RNA–Protein interactions for RNA: ENST00000358971.7

SEPSECS-201, Transcript of Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase, humanhuman

TSL 1 (best)

Gene SEPSECS, Length 3,344 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPSECS-201ENST00000358971 RDM1Q8NG50 284 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 SLC4A9Q96Q91 983 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 UGT2B28Q9BY64 529 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 CCNB1IP1Q9NPC3 277 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 CISHQ9NSE2 258 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 COPS3Q9UNS2 423 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 STON1Q9Y6Q2 735 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 U3KQ87 197 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 NHSL1Q5SYE7 1610 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 ADGRA2Q96PE1 1338 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 IGKV6D-41A0A0C4DH26 115 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 F8W810 466 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 HMGN1P05114 100 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 HOXB3P14651 431 aaPredicted RBP11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 YWHABP31946 246 aaKnown RBP11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 RPS8P62241 208 aaKnown RBP11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 IL18R1Q13478 541 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 ERFEQ4G0M1 354 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 KLHL12Q53G59 568 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 PRSS36Q5K4E3 855 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 TIGD3Q6B0B8 471 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 ZNF704Q6ZNC4 412 aaPredicted RBP11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 LARP4Q71RC2 724 aaKnown RBP eCLIP11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 KCNMB4Q86W47 210 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 PM20D2Q8IYS1 436 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 CENPLQ8N0S6 344 aaPredicted RBP11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 OR52K1Q8NGK4 314 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 NXPE3Q969Y0 559 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 COQ8BQ96D53 544 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 PHF21BQ96EK2 531 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 TNIP3Q96KP6 325 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 C3orf30Q96M34 536 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 FAM129BQ96TA1 746 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 AKTIPQ9H8T0 292 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 SP110Q9HB58 689 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 RDH8Q9NYR8 311 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 EMC3Q9P0I2 261 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 DNAJB9Q9UBS3 223 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 CYTH4Q9UIA0 394 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 OAS3Q9Y6K5 1087 aaKnown RBP11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 SH3BP5O60239 455 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 DFNA5O60443 496 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 RNGTTO60942 597 aaKnown RBP11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 MITFO75030 526 aaPredicted RBP11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 ALPPP05187 535 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 SLC35E2BP0CK96 405 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 PPP3CCP48454 512 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 S100A12P80511 92 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 ZNF273Q14593 569 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 TATDN3Q17R31 274 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 KLHL17Q6TDP4 642 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 PLET1Q6UQ28 207 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 XYLT1Q86Y38 959 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 P3H2Q8IVL5 708 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 OSCARQ8IYS5 282 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 DCP1BQ8IZD4 617 aaKnown RBP11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 TUBGCP3Q96CW5 907 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 TBCDQ9BTW9 1192 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 KATNAL1Q9BW62 490 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 BFARQ9NZS9 450 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 REV1Q9UBZ9 1251 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 RNF112Q9ULX5 631 aa11.24□□□□□ -0.61
SEPSECS-201ENST00000358971 FGF18O76093 207 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 PRSS23O95084 383 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 KCNA5P22460 613 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 ATP5F1P24539 256 aaPredicted RBP11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 GRK5P34947 590 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 PIK3CBP42338 1070 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 GBX2P52951 348 aaPredicted RBP11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 MCCD1P59942 119 aaPredicted RBP11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 HOXC5Q00444 222 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 MAB21L1Q13394 359 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 LAIR1Q6GTX8 287 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 FAM160B2Q86V87 743 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 NETO2Q8NC67 525 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 OR5B17Q8NGF7 314 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 C19orf60Q96EN9 201 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 TMEM168Q9H0V1 697 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 SPON1Q9HCB6 807 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 FBXO10Q9UK96 956 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 PCDHGB3Q9Y5G1 929 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 TRAV20A0A0B4J274 112 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 TARM1B6A8C7 271 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 GMDSO60547 372 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 PEX14O75381 377 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 HSMCR30P0CW71 290 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 HOXD8P13378 290 aaPredicted RBP11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 JUNDP17535 347 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 CYP2F1P24903 491 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 POU1F1P28069 291 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 PSMB4P28070 264 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 ETV6P41212 452 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 KCNC1P48547 511 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 RAB14P61106 215 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 PLIN5Q00G26 463 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 HYAL2Q12891 473 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 GRK1Q15835 563 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 TMPRSS11AQ6ZMR5 421 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 DPH6Q7L8W6 267 aa11.23□□□□□ -0.61
SEPSECS-201ENST00000358971 GPAT4Q86UL3 456 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms