RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 ZNF540Q8NDQ6 660 aa13.15□□□□□ -0.3
NCDN-201ENST00000356090 NDNFQ8TB73 568 aa13.15□□□□□ -0.3
NCDN-201ENST00000356090 BRI3BPQ8WY22 251 aa13.15□□□□□ -0.3
NCDN-201ENST00000356090 FAM193BQ96PV7 902 aaPredicted RBP13.15□□□□□ -0.3
NCDN-201ENST00000356090 CARS2Q9HA77 564 aaKnown RBP13.15□□□□□ -0.3
NCDN-201ENST00000356090 FARSBQ9NSD9 589 aaKnown RBP13.15□□□□□ -0.3
NCDN-201ENST00000356090 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.15□□□□□ -0.3
NCDN-201ENST00000356090 H0Y858 1186 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 hCG_2039718K7EN88 272 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 TULP3O75386 442 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 DLGAP3O95886 979 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 HPCAL1P37235 193 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 CTU2Q2VPK5 515 aaKnown RBP13.14□□□□□ -0.31
NCDN-201ENST00000356090 FAM171BQ6P995 826 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 RBM23Q86U06 439 aaKnown RBP13.14□□□□□ -0.31
NCDN-201ENST00000356090 CLDN19Q8N6F1 224 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 CHDHQ8NE62 594 aaPredicted RBP13.14□□□□□ -0.31
NCDN-201ENST00000356090 MYEOVQ96EZ4 313 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 NSMCE3Q96MG7 304 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 HEPHQ9BQS7 1158 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 NEURL2Q9BR09 285 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 KATNAL1Q9BW62 490 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 AMBRA1Q9C0C7 1298 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 C6orf62Q9GZU0 229 aaPredicted RBP13.14□□□□□ -0.31
NCDN-201ENST00000356090 ATP13A1Q9HD20 1204 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 ERVK-18Q9QC07 812 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 DNAJB9Q9UBS3 223 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 TLR6Q9Y2C9 796 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 ARHGDIAP52565 204 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 HK3P52790 923 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 TPTEP56180 551 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 NCS1P62166 190 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 ZNF598Q86UK7 904 aaKnown RBP13.14□□□□□ -0.31
NCDN-201ENST00000356090 ADHFE1Q8IWW8 467 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 LIX1Q8N485 282 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 ATG16L2Q8NAA4 619 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 BTN2A3PQ96KV6 586 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 ZBED2Q9BTP6 218 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 C8orf4Q9NR00 106 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 VPS51Q9UID3 782 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 GIT1Q9Y2X7 761 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 MYADML2A6NDP7 307 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 FAM20BO75063 409 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 SEC24AO95486 1093 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 RPS17P08708 135 aaKnown RBP13.14□□□□□ -0.31
NCDN-201ENST00000356090 HOXB8P17481 243 aaPredicted RBP13.14□□□□□ -0.31
NCDN-201ENST00000356090 OXCT1P55809 520 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 IL10RBQ08334 325 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 SERINC3Q13530 473 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 GTF2H2Q13888 395 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 SYT16Q17RD7 645 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 XAF1Q6GPH4 301 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 GTF2H2CQ6P1K8 395 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 ANGPTL8Q6UXH0 198 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 ADAMTS16Q8TE57 1224 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 CHPT1Q8WUD6 406 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 SH3YL1Q96HL8 342 aaPredicted RBP13.14□□□□□ -0.31
NCDN-201ENST00000356090 IKZF5Q9H5V7 419 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 CCSER2Q9H7U1 834 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 FLRT1Q9NZU1 646 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 ZIM2Q9NZV7 527 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 UBA2Q9UBT2 640 aaPredicted RBP13.14□□□□□ -0.31
NCDN-201ENST00000356090 ATP11BQ9Y2G3 1177 aa13.14□□□□□ -0.31
NCDN-201ENST00000356090 ZNF99A8MXY4 864 aaPredicted RBP13.13□□□□□ -0.31
NCDN-201ENST00000356090 SLC1A7O00341 560 aa13.13□□□□□ -0.31
NCDN-201ENST00000356090 CNOT3O75175 753 aaKnown RBP13.13□□□□□ -0.31
NCDN-201ENST00000356090 SEC14L2O76054 403 aa13.13□□□□□ -0.31
NCDN-201ENST00000356090 IGLV3-25P01717 112 aa13.13□□□□□ -0.31
NCDN-201ENST00000356090 C7P10643 843 aa13.13□□□□□ -0.31
NCDN-201ENST00000356090 OGNP20774 298 aaKnown RBP13.13□□□□□ -0.31
NCDN-201ENST00000356090 SERPINB1P30740 379 aa13.13□□□□□ -0.31
NCDN-201ENST00000356090 SERPINB10P48595 397 aa13.13□□□□□ -0.31
NCDN-201ENST00000356090 TUSC3Q13454 348 aa13.13□□□□□ -0.31
NCDN-201ENST00000356090 NKG7Q16617 165 aa13.13□□□□□ -0.31
NCDN-201ENST00000356090 CTXN3Q4LDR2 81 aa13.13□□□□□ -0.31
NCDN-201ENST00000356090 CCDC92Q53HC0 331 aaPredicted RBP13.13□□□□□ -0.31
NCDN-201ENST00000356090 PTRH1Q86Y79 214 aaKnown RBP13.13□□□□□ -0.31
NCDN-201ENST00000356090 COLGALT2Q8IYK4 626 aa13.13□□□□□ -0.31
NCDN-201ENST00000356090 RBM4BQ9BQ04 359 aaKnown RBP13.13□□□□□ -0.31
NCDN-201ENST00000356090 TUBA1CQ9BQE3 449 aa13.13□□□□□ -0.31
NCDN-201ENST00000356090 RHNO1Q9BSD3 238 aa13.13□□□□□ -0.31
NCDN-201ENST00000356090 RBM4Q9BWF3 364 aaKnown RBP13.13□□□□□ -0.31
NCDN-201ENST00000356090 NUSAP1Q9BXS6 441 aaKnown RBP13.13□□□□□ -0.31
NCDN-201ENST00000356090 YTHDF1Q9BYJ9 559 aaKnown RBP13.13□□□□□ -0.31
NCDN-201ENST00000356090 PARVBQ9HBI1 364 aa13.13□□□□□ -0.31
NCDN-201ENST00000356090 ITM2CQ9NQX7 267 aa13.13□□□□□ -0.31
NCDN-201ENST00000356090 TMEM248Q9NWD8 314 aa13.13□□□□□ -0.31
NCDN-201ENST00000356090 SCN3BQ9NY72 215 aa13.13□□□□□ -0.31
NCDN-201ENST00000356090 PCDHGA4Q9Y5G9 962 aa13.13□□□□□ -0.31
NCDN-201ENST00000356090 UPK3BL1B0FP48 263 aa13.13□□□□□ -0.31
NCDN-201ENST00000356090 UPK3BL2E5RIL1 263 aa13.13□□□□□ -0.31
NCDN-201ENST00000356090 NBNO60934 754 aa13.13□□□□□ -0.31
NCDN-201ENST00000356090 LPOP22079 712 aaPredicted RBP13.13□□□□□ -0.31
NCDN-201ENST00000356090 TGFBR1P36897 503 aa13.13□□□□□ -0.31
NCDN-201ENST00000356090 SLC13A2Q13183 592 aa13.13□□□□□ -0.31
NCDN-201ENST00000356090 PWP1Q13610 501 aa13.13□□□□□ -0.31
NCDN-201ENST00000356090 RAPSNQ13702 412 aa13.13□□□□□ -0.31
NCDN-201ENST00000356090 SMN1Q16637 294 aaKnown RBP13.13□□□□□ -0.31
NCDN-201ENST00000356090 RBM48Q5RL73 367 aaKnown RBP13.13□□□□□ -0.31
NCDN-201ENST00000356090 CACHD1Q5VU97 1274 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms