa4.08□□□□□ -1.76
RNU4-28P-201ENST00000364739 RTP3Q9BQQ7 232 aa4.08□□□□□ -1.76
RNU4-28P-201ENST00000364739 KRTAP4-4Q9BYR3 166 aa4.08□□□□□ -1.76
RNU4-28P-201ENST00000364739 ZHX3Q9H4I2 956 aa4.08□□□□□ -1.76
RNU4-28P-201ENST00000364739 ACKR4Q9NPB9 350 aa4.08□□□□□ -1.76
RNU4-28P-201ENST00000364739 COQ3Q9NZJ6 369 aa4.08□□□□□ -1.76
RNU4-28P-201ENST00000364739 AMACRQ9UHK6 382 aa4.08□□□□□ -1.76
RNU4-28P-201ENST00000364739 HACL1Q9UJ83 578 aa4.08□□□□□ -1.76
RNU4-28P-201ENST00000364739 SLC7A7Q9UM01 511 aa4.08□□□□□ -1.76
RNU4-28P-201ENST00000364739 EXO1Q9UQ84 846 aaKnown RBP4.08□□□□□ -1.76
RNU4-28P-201ENST00000364739 RIPK3Q9Y572 518 aa4.08□□□□□ -1.76
RNU4-28P-201ENST00000364739 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.08□□□□□ -1.76
RNU4-28P-201ENST00000364739 MYH15Q9Y2K3 1946 aa4.07□□□□□ -1.76
RNU4-28P-201ENST00000364739 SOS1Q07889 1333 aaPredicted RBP4.07□□□□□ -1.76
RNU4-28P-201ENST00000364739 A0A1W2PQ09 198 aa4.07□□□□□ -1.76
RNU4-28P-201ENST00000364739 LRRC72A6NJI9 287 aa4.07□□□□□ -1.76
RNU4-28P-201ENST00000364739 CDRT15L2A8MXV6 281 aa4.07□□□□□ -1.76
RNU4-28P-201ENST00000364739 ZBED4O75132 1171 aa4.07□□□□□ -1.76
RNU4-28P-201ENST00000364739 GABRA5P31644 462 aa4.07□□□□□ -1.76
RNU4-28P-201ENST00000364739 RXRGP48443 463 aa4.07□□□□□ -1.76
RNU4-28P-201ENST00000364739 LGALS3BPQ08380 585 aa4.07□□□□□ -1.76
RNU4-28P-201ENST00000364739 DMPKQ09013 629 aa4.07□□□□□ -1.76
RNU4-28P-201ENST00000364739 PNRC1Q12796 327 aaPredicted RBP4.07□□□□□ -1.76
RNU4-28P-201ENST00000364739 ZFP69Q49AA0 526 aa4.07□□□□□ -1.76
RNU4-28P-201ENST00000364739 GTDC1Q4AE62 458 aa4.07□□□□□ -1.76
RNU4-28P-201ENST00000364739 RAB41Q5JT25 222 aa4.07□□□□□ -1.76
RNU4-28P-201ENST00000364739 ARHGEF16Q5VV41 709 aa4.07□□□□□ -1.76
RNU4-28P-201ENST00000364739 ZNF772Q68DY9 489 aaPredicted RBP4.07□□□□□ -1.76
RNU4-28P-201ENST00000364739 FAM109BQ6ICB4 259 aaPredicted RBP4.07□□□□□ -1.76
RNU4-28P-201ENST00000364739 BHLHB9Q6PI77 547 aa4.07□□□□□ -1.76
RNU4-28P-201ENST00000364739 OR6C1Q96RD1 312 aa4.07□□□□□ -1.76
RNU4-28P-201ENST00000364739 MYADMQ96S97 322 aa4.07□□□□□ -1.76
RNU4-28P-201ENST00000364739 PAFAH2Q99487 392 aa4.07□□□□□ -1.76
RNU4-28P-201ENST00000364739 A4GALTQ9NPC4 353 aa4.07□□□□□ -1.76
RNU4-28P-201ENST00000364739 ZNF71Q9NQZ8 489 aaPredicted RBP4.07□□□□□ -1.76
RNU4-28P-201ENST00000364739 LARSQ9P2J5 1176 aaKnown RBP4.07□□□□□ -1.76
RNU4-28P-201ENST00000364739 CACNA1FO60840 1977 aa4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 A6NCN8 305 aa4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 HEPACAM2A8MVW5 462 aa4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 PSMD14O00487 310 aa4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 CTDSP2O14595 271 aa4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 PAPSS1O43252 624 aaPredicted RBP4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 SSX4O60224 188 aa4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 CREG1O75629 220 aa4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 PLA2G4BP0C869 781 aa4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 ITGA3P26006 1051 aa4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 GCH1P30793 250 aa4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 SLC15A1P46059 708 aa4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 PSMC6P62333 389 aa4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 MC1RQ01726 317 aa4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 IGSF11Q5DX21 431 aa4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 SLC16A9Q7RTY1 509 aa4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 C17orf53Q8N3J3 647 aaPredicted RBP4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 C1orf131Q8NDD1 294 aaKnown RBP4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 OR1J1Q8NGS3 322 aa4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 OR2AJ1Q8NGZ0 328 aa4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 HCAR2Q8TDS4 363 aa4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 HSD17B8Q92506 261 aa4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 ZNF653Q96CK0 615 aa4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 WBP1Q96G27 269 aa4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 ZNF599Q96NL3 588 aa4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 RTN4RQ9BZR6 473 aa4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 GHITMQ9H3K2 345 aa4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 FGF22Q9HCT0 170 aa4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 BLOC1S4Q9NUP1 217 aa4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 HAUS2Q9NVX0 235 aa4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 ARHGEF38Q9NXL2 777 aa4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 SUCLA2Q9P2R7 463 aaPredicted RBP4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 SEC63Q9UGP8 760 aaKnown RBP4.06□□□□□ -1.76
RNU4-28P-201ENST00000364739 ASTN2O75129 1339 aaPredicted RBP4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 A0A1W2PRB8 838 aa4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 MED19A0JLT2 244 aaPredicted RBP4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 LNP1A1A4G5 178 aa4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 FSD2A1L4K1 749 aa4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 OR2A25A4D2G3 310 aa4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 AGAP14A8MT82 685 aa4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 B4DLN1 442 aa4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 E9PI62 339 aa4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 XRCC3O43542 346 aa4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 CLPTM1O96005 669 aa4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 HMBSP08397 361 aa4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 MRPL12P52815 198 aaKnown RBP4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 GEMIN4P57678 1058 aaKnown RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms