RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 CACNA1BQ00975 2339 aa21.56■■□□□ 1.04
SNX3-202ENST00000349379 NDUFS3O75489 264 aa21.55■■□□□ 1.04
SNX3-202ENST00000349379 TNFSF15O95150 251 aa21.55■■□□□ 1.04
SNX3-202ENST00000349379 ANKRD34CP0C6C1 535 aa21.55■■□□□ 1.04
SNX3-202ENST00000349379 ACADLP28330 430 aa21.55■■□□□ 1.04
SNX3-202ENST00000349379 NDUFS1P28331 727 aa21.55■■□□□ 1.04
SNX3-202ENST00000349379 RBMS1P29558 406 aaKnown RBP21.55■■□□□ 1.04
SNX3-202ENST00000349379 CCR7P32248 378 aa21.55■■□□□ 1.04
SNX3-202ENST00000349379 ETV5P41161 510 aa21.55■■□□□ 1.04
SNX3-202ENST00000349379 ADARP55265 1226 aaKnown RBP21.55■■□□□ 1.04
SNX3-202ENST00000349379 GFERP55789 205 aa21.55■■□□□ 1.04
SNX3-202ENST00000349379 PLOD1Q02809 727 aaPredicted RBP21.55■■□□□ 1.04
SNX3-202ENST00000349379 DHX9Q08211 1270 aaKnown RBP21.55■■□□□ 1.04
SNX3-202ENST00000349379 RNF187Q5TA31 235 aaPredicted RBP21.55■■□□□ 1.04
SNX3-202ENST00000349379 NEPROQ6NW34 567 aa21.55■■□□□ 1.04
SNX3-202ENST00000349379 ZNF449Q6P9G9 518 aa21.55■■□□□ 1.04
SNX3-202ENST00000349379 CENPUQ71F23 418 aa21.55■■□□□ 1.04
SNX3-202ENST00000349379 CILP2Q8IUL8 1156 aa21.55■■□□□ 1.04
SNX3-202ENST00000349379 SNF8Q96H20 258 aa21.55■■□□□ 1.04
SNX3-202ENST00000349379 IL1RAPL1Q9NZN1 696 aa21.55■■□□□ 1.04
SNX3-202ENST00000349379 CDYLQ9Y232 598 aa21.55■■□□□ 1.04
SNX3-202ENST00000349379 PCDHGA7Q9Y5G6 932 aa21.55■■□□□ 1.04
SNX3-202ENST00000349379 MAD1L1Q9Y6D9 718 aa21.55■■□□□ 1.04
SNX3-202ENST00000349379 FAM169AQ9Y6X4 670 aa21.55■■□□□ 1.04
SNX3-202ENST00000349379 COLEC10Q9Y6Z7 277 aa21.55■■□□□ 1.04
SNX3-202ENST00000349379 SDK2Q58EX2 2172 aa21.54■■□□□ 1.04
SNX3-202ENST00000349379 FAM187AA6NFU0 413 aa21.54■■□□□ 1.04
SNX3-202ENST00000349379 IQCF5A8MTL0 148 aa21.54■■□□□ 1.04
SNX3-202ENST00000349379 BHMG1C9JSJ3 638 aaPredicted RBP21.54■■□□□ 1.04
SNX3-202ENST00000349379 IFRD1O00458 451 aaPredicted RBP21.54■■□□□ 1.04
SNX3-202ENST00000349379 GPC4O75487 556 aa21.54■■□□□ 1.04
SNX3-202ENST00000349379 JMJD7P0C870 316 aa21.54■■□□□ 1.04
SNX3-202ENST00000349379 AMD1P17707 334 aa21.54■■□□□ 1.04
SNX3-202ENST00000349379 PGAM1P18669 254 aa21.54■■□□□ 1.04
SNX3-202ENST00000349379 ITIH1P19827 911 aa21.54■■□□□ 1.04
SNX3-202ENST00000349379 RPL21P46778 160 aaKnown RBP21.54■■□□□ 1.04
SNX3-202ENST00000349379 ITGA8P53708 1063 aa21.54■■□□□ 1.04
SNX3-202ENST00000349379 C2orf54Q08AI8 447 aa21.54■■□□□ 1.04
SNX3-202ENST00000349379 BOP1Q14137 746 aaKnown RBP21.54■■□□□ 1.04
SNX3-202ENST00000349379 CTSL3PQ5NE16 218 aa21.54■■□□□ 1.04
SNX3-202ENST00000349379 FOXR1Q6PIV2 292 aa21.54■■□□□ 1.04
SNX3-202ENST00000349379 SDCCAG8Q86SQ7 713 aaPredicted RBP21.54■■□□□ 1.04
SNX3-202ENST00000349379 AGBL5Q8NDL9 886 aa21.54■■□□□ 1.04
SNX3-202ENST00000349379 BIRC8Q96P09 236 aa21.54■■□□□ 1.04
SNX3-202ENST00000349379 EBNA1BP2Q99848 306 aaKnown RBP21.54■■□□□ 1.04
SNX3-202ENST00000349379 TSSK1BQ9BXA7 367 aa21.54■■□□□ 1.04
SNX3-202ENST00000349379 ZMYND15Q9H091 742 aa21.54■■□□□ 1.04
SNX3-202ENST00000349379 MVB12BQ9H7P6 319 aa21.54■■□□□ 1.04
SNX3-202ENST00000349379 AKAP7Q9P0M2 348 aaPredicted RBP21.54■■□□□ 1.04
SNX3-202ENST00000349379 PISDQ9UG56 409 aa21.54■■□□□ 1.04
SNX3-202ENST00000349379 GNPTGQ9UJJ9 305 aa21.54■■□□□ 1.04
SNX3-202ENST00000349379 SNRNP200O75643 2136 aaKnown RBP21.53■■□□□ 1.04
SNX3-202ENST00000349379 AHCTF1Q8WYP5 2266 aa21.53■■□□□ 1.04
SNX3-202ENST00000349379 A0A087WV48 116 aa21.53■■□□□ 1.04
SNX3-202ENST00000349379 EFCAB8A8MWE9 144 aa21.53■■□□□ 1.04
SNX3-202ENST00000349379 CAPN5O15484 640 aaPredicted RBP21.53■■□□□ 1.04
SNX3-202ENST00000349379 BANF1O75531 89 aa21.53■■□□□ 1.04
SNX3-202ENST00000349379 CCL4P13236 92 aa21.53■■□□□ 1.04
SNX3-202ENST00000349379 ITGB6P18564 788 aa21.53■■□□□ 1.04
SNX3-202ENST00000349379 AOAHP28039 575 aa21.53■■□□□ 1.04
SNX3-202ENST00000349379 EIF2S3P41091 472 aaKnown RBP21.53■■□□□ 1.04
SNX3-202ENST00000349379 PPM1FP49593 454 aaPredicted RBP21.53■■□□□ 1.04
SNX3-202ENST00000349379 CBLBQ13191 982 aa21.53■■□□□ 1.04
SNX3-202ENST00000349379 LONRF1Q17RB8 773 aa21.53■■□□□ 1.04
SNX3-202ENST00000349379 DNAJC21Q5F1R6 531 aaKnown RBP21.53■■□□□ 1.04
SNX3-202ENST00000349379 NAPRTQ6XQN6 538 aa21.53■■□□□ 1.04
SNX3-202ENST00000349379 LMNTD2Q8IXW0 634 aa21.53■■□□□ 1.04
SNX3-202ENST00000349379 KRT222Q8N1A0 295 aa21.53■■□□□ 1.04
SNX3-202ENST00000349379 OTUD6BQ8N6M0 293 aa21.53■■□□□ 1.04
SNX3-202ENST00000349379 ACVR1CQ8NER5 493 aa21.53■■□□□ 1.04
SNX3-202ENST00000349379 JPH3Q8WXH2 748 aaPredicted RBP21.53■■□□□ 1.04
SNX3-202ENST00000349379 TFGQ92734 400 aaPredicted RBP21.53■■□□□ 1.04
SNX3-202ENST00000349379 C9orf72Q96LT7 481 aa21.53■■□□□ 1.04
SNX3-202ENST00000349379 PANX3Q96QZ0 392 aa21.53■■□□□ 1.04
SNX3-202ENST00000349379 NAT9Q9BTE0 207 aa21.53■■□□□ 1.04
SNX3-202ENST00000349379 B3GNT4Q9C0J1 378 aa21.53■■□□□ 1.04
SNX3-202ENST00000349379 PLAC1Q9HBJ0 212 aa21.53■■□□□ 1.04
SNX3-202ENST00000349379 INTS10Q9NVR2 710 aaKnown RBP21.53■■□□□ 1.04
SNX3-202ENST00000349379 SEMA5BQ9P283 1151 aa21.53■■□□□ 1.04
SNX3-202ENST00000349379 CDC23Q9UJX2 597 aa21.53■■□□□ 1.04
SNX3-202ENST00000349379 ACSL6Q9UKU0 697 aa21.53■■□□□ 1.04
SNX3-202ENST00000349379 ZFHX4Q86UP3 3567 aa21.52■■□□□ 1.04
SNX3-202ENST00000349379 TOX3O15405 576 aaPredicted RBP21.52■■□□□ 1.04
SNX3-202ENST00000349379 RAD51CO43502 376 aa21.52■■□□□ 1.04
SNX3-202ENST00000349379 S1PR4O95977 384 aa21.52■■□□□ 1.04
SNX3-202ENST00000349379 FGF3P11487 239 aaPredicted RBP21.52■■□□□ 1.04
SNX3-202ENST00000349379 LEPRP48357 1165 aaKnown RBP21.52■■□□□ 1.04
SNX3-202ENST00000349379 EIF3BP55884 814 aaKnown RBP21.52■■□□□ 1.04
SNX3-202ENST00000349379 PCBP4P57723 403 aaKnown RBP21.52■■□□□ 1.04
SNX3-202ENST00000349379 CRYMQ14894 314 aa21.52■■□□□ 1.04
SNX3-202ENST00000349379 PLCL1Q15111 1095 aa21.52■■□□□ 1.04
SNX3-202ENST00000349379 ZNF470Q6ECI4 717 aa21.52■■□□□ 1.04
SNX3-202ENST00000349379 KLHL35Q6PF15 583 aa21.52■■□□□ 1.04
SNX3-202ENST00000349379 MAATS1Q7Z4T9 603 aa21.52■■□□□ 1.04
SNX3-202ENST00000349379 IGDCC3Q8IVU1 814 aa21.52■■□□□ 1.04
SNX3-202ENST00000349379 SLC22A15Q8IZD6 547 aa21.52■■□□□ 1.04
SNX3-202ENST00000349379 PDIK1LQ8N165 341 aa21.52■■□□□ 1.04
SNX3-202ENST00000349379 BMPERQ8N8U9 685 aa21.52■■□□□ 1.04
SNX3-202ENST00000349379 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.52■■□□□ 1.04
SNX3-202ENST00000349379 PWWP2AQ96N64 755 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms