RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 SMARCD3Q6STE5 483 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 THAP5Q7Z6K1 395 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 ADGRG6Q86SQ4 1221 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 IQCKQ8N0W5 287 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 PHC3Q8NDX5 983 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 MCFD2Q8NI22 146 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 PIGXQ8TBF5 258 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 TRIM39Q9HCM9 518 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 DTLQ9NZJ0 730 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 RAPGEFL1Q9UHV5 662 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 ING4Q9UNL4 249 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 RGS10O43665 173 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 LCA5LO95447 670 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 IFNA6P05013 189 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 AVPR1BP47901 424 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 DNASE1L1P49184 302 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 ARSIQ5FYB1 569 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 IQCF2Q8IXL9 164 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 FAM13CQ8NE31 585 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 WDR60Q8WVS4 1066 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 CEP295NLQ96MC4 621 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 C1QTNF1Q9BXJ1 281 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 NEUROD4Q9HD90 331 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 A0A0G2JN53 185 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 GNB5O14775 395 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 TCF4P15884 667 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 PRKCHP24723 683 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 CYP2U1Q7Z449 544 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 PGAM4Q8N0Y7 254 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 SMPDL3BQ92485 455 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 NUS1Q96E22 293 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 ZDHHC4Q9NPG8 344 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 DGKBQ9Y6T7 804 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 OR51F1A6NGY5 319 aa13.02□□□□□ -0.32
SCN8A-202ENST00000355133 ADGRB2O60241 1585 aa13.02□□□□□ -0.32
SCN8A-202ENST00000355133 PLIN3O60664 434 aa13.02□□□□□ -0.32
SCN8A-202ENST00000355133 KERAO60938 352 aa13.02□□□□□ -0.32
SCN8A-202ENST00000355133 SYPL2Q5VXT5 272 aa13.02□□□□□ -0.32
SCN8A-202ENST00000355133 OR13C4Q8NGS5 318 aa13.02□□□□□ -0.32
SCN8A-202ENST00000355133 HMGB4Q8WW32 186 aa13.02□□□□□ -0.32
SCN8A-202ENST00000355133 MTERF1Q99551 399 aaKnown RBP13.02□□□□□ -0.32
SCN8A-202ENST00000355133 GATA5Q9BWX5 397 aaPredicted RBP13.02□□□□□ -0.32
SCN8A-202ENST00000355133 FZD8Q9H461 694 aa13.02□□□□□ -0.32
SCN8A-202ENST00000355133 MBD2Q9UBB5 411 aa13.02□□□□□ -0.32
SCN8A-202ENST00000355133 CORO1CQ9ULV4 474 aaPredicted RBP13.02□□□□□ -0.32
SCN8A-202ENST00000355133 CAMTA1Q9Y6Y1 1673 aa13.02□□□□□ -0.32
SCN8A-202ENST00000355133 CHST10O43529 356 aa13.02□□□□□ -0.32
SCN8A-202ENST00000355133 CA12O43570 354 aa13.02□□□□□ -0.32
SCN8A-202ENST00000355133 THRBP10828 461 aa13.02□□□□□ -0.32
SCN8A-202ENST00000355133 DDX6P26196 483 aaKnown RBP eCLIP13.02□□□□□ -0.32
SCN8A-202ENST00000355133 C1QTNF8P60827 252 aa13.02□□□□□ -0.32
SCN8A-202ENST00000355133 OLR1P78380 273 aa13.02□□□□□ -0.32
SCN8A-202ENST00000355133 HEPACAMQ14CZ8 416 aa13.02□□□□□ -0.32
SCN8A-202ENST00000355133 RANBP3LQ86VV4 465 aaPredicted RBP13.02□□□□□ -0.32
SCN8A-202ENST00000355133 A0A075B6Q4 140 aa13.02□□□□□ -0.33
SCN8A-202ENST00000355133 RSL1D1O76021 490 aaKnown RBP13.02□□□□□ -0.33
SCN8A-202ENST00000355133 GJA1P17302 382 aa13.02□□□□□ -0.33
SCN8A-202ENST00000355133 IDH3AP50213 366 aa13.02□□□□□ -0.33
SCN8A-202ENST00000355133 GPM6BQ13491 265 aa13.02□□□□□ -0.33
SCN8A-202ENST00000355133 TMEM63BQ5T3F8 832 aa13.02□□□□□ -0.33
SCN8A-202ENST00000355133 AHSA2Q719I0 299 aa13.02□□□□□ -0.33
SCN8A-202ENST00000355133 DNAJB7Q7Z6W7 309 aaPredicted RBP13.02□□□□□ -0.33
SCN8A-202ENST00000355133 COX18Q8N8Q8 333 aa13.02□□□□□ -0.33
SCN8A-202ENST00000355133 MTMR14Q8NCE2 650 aa13.02□□□□□ -0.33
SCN8A-202ENST00000355133 CHST4Q8NCG5 386 aa13.02□□□□□ -0.33
SCN8A-202ENST00000355133 MARCH7Q9H992 704 aa13.02□□□□□ -0.33
SCN8A-202ENST00000355133 CDH7Q9ULB5 785 aa13.02□□□□□ -0.33
SCN8A-202ENST00000355133 GNEQ9Y223 722 aaKnown RBP13.02□□□□□ -0.33
SCN8A-202ENST00000355133 HOXB6P17509 224 aaKnown RBP13.02□□□□□ -0.33
SCN8A-202ENST00000355133 SYN1P17600 705 aa13.02□□□□□ -0.33
SCN8A-202ENST00000355133 GNALP38405 381 aa13.02□□□□□ -0.33
SCN8A-202ENST00000355133 PITRM1Q5JRX3 1037 aa13.02□□□□□ -0.33
SCN8A-202ENST00000355133 ENPP7Q6UWV6 458 aa13.02□□□□□ -0.33
SCN8A-202ENST00000355133 CLEC20AQ6ZU45 233 aa13.02□□□□□ -0.33
SCN8A-202ENST00000355133 AMZ2Q86W34 360 aa13.02□□□□□ -0.33
SCN8A-202ENST00000355133 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.02□□□□□ -0.33
SCN8A-202ENST00000355133 SLC35G5Q96KT7 338 aa13.02□□□□□ -0.33
SCN8A-202ENST00000355133 KCNS3Q9BQ31 491 aa13.02□□□□□ -0.33
SCN8A-202ENST00000355133 ERVK-11Q9UQG0 969 aa13.02□□□□□ -0.33
SCN8A-202ENST00000355133 PDPK1O15530 556 aa13.01□□□□□ -0.33
SCN8A-202ENST00000355133 WFS1O76024 890 aa13.01□□□□□ -0.33
SCN8A-202ENST00000355133 CCNB2O95067 398 aa13.01□□□□□ -0.33
SCN8A-202ENST00000355133 DBIP07108 87 aaKnown RBP13.01□□□□□ -0.33
SCN8A-202ENST00000355133 ALPPL2P10696 532 aa13.01□□□□□ -0.33
SCN8A-202ENST00000355133 TAS2R39P59534 338 aa13.01□□□□□ -0.33
SCN8A-202ENST00000355133 SMCO1Q147U7 214 aa13.01□□□□□ -0.33
SCN8A-202ENST00000355133 TMEM139Q8IV31 216 aa13.01□□□□□ -0.33
SCN8A-202ENST00000355133 CNTD1Q8N815 330 aa13.01□□□□□ -0.33
SCN8A-202ENST00000355133 LEMD2Q8NC56 503 aa13.01□□□□□ -0.33
SCN8A-202ENST00000355133 SLC22A17Q8WUG5 538 aa13.01□□□□□ -0.33
SCN8A-202ENST00000355133 CYB5D2Q8WUJ1 264 aa13.01□□□□□ -0.33
SCN8A-202ENST00000355133 LRTOMTQ8WZ04 291 aa13.01□□□□□ -0.33
SCN8A-202ENST00000355133 TLR6Q9Y2C9 796 aa13.01□□□□□ -0.33
SCN8A-202ENST00000355133 UGT1A9O60656 530 aa13.01□□□□□ -0.33
SCN8A-202ENST00000355133 ALOX5P09917 674 aa13.01□□□□□ -0.33
SCN8A-202ENST00000355133 ALPIP09923 528 aa13.01□□□□□ -0.33
SCN8A-202ENST00000355133 ZNF8P17098 575 aaPredicted RBP13.01□□□□□ -0.33
SCN8A-202ENST00000355133 UGT1A6P19224 532 aa13.01□□□□□ -0.33
SCN8A-202ENST00000355133 UGT1A1P22309 533 aa13.01□□□□□ -0.33
SCN8A-202ENST00000355133 UGT1A4P22310 534 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms