RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 PIGXQ8TBF5 258 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 LRRC7Q96NW7 1537 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 CADM1Q9BY67 442 aaKnown RBP13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 HCN1O60741 890 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 AVPR1BP47901 424 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 MLLT6P55198 1093 aaPredicted RBP13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 PGM2L1Q6PCE3 622 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 NATD1Q8N6N6 113 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 PRELID2Q8N945 189 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 ASCC1Q8N9N2 400 aaKnown RBP13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 ZNF700Q9H0M5 742 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 CEMIPQ8WUJ3 1361 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 PDYNP01213 254 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 ZNF823P16415 610 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 CAP2P40123 477 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 SSR2P43308 183 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 MC1RQ01726 317 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 SLC10A7Q0GE19 358 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 BORAQ6PGQ7 559 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 LGR4Q9BXB1 951 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 OSBPL7Q9BZF2 842 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 MIR1-1HGQ9H1L0 117 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 DPAGT1Q9H3H5 408 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 MRPL42Q9Y6G3 142 aaKnown RBP13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 TTC3P53804 2025 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 PSMD9O00233 223 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 MAMLD1Q13495 774 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 DCST1Q5T197 706 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 DEFB128Q7Z7B8 93 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 DCSTAMPQ9H295 470 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 OR12D3Q9UGF7 316 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 FAM205AQ6ZU69 1335 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 GPR75-ASB3A0A0A6YYF3 556 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 ZNF705EA8MWA4 302 aaPredicted RBP13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 B8ZZF3 427 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 SSX5O60225 188 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 CYP1A2P05177 515 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 ZNF662Q6ZS27 426 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 SLC44A3Q8N4M1 653 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 ZSCAN4Q8NAM6 433 aaPredicted RBP13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 KAT2AQ92830 837 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 GTPBP3Q969Y2 492 aaKnown RBP13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 RBM18Q96H35 190 aaKnown RBP13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 ZNF649Q9BS31 505 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 ISM1B1AKI9 464 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 ACKR2O00590 384 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 EPHX2P34913 555 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 MAGEA8P43361 318 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 RPIAP49247 311 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 GMPSP49915 693 aaPredicted RBP13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 ZNF81P51508 661 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 CLCN7P51798 805 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 SEMA5AQ13591 1074 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 RAB39AQ14964 217 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 DLG2Q15700 870 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 DNAJB3Q8WWF6 145 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 DNASE1L2Q92874 299 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 C16orf58Q96GQ5 468 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 FERD3LQ96RJ6 166 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 A0A0G2JMP0 313 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 IFNA21P01568 189 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 IL1R1P14778 569 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 CPSF6Q16630 551 aaKnown RBP eCLIP13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 KLHL22Q53GT1 634 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 ZNF709Q8N972 641 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 OR4M2Q8NGB6 313 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 OR4C15Q8NGM1 316 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 HSFY1Q96LI6 401 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 SPATC1LQ9H0A9 340 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 RUVBL1Q9Y265 456 aaKnown RBP13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 DISC1C4P0D8 188 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 E9PAM4 449 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 SLC25A14O95258 325 aaPredicted RBP13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 LINGO3P0C6S8 592 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 SLC35G6P0C7Q6 338 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 RPS3P23396 243 aaKnown RBP eCLIP13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 OR3A3P47888 321 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 OR3A2P47893 321 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 SSX6Q7RTT6 188 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 TOMM5Q8N4H5 51 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 GRIN3AQ8TCU5 1115 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 ZFAND2BQ8WV99 257 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 PWWP2AQ96N64 755 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 TSNAXQ99598 290 aaKnown RBP13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 AGO4Q9HCK5 861 aaKnown RBP13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 VIRMAQ69YN4 1812 aaKnown RBP13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 ZNF638Q14966 1978 aaKnown RBP13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 FBP2O00757 339 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 DHX15O43143 795 aaKnown RBP13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 TSPAN1O60635 241 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 MFSD5Q6N075 450 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 OR2AJ1Q8NGZ0 328 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 KLHL33A6NCF5 533 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 BTNL10A8MVZ5 291 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 APODP05090 189 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 CSN2P05814 226 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 UROSP10746 265 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 CCKBRP32239 447 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 FNTBP49356 437 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 PPP4CP60510 307 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms