RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 RPL10LQ96L21 214 aaKnown RBP4.79□□□□□ -1.64
SCN3A-202ENST00000360093 TRIB3Q96RU7 358 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 KCNN2Q9H2S1 579 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 RNF39Q9H2S5 420 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 FBRSQ9HAH7 460 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 IL23AQ9NPF7 189 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 ARL5AQ9Y689 179 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 CITO14578 2027 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 FAM234BA2RU67 622 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 PRORSD1PA6NEY8 169 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 MAGEB17A8MXT2 336 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 PRAMEF11O60813 436 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 NT5EP21589 574 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 TMED10P49755 219 aaKnown RBP4.79□□□□□ -1.64
SCN3A-202ENST00000360093 CLDN10P78369 228 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 SEMA3AQ14563 771 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 AAK1Q2M2I8 961 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 SLC35G1Q2M3R5 365 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 CXXC5Q7LFL8 322 aaKnown RBP4.79□□□□□ -1.64
SCN3A-202ENST00000360093 ANKLE1Q8NAG6 615 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 S100ZQ8WXG8 99 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 C12orf66Q96MD2 445 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 TSSK3Q96PN8 268 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 RERGLQ9H628 205 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 CCSER2Q9H7U1 834 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 PALMDQ9NP74 551 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 KLHL1Q9NR64 748 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 ZDHHC18Q9NUE0 388 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 ZMYND8Q9ULU4 1186 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-202ENST00000360093 RAB26Q9ULW5 256 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 TEX264Q9Y6I9 313 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 LAMA4Q16363 1823 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 METTL18O95568 372 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 CHRNA1P02708 482 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 FABP3P05413 133 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 TYRP14679 529 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 CDK9P50750 372 aaKnown RBP4.79□□□□□ -1.64
SCN3A-202ENST00000360093 C17orf99Q6UX52 265 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 IKBIPQ70UQ0 350 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 CHST15Q7LFX5 561 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-202ENST00000360093 DENND6AQ8IWF6 608 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 DDX1Q92499 740 aaKnown RBP4.79□□□□□ -1.64
SCN3A-202ENST00000360093 NPAS2Q99743 824 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 SMOQ99835 787 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 BRINP2Q9C0B6 783 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 HHATLQ9HCP6 504 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 OXSMQ9NWU1 459 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 CD84Q9UIB8 345 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 COL16A1Q07092 1604 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-202ENST00000360093 ENO4A6NNW6 628 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 LIN7AO14910 233 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-202ENST00000360093 KMOO15229 486 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 SLC31A1O15431 190 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 CYP11A1P05108 521 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 PRPS1L1P21108 318 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 SP100P23497 879 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-202ENST00000360093 KHKP50053 298 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 CA9Q16790 459 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 MORN1Q5T089 497 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 TMC5Q6UXY8 1006 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 ZNF730Q6ZMV8 503 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 PEG10Q86TG7 708 aaKnown RBP4.79□□□□□ -1.64
SCN3A-202ENST00000360093 CLVS1Q8IUQ0 354 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-202ENST00000360093 SIDT2Q8NBJ9 832 aaKnown RBP4.79□□□□□ -1.64
SCN3A-202ENST00000360093 ZNF296Q8WUU4 475 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-202ENST00000360093 RFKQ969G6 155 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 RGMAQ96B86 450 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 SIPA1Q96FS4 1042 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 NECTIN4Q96NY8 510 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 SIX4Q9UIU6 781 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 ACSL5Q9ULC5 683 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 SSR3Q9UNL2 185 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 CAPN14A8MX76 684 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 H3BNX3 289 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 NPPAP01160 153 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 CAPN1P07384 714 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 MYL9P24844 172 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 SLC9A5Q14940 896 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 UBXN2BQ14CS0 331 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 SUZ12Q15022 739 aaKnown RBP4.78□□□□□ -1.64
SCN3A-202ENST00000360093 PDK3Q15120 406 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 FBXO46Q6PJ61 603 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-202ENST00000360093 PTCHD4Q6ZW05 846 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 ZNF671Q8TAW3 534 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 TMEM209Q96SK2 561 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 MYOCQ99972 504 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 MCMBPQ9BTE3 642 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 C6orf62Q9GZU0 229 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-202ENST00000360093 SPRTNQ9H040 489 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-202ENST00000360093 CLDND1Q9NY35 253 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 LZTS1Q9Y250 596 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 A0A1B0GUL6 1792 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 PDPK1O15530 556 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 TBX18O95935 607 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 IFNW1P05000 195 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 ALDH4A1P30038 563 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 WASP42768 502 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 ATXN1P54253 815 aaKnown RBP4.78□□□□□ -1.64
SCN3A-202ENST00000360093 GDF10P55107 478 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 GSCP56915 257 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms