RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 ADAMTSL2Q86TH1 951 aa19.23■□□□□ 0.67
COL13A1-201ENST00000354547 GPR180Q86V85 440 aa19.23■□□□□ 0.67
COL13A1-201ENST00000354547 SGCDQ92629 289 aa19.23■□□□□ 0.67
COL13A1-201ENST00000354547 FEM1AQ9BSK4 669 aa19.23■□□□□ 0.67
COL13A1-201ENST00000354547 IFT80Q9P2H3 777 aaPredicted RBP19.23■□□□□ 0.67
COL13A1-201ENST00000354547 VPS51Q9UID3 782 aa19.23■□□□□ 0.67
COL13A1-201ENST00000354547 CHD5Q8TDI0 1954 aa19.23■□□□□ 0.67
COL13A1-201ENST00000354547 A0A0J9YVX5 310 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 A0A1W2PPW3 197 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 TRAF3Q13114 568 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 ARHGEF7Q14155 803 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 IMPG1Q17R60 797 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 ARMC12Q5T9G4 340 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 ISG20Q96AZ6 181 aaKnown RBP19.22■□□□□ 0.67
COL13A1-201ENST00000354547 AURKBQ96GD4 344 aaPredicted RBP19.22■□□□□ 0.67
COL13A1-201ENST00000354547 SCLYQ96I15 445 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 TTLL2Q9BWV7 592 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 TNKS2Q9H2K2 1166 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 TLR9Q9NR96 1032 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 GNGT2O14610 69 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 OTCP00480 354 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 ANXA6P08133 673 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 HMGA1P17096 107 aaKnown RBP19.22■□□□□ 0.67
COL13A1-201ENST00000354547 EMP3P54852 163 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 CDH18Q13634 790 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 SPANXN4Q5MJ08 99 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 GOLM1Q8NBJ4 401 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 OR2T12Q8NG77 320 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 NCLNQ969V3 563 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 CDK5RAP1Q96SZ6 601 aaKnown RBP19.22■□□□□ 0.67
COL13A1-201ENST00000354547 MUC13Q9H3R2 512 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 MAGEL2Q9UJ55 1249 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 FRMPD3Q5JV73 1810 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 KCNH1O95259 989 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 GSNP06396 782 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 ZNF7P17097 686 aaPredicted RBP19.22■□□□□ 0.67
COL13A1-201ENST00000354547 POLR2IP36954 125 aaKnown RBP19.22■□□□□ 0.67
COL13A1-201ENST00000354547 TPD52P55327 224 aaPredicted RBP19.22■□□□□ 0.67
COL13A1-201ENST00000354547 GPNMBQ14956 572 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 FAM98BQ52LJ0 330 aaKnown RBP19.22■□□□□ 0.67
COL13A1-201ENST00000354547 LIX1Q8N485 282 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 SKA2Q8WVK7 121 aaPredicted RBP19.22■□□□□ 0.67
COL13A1-201ENST00000354547 MYO19Q96H55 970 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 ZNF583Q96ND8 569 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 ZFYVE1Q9HBF4 777 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 HEBP1Q9NRV9 189 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 PCDHB3Q9Y5E6 796 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 PCDHGA11Q9Y5H2 935 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 TNPO3Q9Y5L0 923 aaKnown RBP19.22■□□□□ 0.67
COL13A1-201ENST00000354547 U3KQV3 271 aa19.22■□□□□ 0.67
COL13A1-201ENST00000354547 CDH1P12830 882 aa19.21■□□□□ 0.67
COL13A1-201ENST00000354547 SELPP16109 830 aa19.21■□□□□ 0.67
COL13A1-201ENST00000354547 SHMT2P34897 504 aa19.21■□□□□ 0.67
COL13A1-201ENST00000354547 HMGCLP35914 325 aa19.21■□□□□ 0.67
COL13A1-201ENST00000354547 TUFMP49411 452 aaKnown RBP19.21■□□□□ 0.67
COL13A1-201ENST00000354547 ALDH7A1P49419 539 aaKnown RBP19.21■□□□□ 0.67
COL13A1-201ENST00000354547 ARSFP54793 590 aa19.21■□□□□ 0.67
COL13A1-201ENST00000354547 PWP1Q13610 501 aa19.21■□□□□ 0.67
COL13A1-201ENST00000354547 CPSF6Q16630 551 aaKnown RBP eCLIP19.21■□□□□ 0.67
COL13A1-201ENST00000354547 MAPKAPK3Q16644 382 aa19.21■□□□□ 0.67
COL13A1-201ENST00000354547 FGD3Q5JSP0 725 aa19.21■□□□□ 0.67
COL13A1-201ENST00000354547 GCNT7Q6ZNI0 430 aa19.21■□□□□ 0.67
COL13A1-201ENST00000354547 ADGRG2Q8IZP9 1017 aa19.21■□□□□ 0.67
COL13A1-201ENST00000354547 APCDD1Q8J025 514 aa19.21■□□□□ 0.67
COL13A1-201ENST00000354547 STK40Q8N2I9 435 aa19.21■□□□□ 0.67
COL13A1-201ENST00000354547 SNRNP27Q8WVK2 155 aaKnown RBP19.21■□□□□ 0.67
COL13A1-201ENST00000354547 PLD4Q96BZ4 506 aa19.21■□□□□ 0.67
COL13A1-201ENST00000354547 ULK4Q96C45 1275 aa19.21■□□□□ 0.67
COL13A1-201ENST00000354547 THAP11Q96EK4 314 aa19.21■□□□□ 0.67
COL13A1-201ENST00000354547 DPY30Q9C005 99 aa19.21■□□□□ 0.67
COL13A1-201ENST00000354547 CD320Q9NPF0 282 aa19.21■□□□□ 0.67
COL13A1-201ENST00000354547 OPTCQ9UBM4 332 aa19.21■□□□□ 0.67
COL13A1-201ENST00000354547 ADGRE2Q9UHX3 823 aa19.21■□□□□ 0.67
COL13A1-201ENST00000354547 ZNF490Q9ULM2 529 aaPredicted RBP19.21■□□□□ 0.67
COL13A1-201ENST00000354547 DEAF1O75398 565 aaPredicted RBP19.21■□□□□ 0.67
COL13A1-201ENST00000354547 IL7RP16871 459 aa19.21■□□□□ 0.67
COL13A1-201ENST00000354547 PRKACGP22612 351 aa19.21■□□□□ 0.67
COL13A1-201ENST00000354547 PCBP2Q15366 365 aaKnown RBP eCLIP19.21■□□□□ 0.67
COL13A1-201ENST00000354547 ANKRD46Q86W74 232 aa19.21■□□□□ 0.67
COL13A1-201ENST00000354547 DRAXINQ8NBI3 349 aaPredicted RBP19.21■□□□□ 0.67
COL13A1-201ENST00000354547 PAPD5Q8NDF8 572 aaKnown RBP19.21■□□□□ 0.67
COL13A1-201ENST00000354547 BPIFB1Q8TDL5 484 aa19.21■□□□□ 0.67
COL13A1-201ENST00000354547 SLC13A3Q8WWT9 602 aa19.21■□□□□ 0.67
COL13A1-201ENST00000354547 ZBTB18Q99592 522 aa19.21■□□□□ 0.67
COL13A1-201ENST00000354547 FAM126AQ9BYI3 521 aaPredicted RBP19.21■□□□□ 0.67
COL13A1-201ENST00000354547 CRLS1Q9UJA2 301 aa19.21■□□□□ 0.67
COL13A1-201ENST00000354547 PIKFYVEQ9Y2I7 2098 aa19.2■□□□□ 0.66
COL13A1-201ENST00000354547 KRT87PA6NCN2 255 aa19.2■□□□□ 0.66
COL13A1-201ENST00000354547 LOC730098B7Z3J9 87 aa19.2■□□□□ 0.66
COL13A1-201ENST00000354547 ANKRD28O15084 1053 aa19.2■□□□□ 0.66
COL13A1-201ENST00000354547 B3GALT4O96024 378 aa19.2■□□□□ 0.66
COL13A1-201ENST00000354547 PIGFQ07326 219 aa19.2■□□□□ 0.66
COL13A1-201ENST00000354547 NKG7Q16617 165 aa19.2■□□□□ 0.66
COL13A1-201ENST00000354547 COMMD8Q9NX08 183 aa19.2■□□□□ 0.66
COL13A1-201ENST00000354547 TUBA8Q9NY65 449 aaPredicted RBP19.2■□□□□ 0.66
COL13A1-201ENST00000354547 PTBP2Q9UKA9 531 aaKnown RBP19.2■□□□□ 0.66
COL13A1-201ENST00000354547 ULK1O75385 1050 aa19.2■□□□□ 0.66
COL13A1-201ENST00000354547 CD247P20963 164 aa19.2■□□□□ 0.66
COL13A1-201ENST00000354547 ELAVL2Q12926 359 aaKnown RBP19.2■□□□□ 0.66
COL13A1-201ENST00000354547 KLHL35Q6PF15 583 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms