RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 UBDO15205 165 aa16.87■□□□□ 0.29
VPS13B-201ENST00000355155 EPHX1P07099 455 aa16.87■□□□□ 0.29
VPS13B-201ENST00000355155 ANXA5P08758 320 aa16.87■□□□□ 0.29
VPS13B-201ENST00000355155 EBLN1P0CF75 366 aa16.87■□□□□ 0.29
VPS13B-201ENST00000355155 PCSK2P16519 638 aa16.87■□□□□ 0.29
VPS13B-201ENST00000355155 ITGAXP20702 1163 aa16.87■□□□□ 0.29
VPS13B-201ENST00000355155 AKT1P31749 480 aa16.87■□□□□ 0.29
VPS13B-201ENST00000355155 TAS2R38P59533 333 aa16.87■□□□□ 0.29
VPS13B-201ENST00000355155 CST6Q15828 149 aa16.87■□□□□ 0.29
VPS13B-201ENST00000355155 NET1Q7Z628 596 aaPredicted RBP16.87■□□□□ 0.29
VPS13B-201ENST00000355155 ADGRG6Q86SQ4 1221 aa16.87■□□□□ 0.29
VPS13B-201ENST00000355155 ENDOVQ8N8Q3 282 aaKnown RBP16.87■□□□□ 0.29
VPS13B-201ENST00000355155 C8orf33Q9H7E9 229 aaPredicted RBP16.87■□□□□ 0.29
VPS13B-201ENST00000355155 TRIM39Q9HCM9 518 aa16.87■□□□□ 0.29
VPS13B-201ENST00000355155 SEMA4BQ9NPR2 832 aaPredicted RBP16.87■□□□□ 0.29
VPS13B-201ENST00000355155 DNMT3AQ9Y6K1 912 aaPredicted RBP16.87■□□□□ 0.29
VPS13B-201ENST00000355155 GLULP15104 373 aa16.87■□□□□ 0.29
VPS13B-201ENST00000355155 GPX3P22352 226 aa16.87■□□□□ 0.29
VPS13B-201ENST00000355155 ZNF33BQ06732 778 aa16.87■□□□□ 0.29
VPS13B-201ENST00000355155 CNTN1Q12860 1018 aa16.87■□□□□ 0.29
VPS13B-201ENST00000355155 CYLC2Q14093 348 aaPredicted RBP16.87■□□□□ 0.29
VPS13B-201ENST00000355155 E2F2Q14209 437 aa16.87■□□□□ 0.29
VPS13B-201ENST00000355155 COQ5Q5HYK3 327 aa16.87■□□□□ 0.29
VPS13B-201ENST00000355155 RALGPS2Q86X27 583 aaPredicted RBP16.87■□□□□ 0.29
VPS13B-201ENST00000355155 OR2T3Q8NH03 318 aa16.87■□□□□ 0.29
VPS13B-201ENST00000355155 ASB12Q8WXK4 309 aa16.87■□□□□ 0.29
VPS13B-201ENST00000355155 CATSPER2Q96P56 530 aa16.87■□□□□ 0.29
VPS13B-201ENST00000355155 BRINP2Q9C0B6 783 aa16.87■□□□□ 0.29
VPS13B-201ENST00000355155 FBRSL1Q9HCM7 1045 aaKnown RBP16.87■□□□□ 0.29
VPS13B-201ENST00000355155 CACNA2D2Q9NY47 1150 aa16.87■□□□□ 0.29
VPS13B-201ENST00000355155 POLG2Q9UHN1 485 aa16.87■□□□□ 0.29
VPS13B-201ENST00000355155 A0A088AWK7 358 aa16.86■□□□□ 0.29
VPS13B-201ENST00000355155 C10orf142B7Z368 130 aa16.86■□□□□ 0.29
VPS13B-201ENST00000355155 GPR89AB7ZAQ6 455 aa16.86■□□□□ 0.29
VPS13B-201ENST00000355155 LIN7AO14910 233 aaPredicted RBP16.86■□□□□ 0.29
VPS13B-201ENST00000355155 SKAP2O75563 359 aaPredicted RBP16.86■□□□□ 0.29
VPS13B-201ENST00000355155 GPR89BP0CG08 455 aa16.86■□□□□ 0.29
VPS13B-201ENST00000355155 TMEM196Q5HYL7 178 aa16.86■□□□□ 0.29
VPS13B-201ENST00000355155 TMEM198Q66K66 360 aa16.86■□□□□ 0.29
VPS13B-201ENST00000355155 C8orf82Q6P1X6 216 aaPredicted RBP16.86■□□□□ 0.29
VPS13B-201ENST00000355155 MMAAQ8IVH4 418 aaKnown RBP16.86■□□□□ 0.29
VPS13B-201ENST00000355155 AADATQ8N5Z0 425 aa16.86■□□□□ 0.29
VPS13B-201ENST00000355155 CXorf40AQ8TE69 158 aa16.86■□□□□ 0.29
VPS13B-201ENST00000355155 SCML1Q9UN30 329 aa16.86■□□□□ 0.29
VPS13B-201ENST00000355155 KLHL33A6NCF5 533 aa16.86■□□□□ 0.29
VPS13B-201ENST00000355155 ALDOCP09972 364 aaKnown RBP16.86■□□□□ 0.29
VPS13B-201ENST00000355155 LBPP18428 481 aa16.86■□□□□ 0.29
VPS13B-201ENST00000355155 CYP2A7P20853 494 aa16.86■□□□□ 0.29
VPS13B-201ENST00000355155 PGM1P36871 562 aa16.86■□□□□ 0.29
VPS13B-201ENST00000355155 RPS14P62263 151 aaKnown RBP16.86■□□□□ 0.29
VPS13B-201ENST00000355155 SNCBQ16143 134 aa16.86■□□□□ 0.29
VPS13B-201ENST00000355155 LETMD1Q6P1Q0 360 aa16.86■□□□□ 0.29
VPS13B-201ENST00000355155 VRK3Q8IV63 474 aa16.86■□□□□ 0.29
VPS13B-201ENST00000355155 TRIM54Q9BYV2 358 aa16.86■□□□□ 0.29
VPS13B-201ENST00000355155 SLC32A1Q9H598 525 aa16.86■□□□□ 0.29
VPS13B-201ENST00000355155 SDR39U1Q9NRG7 319 aaPredicted RBP16.86■□□□□ 0.29
VPS13B-201ENST00000355155 CLDND1Q9NY35 253 aa16.86■□□□□ 0.29
VPS13B-201ENST00000355155 ASIC5Q9NY37 505 aa16.86■□□□□ 0.29
VPS13B-201ENST00000355155 CD207Q9UJ71 328 aa16.86■□□□□ 0.29
VPS13B-201ENST00000355155 CCL27Q9Y4X3 112 aa16.86■□□□□ 0.29
VPS13B-201ENST00000355155 CHEK2O96017 543 aa16.85■□□□□ 0.29
VPS13B-201ENST00000355155 LMNAP02545 664 aaKnown RBP16.85■□□□□ 0.29
VPS13B-201ENST00000355155 TSPAN8P19075 237 aa16.85■□□□□ 0.29
VPS13B-201ENST00000355155 PRDX3P30048 256 aaKnown RBP16.85■□□□□ 0.29
VPS13B-201ENST00000355155 RPIAP49247 311 aa16.85■□□□□ 0.29
VPS13B-201ENST00000355155 ZNF776Q68DI1 518 aaPredicted RBP16.85■□□□□ 0.29
VPS13B-201ENST00000355155 UBE2R2Q712K3 238 aaPredicted RBP16.85■□□□□ 0.29
VPS13B-201ENST00000355155 CSGALNACT1Q8TDX6 532 aa16.85■□□□□ 0.29
VPS13B-201ENST00000355155 WRAP53Q9BUR4 548 aaKnown RBP16.85■□□□□ 0.29
VPS13B-201ENST00000355155 CHUKO15111 745 aa16.85■□□□□ 0.29
VPS13B-201ENST00000355155 RNASEH1O60930 286 aaKnown RBP16.85■□□□□ 0.29
VPS13B-201ENST00000355155 EPORP19235 508 aa16.85■□□□□ 0.29
VPS13B-201ENST00000355155 CTSCP53634 463 aa16.85■□□□□ 0.29
VPS13B-201ENST00000355155 C16orf89Q6UX73 402 aa16.85■□□□□ 0.29
VPS13B-201ENST00000355155 TRIM46Q7Z4K8 759 aa16.85■□□□□ 0.29
VPS13B-201ENST00000355155 SCUBE1Q8IWY4 988 aa16.85■□□□□ 0.29
VPS13B-201ENST00000355155 ZNF513Q8N8E2 541 aaPredicted RBP16.85■□□□□ 0.29
VPS13B-201ENST00000355155 ELMO1Q92556 727 aa16.85■□□□□ 0.29
VPS13B-201ENST00000355155 DENND2DQ9H6A0 471 aaPredicted RBP16.85■□□□□ 0.29
VPS13B-201ENST00000355155 NOL11Q9H8H0 719 aaKnown RBP16.85■□□□□ 0.29
VPS13B-201ENST00000355155 OPTCQ9UBM4 332 aa16.85■□□□□ 0.29
VPS13B-201ENST00000355155 GULP1Q9UBP9 304 aa16.85■□□□□ 0.29
VPS13B-201ENST00000355155 NCF1BA6NI72 391 aaPredicted RBP16.84■□□□□ 0.29
VPS13B-201ENST00000355155 BBIP1A8MTZ0 92 aa16.84■□□□□ 0.29
VPS13B-201ENST00000355155 NCF1CA8MVU1 366 aaPredicted RBP16.84■□□□□ 0.29
VPS13B-201ENST00000355155 UGDHO60701 494 aa16.84■□□□□ 0.29
VPS13B-201ENST00000355155 KATNA1O75449 491 aa16.84■□□□□ 0.29
VPS13B-201ENST00000355155 NCF1P14598 390 aaPredicted RBP16.84■□□□□ 0.29
VPS13B-201ENST00000355155 PRPH2P23942 346 aa16.84■□□□□ 0.29
VPS13B-201ENST00000355155 CCND1P24385 295 aa16.84■□□□□ 0.29
VPS13B-201ENST00000355155 CTHP32929 405 aa16.84■□□□□ 0.29
VPS13B-201ENST00000355155 PDCD4Q53EL6 469 aaKnown RBP16.84■□□□□ 0.29
VPS13B-201ENST00000355155 TRMT11Q7Z4G4 463 aaKnown RBP16.84■□□□□ 0.29
VPS13B-201ENST00000355155 ULK2Q8IYT8 1036 aa16.84■□□□□ 0.29
VPS13B-201ENST00000355155 OXR1Q8N573 874 aa16.84■□□□□ 0.29
VPS13B-201ENST00000355155 L3MBTL4Q8NA19 623 aa16.84■□□□□ 0.29
VPS13B-201ENST00000355155 USP7Q93009 1102 aa16.84■□□□□ 0.29
VPS13B-201ENST00000355155 SLC52A3Q9NQ40 469 aa16.84■□□□□ 0.29
VPS13B-201ENST00000355155 HEBP1Q9NRV9 189 aa16.84■□□□□ 0.29
VPS13B-201ENST00000355155 GPR45Q9Y5Y3 372 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms