RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 NUP62P37198 522 aaPredicted RBP13.52□□□□□ -0.24
VCP-201ENST00000358901 EEFSECP57772 596 aaKnown RBP13.52□□□□□ -0.24
VCP-201ENST00000358901 TAS2R41P59536 307 aa13.52□□□□□ -0.24
VCP-201ENST00000358901 SNAPC1Q16533 368 aa13.52□□□□□ -0.24
VCP-201ENST00000358901 KRT74Q7RTS7 529 aa13.52□□□□□ -0.24
VCP-201ENST00000358901 KAT8Q9H7Z6 458 aaKnown RBP13.52□□□□□ -0.24
VCP-201ENST00000358901 LIN28AQ9H9Z2 209 aaKnown RBP13.52□□□□□ -0.24
VCP-201ENST00000358901 CPQQ9Y646 472 aa13.52□□□□□ -0.24
VCP-201ENST00000358901 MYH11P35749 1972 aa13.52□□□□□ -0.24
VCP-201ENST00000358901 CDC7O00311 574 aa13.52□□□□□ -0.25
VCP-201ENST00000358901 GRM6O15303 877 aa13.52□□□□□ -0.25
VCP-201ENST00000358901 PITX1P78337 314 aaPredicted RBP13.52□□□□□ -0.25
VCP-201ENST00000358901 BNIP3Q12983 259 aa13.52□□□□□ -0.25
VCP-201ENST00000358901 CCNIQ14094 377 aa13.52□□□□□ -0.25
VCP-201ENST00000358901 ZBTB6Q15916 424 aa13.52□□□□□ -0.25
VCP-201ENST00000358901 CFAP206Q8IYR0 622 aa13.52□□□□□ -0.25
VCP-201ENST00000358901 ZDHHC14Q8IZN3 488 aa13.52□□□□□ -0.25
VCP-201ENST00000358901 POMGNT2Q8NAT1 580 aa13.52□□□□□ -0.25
VCP-201ENST00000358901 CGREF1Q99674 301 aa13.52□□□□□ -0.25
VCP-201ENST00000358901 IGFLR1Q9H665 355 aa13.52□□□□□ -0.25
VCP-201ENST00000358901 NCKAP1Q9Y2A7 1128 aa13.52□□□□□ -0.25
VCP-201ENST00000358901 RGPD8O14715 1765 aaPredicted RBP13.52□□□□□ -0.25
VCP-201ENST00000358901 A0A1W2PQ67 120 aa13.52□□□□□ -0.25
VCP-201ENST00000358901 BCAS2O75934 225 aaPredicted RBP13.52□□□□□ -0.25
VCP-201ENST00000358901 NSG1P42857 185 aa13.52□□□□□ -0.25
VCP-201ENST00000358901 ZNF132P52740 706 aa13.52□□□□□ -0.25
VCP-201ENST00000358901 SKP1P63208 163 aa13.52□□□□□ -0.25
VCP-201ENST00000358901 SULT2A1Q06520 285 aa13.52□□□□□ -0.25
VCP-201ENST00000358901 TRIM32Q13049 653 aa13.52□□□□□ -0.25
VCP-201ENST00000358901 RABL3Q5HYI8 236 aa13.52□□□□□ -0.25
VCP-201ENST00000358901 PRSS55Q6UWB4 352 aaPredicted RBP13.52□□□□□ -0.25
VCP-201ENST00000358901 COMMD2Q86X83 199 aa13.52□□□□□ -0.25
VCP-201ENST00000358901 EXOSC8Q96B26 276 aaKnown RBP13.52□□□□□ -0.25
VCP-201ENST00000358901 SMOQ99835 787 aa13.52□□□□□ -0.25
VCP-201ENST00000358901 AIF1LQ9BQI0 150 aa13.52□□□□□ -0.25
VCP-201ENST00000358901 COPS4Q9BT78 406 aa13.52□□□□□ -0.25
VCP-201ENST00000358901 GKN1Q9NS71 199 aa13.52□□□□□ -0.25
VCP-201ENST00000358901 SEMA3GQ9NS98 782 aa13.52□□□□□ -0.25
VCP-201ENST00000358901 GULP1Q9UBP9 304 aa13.52□□□□□ -0.25
VCP-201ENST00000358901 COQ6Q9Y2Z9 468 aa13.52□□□□□ -0.25
VCP-201ENST00000358901 OR10H1Q9Y4A9 318 aa13.52□□□□□ -0.25
VCP-201ENST00000358901 NFKBIEO00221 500 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 PGRMC2O15173 223 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 OR10H2O60403 315 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 PRKD3O94806 890 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 HLA-DQA2P01906 255 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 ENO2P09104 434 aaPredicted RBP13.51□□□□□ -0.25
VCP-201ENST00000358901 ACVRL1P37023 503 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 IL18R1Q13478 541 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 ZNHIT3Q15649 155 aaPredicted RBP13.51□□□□□ -0.25
VCP-201ENST00000358901 NOL9Q5SY16 702 aaKnown RBP13.51□□□□□ -0.25
VCP-201ENST00000358901 MOCOSQ96EN8 888 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 PRR11Q96HE9 360 aaPredicted RBP13.51□□□□□ -0.25
VCP-201ENST00000358901 FERD3LQ96RJ6 166 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 RSPH9Q9H1X1 276 aaPredicted RBP13.51□□□□□ -0.25
VCP-201ENST00000358901 PRDM8Q9NQV8 689 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 AASDHPPTQ9NRN7 309 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 KERAO60938 352 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 RSL1D1O76021 490 aaKnown RBP13.51□□□□□ -0.25
VCP-201ENST00000358901 AP2A2O94973 939 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 IFNA16P05015 189 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 MXD1Q05195 221 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 PLA2G4EQ3MJ16 856 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 RFTN2Q52LD8 501 aaPredicted RBP13.51□□□□□ -0.25
VCP-201ENST00000358901 LRRC73Q5JTD7 316 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 ZDHHC20Q5W0Z9 365 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 ERI1Q8IV48 349 aaKnown RBP13.51□□□□□ -0.25
VCP-201ENST00000358901 DBF4BQ8NFT6 615 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 ART5Q96L15 291 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 TMEM74Q96NL1 305 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 RPRD1BQ9NQG5 326 aaKnown RBP13.51□□□□□ -0.25
VCP-201ENST00000358901 GDAP2Q9NXN4 497 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 PPM1AP35813 382 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 STAT5AP42229 794 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 CYP4F8P98187 520 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 SYT16Q17RD7 645 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 LRRC17Q8N6Y2 441 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 RAD51AP1Q96B01 352 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 DIRAS2Q96HU8 199 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 GPATCH1Q9BRR8 931 aaKnown RBP13.51□□□□□ -0.25
VCP-201ENST00000358901 HIPK3Q9H422 1215 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 CYTH4Q9UIA0 394 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 HS3ST4Q9Y661 456 aa13.51□□□□□ -0.25
VCP-201ENST00000358901 SSNA1O43805 119 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 PSIP1O75475 530 aaKnown RBP13.5□□□□□ -0.25
VCP-201ENST00000358901 SELPP16109 830 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 MYL9P24844 172 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 CBX2Q14781 532 aaPredicted RBP13.5□□□□□ -0.25
VCP-201ENST00000358901 ZBED5Q49AG3 693 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 ZNF697Q5TEC3 545 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 PDE12Q6L8Q7 609 aaKnown RBP13.5□□□□□ -0.25
VCP-201ENST00000358901 MED27Q6P2C8 311 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 C15orf39Q6ZRI6 1047 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 KAT2AQ92830 837 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 NARS2Q96I59 477 aaKnown RBP13.5□□□□□ -0.25
VCP-201ENST00000358901 FAM210AQ96ND0 272 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 PCYT2Q99447 389 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 ZSCAN32Q9NX65 697 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 ZNF510Q9Y2H8 683 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 ZNF780BQ9Y6R6 833 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms