RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 TRAM1L1Q8N609 369 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 C1orf54Q8WWF1 131 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 HIC2Q96JB3 615 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 PBKQ96KB5 322 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 ZSCAN5AQ9BUG6 496 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 SOX17Q9H6I2 414 aaPredicted RBP10.14□□□□□ -0.79
TPM3-207ENST00000341372 IL17CQ9P0M4 197 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 VPS18Q9P253 973 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 IFT80Q9P2H3 777 aaPredicted RBP10.14□□□□□ -0.79
TPM3-207ENST00000341372 DRG1Q9Y295 367 aaKnown RBP10.14□□□□□ -0.79
TPM3-207ENST00000341372 PLXNB3Q9ULL4 1909 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 CES2O00748 559 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 CEP104O60308 925 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 PPFIA2O75334 1257 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 AP2A1O95782 977 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 AGTP01019 485 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 FUCA1P04066 466 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 ATP1A1P05023 1023 aaKnown RBP10.14□□□□□ -0.79
TPM3-207ENST00000341372 CELA2BP08218 269 aaPredicted RBP10.14□□□□□ -0.79
TPM3-207ENST00000341372 CKMT1AP12532 417 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 CXCR5P32302 372 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 GPR85P60893 370 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 OLIG2Q13516 323 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 ELOCQ15369 112 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 ZBTB37Q5TC79 503 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 ZDHHC20Q5W0Z9 365 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 GLT6D1Q7Z4J2 308 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 APOLD1Q96LR9 279 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 TBL1YQ9BQ87 522 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 LRRC40Q9H9A6 602 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 MRPL40Q9NQ50 206 aaKnown RBP10.14□□□□□ -0.79
TPM3-207ENST00000341372 TRNAU1APQ9NX07 287 aaKnown RBP10.14□□□□□ -0.79
TPM3-207ENST00000341372 NCKIPSDQ9NZQ3 722 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 TUBD1Q9UJT1 453 aa10.14□□□□□ -0.79
TPM3-207ENST00000341372 COL27A1Q8IZC6 1860 aaPredicted RBP10.13□□□□□ -0.79
TPM3-207ENST00000341372 ERI2A8K979 691 aaKnown RBP10.13□□□□□ -0.79
TPM3-207ENST00000341372 PSMD3O43242 534 aa10.13□□□□□ -0.79
TPM3-207ENST00000341372 SLU7O95391 586 aaKnown RBP10.13□□□□□ -0.79
TPM3-207ENST00000341372 CDK4P11802 303 aa10.13□□□□□ -0.79
TPM3-207ENST00000341372 FDFT1P37268 417 aa10.13□□□□□ -0.79
TPM3-207ENST00000341372 DNAJC3Q13217 504 aa10.13□□□□□ -0.79
TPM3-207ENST00000341372 C1orf61Q13536 156 aa10.13□□□□□ -0.79
TPM3-207ENST00000341372 TAF1AQ15573 450 aaPredicted RBP10.13□□□□□ -0.79
TPM3-207ENST00000341372 PAPD7Q5XG87 772 aaKnown RBP10.13□□□□□ -0.79
TPM3-207ENST00000341372 CISD2Q8N5K1 135 aaKnown RBP10.13□□□□□ -0.79
TPM3-207ENST00000341372 PRELID2Q8N945 189 aa10.13□□□□□ -0.79
TPM3-207ENST00000341372 BLOC1S5Q8TDH9 187 aa10.13□□□□□ -0.79
TPM3-207ENST00000341372 LRRC45Q96CN5 670 aa10.13□□□□□ -0.79
TPM3-207ENST00000341372 C1GALT1C1Q96EU7 318 aa10.13□□□□□ -0.79
TPM3-207ENST00000341372 ABHD17AQ96GS6 310 aa10.13□□□□□ -0.79
TPM3-207ENST00000341372 VPS35Q96QK1 796 aa10.13□□□□□ -0.79
TPM3-207ENST00000341372 CARD6Q9BX69 1037 aa10.13□□□□□ -0.79
TPM3-207ENST00000341372 HOMER3Q9NSC5 361 aa10.13□□□□□ -0.79
TPM3-207ENST00000341372 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.13□□□□□ -0.792e-8■■□□□ 11.4
TPM3-207ENST00000341372 SUFUQ9UMX1 484 aa10.13□□□□□ -0.79
TPM3-207ENST00000341372 CORO2BQ9UQ03 480 aa10.13□□□□□ -0.79
TPM3-207ENST00000341372 ZNF148Q9UQR1 794 aa10.13□□□□□ -0.79
TPM3-207ENST00000341372 OAS3Q9Y6K5 1087 aaKnown RBP10.13□□□□□ -0.79
TPM3-207ENST00000341372 ASXL3Q9C0F0 2248 aa10.13□□□□□ -0.79
TPM3-207ENST00000341372 CHD8Q9HCK8 2581 aa10.13□□□□□ -0.79
TPM3-207ENST00000341372 GAPDHSO14556 408 aaPredicted RBP10.12□□□□□ -0.79
TPM3-207ENST00000341372 DYNC1I1O14576 645 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 YY2O15391 372 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 SUN1O94901 812 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 ANXA6P08133 673 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 OSMP13725 252 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 CTSEP14091 401 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 CYP1B1Q16678 543 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 DEFB133Q30KQ1 61 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 FAM209BQ5JX69 171 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 IZUMO3Q5VZ72 239 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 GALNT5Q7Z7M9 940 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 TRIM74Q86UV6 250 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 GKN2Q86XP6 184 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 PPIL6Q8IXY8 311 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 GLIS1Q8NBF1 620 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 BRSK1Q8TDC3 778 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 HPS1Q92902 700 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 OSBPL9Q96SU4 736 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 BARD1Q99728 777 aaKnown RBP10.12□□□□□ -0.79
TPM3-207ENST00000341372 NAPGQ99747 312 aaPredicted RBP10.12□□□□□ -0.79
TPM3-207ENST00000341372 APOL2Q9BQE5 337 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 TMEM168Q9H0V1 697 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 CARS2Q9HA77 564 aaKnown RBP10.12□□□□□ -0.79
TPM3-207ENST00000341372 CYP4F12Q9HCS2 524 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 SMOXQ9NWM0 555 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 PAK5Q9P286 719 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 SNX12Q9UMY4 172 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 V9GYY5 206 aaPredicted RBP10.12□□□□□ -0.79
TPM3-207ENST00000341372 TPRP12270 2363 aaKnown RBP10.12□□□□□ -0.79
TPM3-207ENST00000341372 ACACBO00763 2458 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 CTAGE9A4FU28 777 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 GPR89AB7ZAQ6 455 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 EIF3FO00303 357 aaPredicted RBP10.12□□□□□ -0.79
TPM3-207ENST00000341372 INPP4BO15327 924 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 TMCC2O75069 709 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 USP12O75317 370 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 SLC4A1P02730 911 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 GP1BAP07359 652 aa10.12□□□□□ -0.79
TPM3-207ENST00000341372 GPR89BP0CG08 455 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms