RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 CCM2Q9BSQ5 444 aa16.61■□□□□ 0.25
BRCC3-202ENST00000340647 LZTFL1Q9NQ48 299 aa16.61■□□□□ 0.25
BRCC3-202ENST00000340647 HRASLS2Q9NWW9 162 aa16.61■□□□□ 0.25
BRCC3-202ENST00000340647 NAV2Q8IVL1 2488 aa16.6■□□□□ 0.25
BRCC3-202ENST00000340647 HECTD1Q9ULT8 2610 aa16.6■□□□□ 0.25
BRCC3-202ENST00000340647 KLHL33A6NCF5 533 aa16.6■□□□□ 0.25
BRCC3-202ENST00000340647 B8ZZF3 427 aa16.6■□□□□ 0.25
BRCC3-202ENST00000340647 SPAG6O75602 509 aa16.6■□□□□ 0.25
BRCC3-202ENST00000340647 IFNB1P01574 187 aa16.6■□□□□ 0.25
BRCC3-202ENST00000340647 PTMAP06454 111 aaKnown RBP16.6■□□□□ 0.25
BRCC3-202ENST00000340647 EBLN1P0CF75 366 aa16.6■□□□□ 0.25
BRCC3-202ENST00000340647 MSNP26038 577 aaKnown RBP16.6■□□□□ 0.25
BRCC3-202ENST00000340647 PREPP48147 710 aa16.6■□□□□ 0.25
BRCC3-202ENST00000340647 IL11RAQ14626 422 aa16.6■□□□□ 0.25
BRCC3-202ENST00000340647 RPS6KA1Q15418 735 aa16.6■□□□□ 0.25
BRCC3-202ENST00000340647 ATP1A1-AS1Q5TC04 95 aa16.6■□□□□ 0.25
BRCC3-202ENST00000340647 SEL1L2Q5TEA6 688 aa16.6■□□□□ 0.25
BRCC3-202ENST00000340647 NAPRTQ6XQN6 538 aa16.6■□□□□ 0.25
BRCC3-202ENST00000340647 GALNT6Q8NCL4 622 aa16.6■□□□□ 0.25
BRCC3-202ENST00000340647 PHC3Q8NDX5 983 aa16.6■□□□□ 0.25
BRCC3-202ENST00000340647 RANBP9Q96S59 729 aa16.6■□□□□ 0.25
BRCC3-202ENST00000340647 FRMD8P1Q9BZ68 369 aaPredicted RBP16.6■□□□□ 0.25
BRCC3-202ENST00000340647 TWSG1Q9GZX9 223 aa16.6■□□□□ 0.25
BRCC3-202ENST00000340647 STARD5Q9NSY2 213 aa16.6■□□□□ 0.25
BRCC3-202ENST00000340647 MED13Q9UHV7 2174 aa16.6■□□□□ 0.25
BRCC3-202ENST00000340647 OR6C74A6NCV1 312 aa16.59■□□□□ 0.25
BRCC3-202ENST00000340647 ERI2A8K979 691 aaKnown RBP16.59■□□□□ 0.25
BRCC3-202ENST00000340647 BTN3A3O00478 584 aa16.59■□□□□ 0.25
BRCC3-202ENST00000340647 OR1I1O60431 355 aa16.59■□□□□ 0.25
BRCC3-202ENST00000340647 KIAA0754O94854 1291 aa16.59■□□□□ 0.25
BRCC3-202ENST00000340647 FURINP09958 794 aa16.59■□□□□ 0.25
BRCC3-202ENST00000340647 SLC35G4P0C7Q5 338 aa16.59■□□□□ 0.25
BRCC3-202ENST00000340647 ACADLP28330 430 aa16.59■□□□□ 0.25
BRCC3-202ENST00000340647 OAS2P29728 719 aaKnown RBP16.59■□□□□ 0.25
BRCC3-202ENST00000340647 FDFT1P37268 417 aa16.59■□□□□ 0.25
BRCC3-202ENST00000340647 CDH17Q12864 832 aa16.59■□□□□ 0.25
BRCC3-202ENST00000340647 PLCL1Q15111 1095 aa16.59■□□□□ 0.25
BRCC3-202ENST00000340647 CCNG2Q16589 344 aa16.59■□□□□ 0.25
BRCC3-202ENST00000340647 TSTD2Q5T7W7 516 aa16.59■□□□□ 0.25
BRCC3-202ENST00000340647 PWWP2BQ6NUJ5 590 aa16.59■□□□□ 0.25
BRCC3-202ENST00000340647 DRICH1Q6PGQ1 229 aaPredicted RBP16.59■□□□□ 0.25
BRCC3-202ENST00000340647 TAS2R42Q7RTR8 314 aa16.59■□□□□ 0.25
BRCC3-202ENST00000340647 LINC00523Q86TU6 105 aa16.59■□□□□ 0.25
BRCC3-202ENST00000340647 D2HGDHQ8N465 521 aa16.59■□□□□ 0.25
BRCC3-202ENST00000340647 OR4E2Q8NGC2 313 aa16.59■□□□□ 0.25
BRCC3-202ENST00000340647 HEXDCQ8WVB3 486 aa16.59■□□□□ 0.25
BRCC3-202ENST00000340647 UBXN4Q92575 508 aa16.59■□□□□ 0.25
BRCC3-202ENST00000340647 HDAC10Q969S8 669 aa16.59■□□□□ 0.25
BRCC3-202ENST00000340647 ULBP3Q9BZM4 244 aa16.59■□□□□ 0.25
BRCC3-202ENST00000340647 RAB6BQ9NRW1 208 aa16.59■□□□□ 0.25
BRCC3-202ENST00000340647 ZNF148Q9UQR1 794 aa16.59■□□□□ 0.25
BRCC3-202ENST00000340647 COL12A1Q99715 3063 aa16.59■□□□□ 0.25
BRCC3-202ENST00000340647 TLCD2A6NGC4 264 aa16.58■□□□□ 0.24
BRCC3-202ENST00000340647 BHMG1C9JSJ3 638 aaPredicted RBP16.58■□□□□ 0.24
BRCC3-202ENST00000340647 GOT2P00505 430 aaKnown RBP16.58■□□□□ 0.24
BRCC3-202ENST00000340647 RALBP11234 206 aa16.58■□□□□ 0.24
BRCC3-202ENST00000340647 POLR2CP19387 275 aaPredicted RBP16.58■□□□□ 0.24
BRCC3-202ENST00000340647 KCNJ1P48048 391 aa16.58■□□□□ 0.24
BRCC3-202ENST00000340647 LAMB3Q13751 1172 aa16.58■□□□□ 0.24
BRCC3-202ENST00000340647 BOP1Q14137 746 aaKnown RBP16.58■□□□□ 0.24
BRCC3-202ENST00000340647 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.58■□□□□ 0.24
BRCC3-202ENST00000340647 PACS1Q6VY07 963 aa16.58■□□□□ 0.24
BRCC3-202ENST00000340647 ZSCAN1Q8NBB4 408 aa16.58■□□□□ 0.24
BRCC3-202ENST00000340647 SLC38A9Q8NBW4 561 aa16.58■□□□□ 0.24
BRCC3-202ENST00000340647 UBE2Q2Q8WVN8 375 aa16.58■□□□□ 0.24
BRCC3-202ENST00000340647 RUFY1Q96T51 708 aa16.58■□□□□ 0.24
BRCC3-202ENST00000340647 GPN2Q9H9Y4 310 aaPredicted RBP16.58■□□□□ 0.24
BRCC3-202ENST00000340647 SMARCAL1Q9NZC9 954 aa16.58■□□□□ 0.24
BRCC3-202ENST00000340647 RIMKLBQ9ULI2 386 aa16.58■□□□□ 0.24
BRCC3-202ENST00000340647 DRG1Q9Y295 367 aaKnown RBP16.58■□□□□ 0.24
BRCC3-202ENST00000340647 RPS6KL1Q9Y6S9 549 aa16.58■□□□□ 0.24
BRCC3-202ENST00000340647 PCSK5Q92824 1860 aa16.58■□□□□ 0.24
BRCC3-202ENST00000340647 SLC5A10A0PJK1 596 aa16.57■□□□□ 0.24
BRCC3-202ENST00000340647 CFAP99D6REC4 459 aa16.57■□□□□ 0.24
BRCC3-202ENST00000340647 AP2A2O94973 939 aa16.57■□□□□ 0.24
BRCC3-202ENST00000340647 ADRA1DP25100 572 aa16.57■□□□□ 0.24
BRCC3-202ENST00000340647 CD151P48509 253 aa16.57■□□□□ 0.24
BRCC3-202ENST00000340647 NFKB2Q00653 900 aa16.57■□□□□ 0.24
BRCC3-202ENST00000340647 ITIH4Q14624 930 aa16.57■□□□□ 0.24
BRCC3-202ENST00000340647 SKIDA1Q1XH10 827 aa16.57■□□□□ 0.24
BRCC3-202ENST00000340647 ZNF789Q5FWF6 425 aa16.57■□□□□ 0.24
BRCC3-202ENST00000340647 DNTTIP2Q5QJE6 756 aaKnown RBP16.57■□□□□ 0.24
BRCC3-202ENST00000340647 PRAMEF17Q5VTA0 474 aa16.57■□□□□ 0.24
BRCC3-202ENST00000340647 C6orf15Q6UXA7 325 aaPredicted RBP16.57■□□□□ 0.24
BRCC3-202ENST00000340647 ADGRF3Q8IZF5 1079 aa16.57■□□□□ 0.24
BRCC3-202ENST00000340647 ESX1Q8N693 406 aa16.57■□□□□ 0.24
BRCC3-202ENST00000340647 ACVR1CQ8NER5 493 aa16.57■□□□□ 0.24
BRCC3-202ENST00000340647 OR52E1Q8NGJ3 308 aa16.57■□□□□ 0.24
BRCC3-202ENST00000340647 FLVCR1-AS1Q8TAF5 88 aa16.57■□□□□ 0.24
BRCC3-202ENST00000340647 LKAAEAR1Q8TD35 194 aa16.57■□□□□ 0.24
BRCC3-202ENST00000340647 ZNF501Q96CX3 271 aaPredicted RBP16.57■□□□□ 0.24
BRCC3-202ENST00000340647 FERD3LQ96RJ6 166 aa16.57■□□□□ 0.24
BRCC3-202ENST00000340647 CD180Q99467 661 aa16.57■□□□□ 0.24
BRCC3-202ENST00000340647 TRIT1Q9H3H1 467 aaKnown RBP16.57■□□□□ 0.24
BRCC3-202ENST00000340647 TFB2MQ9H5Q4 396 aaKnown RBP16.57■□□□□ 0.24
BRCC3-202ENST00000340647 MARCH4Q9P2E8 410 aaPredicted RBP16.57■□□□□ 0.24
BRCC3-202ENST00000340647 CROTQ9UKG9 612 aa16.57■□□□□ 0.24
BRCC3-202ENST00000340647 POMT2Q9UKY4 750 aa16.57■□□□□ 0.24
BRCC3-202ENST00000340647 CDYLQ9Y232 598 aa16.57■□□□□ 0.24
BRCC3-202ENST00000340647 BTRCQ9Y297 605 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms