RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 LNX2Q8N448 690 aa8.58□□□□□ -1.04
RTN3-202ENST00000339997 AURKBQ96GD4 344 aaPredicted RBP8.58□□□□□ -1.04
RTN3-202ENST00000339997 PCED1BQ96HM7 432 aa8.58□□□□□ -1.04
RTN3-202ENST00000339997 TRMOQ9BU70 441 aa8.58□□□□□ -1.04
RTN3-202ENST00000339997 LHX5Q9H2C1 402 aa8.58□□□□□ -1.04
RTN3-202ENST00000339997 IGFLR1Q9H665 355 aa8.58□□□□□ -1.04
RTN3-202ENST00000339997 C8orf4Q9NR00 106 aa8.58□□□□□ -1.04
RTN3-202ENST00000339997 RGS17Q9UGC6 210 aaPredicted RBP8.58□□□□□ -1.04
RTN3-202ENST00000339997 ARVCFO00192 962 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 AURKAO14965 403 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 MID1O15344 667 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 UGT2B17O75795 530 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 CDK14O94921 469 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 PRAMEF1O95521 474 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 ITGA2P17301 1181 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 RPL17P18621 184 aaKnown RBP8.57□□□□□ -1.04
RTN3-202ENST00000339997 FECHP22830 423 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 RPS12P25398 132 aaKnown RBP8.57□□□□□ -1.04
RTN3-202ENST00000339997 DCDC1P59894 354 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 ARPC4P59998 168 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 ENPEPQ07075 957 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 FCHO2Q0JRZ9 810 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 CATSPERGQ6ZRH7 1159 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 PEG10Q86TG7 708 aaKnown RBP8.57□□□□□ -1.04
RTN3-202ENST00000339997 TAC4Q86UU9 113 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 FAM124AQ86V42 546 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 CENPSQ8N2Z9 138 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 LRRC20Q8TCA0 184 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 HMCESQ96FZ2 354 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 TTTY10Q9BZA0 68 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 DCSTAMPQ9H295 470 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 C12orf4Q9NQ89 552 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 NANSQ9NR45 359 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 TMEM59LQ9UK28 342 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 ITGB1BP2Q9UKP3 347 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 PCDHGA10Q9Y5H3 936 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 PTGDR2Q9Y5Y4 395 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 NOTOA8MTQ0 251 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 ZNF99A8MXY4 864 aaPredicted RBP8.57□□□□□ -1.04
RTN3-202ENST00000339997 PPEF2O14830 753 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 ECDO95905 644 aaPredicted RBP8.57□□□□□ -1.04
RTN3-202ENST00000339997 AHSGP02765 367 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 PLA2G16P53816 162 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 CAMK1Q14012 370 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 TGFBIQ15582 683 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 TIGD6Q17RP2 521 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 ATXN7L2Q5T6C5 722 aaPredicted RBP8.57□□□□□ -1.04
RTN3-202ENST00000339997 IKBIPQ70UQ0 350 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 ZNF438Q7Z4V0 828 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 SMG8Q8ND04 991 aaKnown RBP8.57□□□□□ -1.04
RTN3-202ENST00000339997 RAB2BQ8WUD1 216 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 NSMCE3Q96MG7 304 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 MIPEPQ99797 713 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 DMAC2Q9NW81 257 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 TUBA8Q9NY65 449 aaPredicted RBP8.57□□□□□ -1.04
RTN3-202ENST00000339997 AKAP7Q9P0M2 348 aaPredicted RBP8.57□□□□□ -1.04
RTN3-202ENST00000339997 FCF1Q9Y324 198 aaKnown RBP8.57□□□□□ -1.04
RTN3-202ENST00000339997 GPSM3Q9Y4H4 160 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 TLL2Q9Y6L7 1015 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 COL18A1P39060 1754 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 CEP290O15078 2479 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 TREHO43280 583 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 UGT2B11O75310 529 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 DLDP09622 509 aaKnown RBP8.57□□□□□ -1.04
RTN3-202ENST00000339997 HOXB8P17481 243 aaPredicted RBP8.57□□□□□ -1.04
RTN3-202ENST00000339997 ITPKBP27987 946 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 STAT5AP42229 794 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 ALDH3A2P51648 485 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 DEFA5Q01523 94 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 TAF13Q15543 124 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 CYP1B1Q16678 543 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 HKDC1Q2TB90 917 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 ATP13A5Q4VNC0 1218 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 IDNKQ5T6J7 187 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 KIAA1161Q6NSJ0 714 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 STRADAQ7RTN6 431 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 ATP6V1C2Q8NEY4 427 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 PKP4Q99569 1192 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 CCDC28BQ9BUN5 200 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 C14orf119Q9NWQ9 140 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 FAM53CQ9NYF3 392 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 TCAF1Q9Y4C2 921 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 E9PAM4 449 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 SOX14O95416 240 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 FGF1P05230 155 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 FGRP09769 529 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 POLR2EP19388 210 aaKnown RBP8.57□□□□□ -1.04
RTN3-202ENST00000339997 MAZP56270 477 aaKnown RBP8.57□□□□□ -1.04
RTN3-202ENST00000339997 UFM1P61960 85 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 PURAQ00577 322 aaKnown RBP8.57□□□□□ -1.04
RTN3-202ENST00000339997 E2F2Q14209 437 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 SLC10A6Q3KNW5 377 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 HLA-DQA1Q5Y7H0 255 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 HFE2Q6ZVN8 426 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 LAPTM4BQ86VI4 370 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 RIOX2Q8IUF8 465 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 ERI1Q8IV48 349 aaKnown RBP8.57□□□□□ -1.04
RTN3-202ENST00000339997 TMEM130Q8N3G9 435 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 ZSCAN5AQ9BUG6 496 aa8.57□□□□□ -1.04
RTN3-202ENST00000339997 RHCGQ9UBD6 479 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms