RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 PHF12Q96QT6 1004 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 BAIAP2Q9UQB8 552 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 YDJCA8MPS7 323 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 MPIP34949 423 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 ACTR1BP42025 376 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 CTBP1Q13363 440 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 CRTC2Q53ET0 693 aaPredicted RBP9.55□□□□□ -0.88
CUX1-203ENST00000360264 C11orf84Q9BUA3 381 aaPredicted RBP9.55□□□□□ -0.88
CUX1-203ENST00000360264 PCDHGA11Q9Y5H2 935 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.55□□□□□ -0.883e-7■■■■■ 26.8
CUX1-203ENST00000360264 NME6O75414 186 aaPredicted RBP9.55□□□□□ -0.88
CUX1-203ENST00000360264 SNTA1Q13424 505 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 LRRC69Q6ZNQ3 347 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 COX18Q8N8Q8 333 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 MCFD2Q8NI22 146 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 CNDP2Q96KP4 475 aaKnown RBP9.55□□□□□ -0.88
CUX1-203ENST00000360264 SPIN1Q9Y657 262 aaPredicted RBP9.55□□□□□ -0.88
CUX1-203ENST00000360264 VIRMAQ69YN4 1812 aaKnown RBP9.55□□□□□ -0.88
CUX1-203ENST00000360264 WNT9AO14904 365 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 PKMP14618 531 aaKnown RBP9.55□□□□□ -0.88
CUX1-203ENST00000360264 GHRHRQ02643 423 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 EHD1Q9H4M9 534 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 ALG2Q9H553 416 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 ASB3Q9Y575 518 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 CDK5RAP2Q96SN8 1893 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 A0A1W2PQ45 241 aaPredicted RBP9.55□□□□□ -0.88
CUX1-203ENST00000360264 A0A1W2PQY0 241 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 TPD52L2O43399 206 aaKnown RBP9.55□□□□□ -0.88
CUX1-203ENST00000360264 ZNF823P16415 610 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 NSG1P42857 185 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 KCNA10Q16322 511 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 PLPP4Q5VZY2 271 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 P4HA3Q7Z4N8 544 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 AMZ2Q86W34 360 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 GHDCQ8N2G8 530 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 MINDY2Q8NBR6 621 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 IPPKQ9H8X2 491 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 LYPLA1O75608 230 aaPredicted RBP9.55□□□□□ -0.88
CUX1-203ENST00000360264 OR1D2P34982 312 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 PSRC1Q6PGN9 363 aaPredicted RBP9.55□□□□□ -0.88
CUX1-203ENST00000360264 PACS2Q86VP3 889 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 NAT16Q8N8M0 369 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 NKD2Q969F2 451 aaPredicted RBP9.55□□□□□ -0.88
CUX1-203ENST00000360264 AGAP2Q99490 1192 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 PCDHB11Q9Y5F2 797 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 TM7SF2O76062 418 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 RHBDL3P58872 404 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 KCTD8Q6ZWB6 473 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 AHSA2Q719I0 299 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 NPAS4Q8IUM7 802 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 AGAP11Q8TF27 550 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 TMEM125Q96AQ2 219 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 DUXAA6NLW8 204 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 ROR2Q01974 943 aaKnown RBP9.55□□□□□ -0.88
CUX1-203ENST00000360264 PDCD4Q53EL6 469 aaKnown RBP9.55□□□□□ -0.88
CUX1-203ENST00000360264 LRIF1Q5T3J3 769 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 TRPM4Q8TD43 1214 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 ACBD6Q9BR61 282 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 NIFKQ9BYG3 293 aaKnown RBP9.55□□□□□ -0.88
CUX1-203ENST00000360264 MAPK3P27361 379 aaPredicted RBP9.55□□□□□ -0.88
CUX1-203ENST00000360264 TXNL4AP83876 142 aaKnown RBP9.55□□□□□ -0.88
CUX1-203ENST00000360264 TWIST2Q8WVJ9 160 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 SLC44A1Q8WWI5 657 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 RIF1Q5UIP0 2472 aaKnown RBP9.54□□□□□ -0.88
CUX1-203ENST00000360264 MAGEB17A8MXT2 336 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 TNFRSF10BO14763 440 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 CDH13P55290 713 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 LRRC32Q14392 662 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 MINDY4Q4G0A6 757 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 ZNF570Q96NI8 536 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 S100A14Q9HCY8 104 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 DDX4Q9NQI0 724 aaKnown RBP9.54□□□□□ -0.88
CUX1-203ENST00000360264 CNOT6Q9ULM6 557 aaKnown RBP9.54□□□□□ -0.88
CUX1-203ENST00000360264 FAM153BP0C7A2 387 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 TIE1P35590 1138 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 TSPAN5P62079 268 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 SLC25A3Q00325 362 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 CAP1Q01518 475 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 RBM20Q5T481 1227 aaKnown RBP9.54□□□□□ -0.88
CUX1-203ENST00000360264 C12orf40Q86WS4 652 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 DUSP9Q99956 384 aaKnown RBP9.54□□□□□ -0.88
CUX1-203ENST00000360264 FAM234BA2RU67 622 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 TAF1AQ15573 450 aaPredicted RBP9.54□□□□□ -0.88
CUX1-203ENST00000360264 GPR151Q8TDV0 419 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 LENG1Q96BZ8 264 aaPredicted RBP9.54□□□□□ -0.88
CUX1-203ENST00000360264 CENPNQ96H22 339 aaPredicted RBP9.54□□□□□ -0.88
CUX1-203ENST00000360264 CHST7Q9NS84 486 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 CLEC4AQ9UMR7 237 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 A0A1W2PQH9 124 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 FAM172BPA6NC97 362 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 TNFP01375 233 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 SLC5A3P53794 718 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 DUSP4Q13115 394 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 PRKD1Q15139 912 aaPredicted RBP9.54□□□□□ -0.88
CUX1-203ENST00000360264 ARSJQ5FYB0 599 aaPredicted RBP9.54□□□□□ -0.88
CUX1-203ENST00000360264 ZYG11AQ6WRX3 759 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 TCF7L1Q9HCS4 588 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 ZNF432O94892 652 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 ALPPP05187 535 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 ITPKAP23677 461 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms