RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 TMEM150CB9EJG8 249 aa20■□□□□ 0.79
CDC42BPB-201ENST00000361246 ID2Q02363 134 aa20■□□□□ 0.79
CDC42BPB-201ENST00000361246 C1orf94Q6P1W5 598 aa20■□□□□ 0.79
CDC42BPB-201ENST00000361246 TMEM156Q8N614 296 aa20■□□□□ 0.79
CDC42BPB-201ENST00000361246 PCDHGA3Q9Y5H0 932 aa20■□□□□ 0.79
CDC42BPB-201ENST00000361246 GBAP04062 536 aa20■□□□□ 0.79
CDC42BPB-201ENST00000361246 CLCQ05315 142 aa20■□□□□ 0.79
CDC42BPB-201ENST00000361246 GPR65Q8IYL9 337 aa20■□□□□ 0.79
CDC42BPB-201ENST00000361246 KLRF1Q9NZS2 232 aa20■□□□□ 0.79
CDC42BPB-201ENST00000361246 SCGNO76038 276 aa20■□□□□ 0.79
CDC42BPB-201ENST00000361246 IPO13O94829 963 aaKnown RBP20■□□□□ 0.79
CDC42BPB-201ENST00000361246 UBXN7O94888 489 aa20■□□□□ 0.79
CDC42BPB-201ENST00000361246 ARFIP1P53367 373 aa20■□□□□ 0.79
CDC42BPB-201ENST00000361246 PURAQ00577 322 aaKnown RBP20■□□□□ 0.79
CDC42BPB-201ENST00000361246 TPK1Q9H3S4 243 aa20■□□□□ 0.79
CDC42BPB-201ENST00000361246 RAPGEFL1Q9UHV5 662 aa20■□□□□ 0.79
CDC42BPB-201ENST00000361246 FAM86C2PA6NEL3 165 aa20■□□□□ 0.79
CDC42BPB-201ENST00000361246 METTL18O95568 372 aa20■□□□□ 0.79
CDC42BPB-201ENST00000361246 CD247P20963 164 aa20■□□□□ 0.79
CDC42BPB-201ENST00000361246 NDST2P52849 883 aa20■□□□□ 0.79
CDC42BPB-201ENST00000361246 ILF2Q12905 390 aaKnown RBP20■□□□□ 0.79
CDC42BPB-201ENST00000361246 INAVAQ3KP66 663 aa20■□□□□ 0.79
CDC42BPB-201ENST00000361246 TRIM74Q86UV6 250 aa20■□□□□ 0.79
CDC42BPB-201ENST00000361246 ALG3Q92685 438 aa20■□□□□ 0.79
CDC42BPB-201ENST00000361246 ABCB10Q9NRK6 738 aa20■□□□□ 0.79
CDC42BPB-201ENST00000361246 MARK1Q9P0L2 795 aa20■□□□□ 0.79
CDC42BPB-201ENST00000361246 MTRRQ9UBK8 725 aa20■□□□□ 0.79
CDC42BPB-201ENST00000361246 FTSJ1Q9UET6 329 aa20■□□□□ 0.79
CDC42BPB-201ENST00000361246 MED1Q15648 1581 aaPredicted RBP19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 CLDN7O95471 211 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 LINGO3P0C6S8 592 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 CEBPGP53567 150 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 GANABQ14697 944 aaKnown RBP19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 CLNKQ7Z7G1 428 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 TMC8Q8IU68 726 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 C7orf57Q8NEG2 295 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 CKAP2Q8WWK9 683 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 DSN1Q9H410 356 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 CDC7O00311 574 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 EIF1AYO14602 144 aaKnown RBP19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 TNFAIP8O95379 198 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 PSMG1O95456 288 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 VLDLRP98155 873 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 CRTC1Q6UUV9 634 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 SLC26A9Q7LBE3 791 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 TDP1Q9NUW8 608 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 COMMD9Q9P000 198 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 PPM1HQ9ULR3 514 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 TESMINQ9Y4I5 508 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 DHRS12A0PJE2 317 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 IRF9Q00978 393 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 CLEC20AQ6ZU45 233 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 FATE1Q969F0 183 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 DNAJB4Q9UDY4 337 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 LMO7Q8WWI1 1683 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 AP2A1O95782 977 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 SLC6A9P48067 706 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 LAPTM5Q13571 262 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 PUM1Q14671 1186 aaKnown RBP eCLIP19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 SNX33Q8WV41 574 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 SLC25A51Q9H1U9 297 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 L2HGDHQ9H9P8 463 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 PEX12O00623 359 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 ASNA1O43681 348 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 LYNP07948 512 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 KIR3DL1P43629 444 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 ELOAQ14241 798 aaKnown RBP19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 MINDY3Q9H8M7 445 aa19.99■□□□□ 0.79
CDC42BPB-201ENST00000361246 IFT172Q9UG01 1749 aa19.98■□□□□ 0.79
CDC42BPB-201ENST00000361246 HYKKA2RU49 373 aa19.98■□□□□ 0.79
CDC42BPB-201ENST00000361246 TRIM38O00635 465 aa19.98■□□□□ 0.79
CDC42BPB-201ENST00000361246 HDAC3O15379 428 aa19.98■□□□□ 0.79
CDC42BPB-201ENST00000361246 NRG3P56975 720 aa19.98■□□□□ 0.79
CDC42BPB-201ENST00000361246 C1orf61Q13536 156 aa19.98■□□□□ 0.79
CDC42BPB-201ENST00000361246 NEK5Q6P3R8 708 aa19.98■□□□□ 0.79
CDC42BPB-201ENST00000361246 KBTBD7Q8WVZ9 684 aa19.98■□□□□ 0.79
CDC42BPB-201ENST00000361246 MYDGFQ969H8 173 aa19.98■□□□□ 0.79
CDC42BPB-201ENST00000361246 RSL1D1O76021 490 aaKnown RBP19.98■□□□□ 0.79
CDC42BPB-201ENST00000361246 CHRNA6Q15825 494 aa19.98■□□□□ 0.79
CDC42BPB-201ENST00000361246 ABHD13Q7L211 337 aa19.98■□□□□ 0.79
CDC42BPB-201ENST00000361246 CYP2U1Q7Z449 544 aa19.98■□□□□ 0.79
CDC42BPB-201ENST00000361246 MR1Q95460 341 aa19.98■□□□□ 0.79
CDC42BPB-201ENST00000361246 ARHGEF33A8MVX0 844 aa19.98■□□□□ 0.79
CDC42BPB-201ENST00000361246 PER3P56645 1201 aa19.98■□□□□ 0.79
CDC42BPB-201ENST00000361246 DTNBP1Q96EV8 351 aa19.98■□□□□ 0.79
CDC42BPB-201ENST00000361246 IL10RBQ08334 325 aa19.98■□□□□ 0.79
CDC42BPB-201ENST00000361246 OLIG2Q13516 323 aa19.98■□□□□ 0.79
CDC42BPB-201ENST00000361246 TAF1AQ15573 450 aaPredicted RBP19.98■□□□□ 0.79
CDC42BPB-201ENST00000361246 PDK4Q16654 411 aa19.98■□□□□ 0.79
CDC42BPB-201ENST00000361246 LYSMD3Q7Z3D4 306 aa19.98■□□□□ 0.79
CDC42BPB-201ENST00000361246 PIWIL4Q7Z3Z4 852 aaKnown RBP19.98■□□□□ 0.79
CDC42BPB-201ENST00000361246 C4orf32Q8N8J7 132 aa19.98■□□□□ 0.79
CDC42BPB-201ENST00000361246 OR2T12Q8NG77 320 aa19.98■□□□□ 0.79
CDC42BPB-201ENST00000361246 OR2AJ1Q8NGZ0 328 aa19.98■□□□□ 0.79
CDC42BPB-201ENST00000361246 C1GALT1C1Q96EU7 318 aa19.98■□□□□ 0.79
CDC42BPB-201ENST00000361246 FZD3Q9NPG1 666 aa19.98■□□□□ 0.79
CDC42BPB-201ENST00000361246 CKLFQ9UBR5 152 aa19.98■□□□□ 0.79
CDC42BPB-201ENST00000361246 MIPEPQ99797 713 aa19.98■□□□□ 0.79
CDC42BPB-201ENST00000361246 IL21RQ9HBE5 538 aa19.98■□□□□ 0.79
CDC42BPB-201ENST00000361246 TAC3Q9UHF0 121 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms