RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 MAP10Q9P2G4 905 aa7.26□□□□□ -1.25
SRFBP1-201ENST00000339397 CNOT6Q9ULM6 557 aaKnown RBP7.26□□□□□ -1.25
SRFBP1-201ENST00000339397 OARD1Q9Y530 152 aa7.26□□□□□ -1.25
SRFBP1-201ENST00000339397 PCDHGA7Q9Y5G6 932 aa7.26□□□□□ -1.25
SRFBP1-201ENST00000339397 FRYLO94915 3013 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 WDFY4Q6ZS81 3184 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 LRRK1Q38SD2 2015 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 NUP214P35658 2090 aaPredicted RBP7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 CXorf51AA0A1B0GTR3 108 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 NR5A2O00482 541 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 RAD51BO15315 384 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 DNAJA2O60884 412 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 RSL1D1O76021 490 aaKnown RBP7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 RECQL5O94762 991 aaPredicted RBP7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 EPHX1P07099 455 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 SRPRAP08240 638 aaKnown RBP7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 OR56A5P0C7T3 313 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 UROSP10746 265 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 VCLP18206 1134 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 IL12AP29459 219 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 NEK2P51955 445 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 PLIN5Q00G26 463 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 HMGCS1Q01581 520 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 RUNX3Q13761 415 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 LRP8Q14114 963 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 PCBP2Q15366 365 aaKnown RBP eCLIP7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 CRY1Q16526 586 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 ZNF423Q2M1K9 1284 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 MMEL1Q495T6 779 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 PIGGQ5H8A4 983 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 REP15Q6BDI9 236 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 FBXL19Q6PCT2 694 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 IL27RAQ6UWB1 636 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 UBE2R2Q712K3 238 aaPredicted RBP7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 KBTBD2Q8IY47 623 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 SLC22A15Q8IZD6 547 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 ARHGAP24Q8N264 748 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 PDPRQ8NCN5 879 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 BTN2A2Q8WVV5 523 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 ELMO1Q92556 727 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 CD244Q9BZW8 370 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 WWOXQ9NZC7 414 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 NUDT4Q9NZJ9 180 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 CLEC1BQ9P126 229 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 SERGEFQ9UGK8 458 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 SLC8A2Q9UPR5 921 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 ZNF106Q9H2Y7 1883 aaKnown RBP7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 TSPAN11A1L157 253 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 CIB2O75838 187 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 MLYCDO95822 493 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 SNRPB2P08579 225 aaKnown RBP7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 CYP2A6P11509 494 aaPredicted RBP7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 ZNF30P17039 623 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 ITPKAP23677 461 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 GDI1P31150 447 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 ZFP36L2P47974 494 aaKnown RBP7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 CCNG1P51959 295 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 TMEM115Q12893 351 aaPredicted RBP7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 CAPRIN1Q14444 709 aaKnown RBP7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 SQLEQ14534 574 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 CPSF6Q16630 551 aaKnown RBP eCLIP7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 TRMT5Q32P41 509 aaKnown RBP7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 C6orf136Q5SQH8 315 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 WLSQ5T9L3 541 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 LYPLAL1Q5VWZ2 237 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 NEK5Q6P3R8 708 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 TXNDC11Q6PKC3 985 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 MILR1Q7Z6M3 343 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 AFAP1L2Q8N4X5 818 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 PLA2G15Q8NCC3 412 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 PPFIBP2Q8ND30 876 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 SPDYE1Q8NFV5 336 aaPredicted RBP7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 ASB11Q8WXH4 323 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 EZH1Q92800 747 aaPredicted RBP7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 DCUN1D1Q96GG9 259 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 ZNF570Q96NI8 536 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 ZNF382Q96SR6 550 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 SLC6A17Q9H1V8 727 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 PRSS16Q9NQE7 514 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 KCTD5Q9NXV2 234 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 GDE1Q9NZC3 331 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 ADA2Q9NZK5 511 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 NOP53Q9NZM5 478 aaKnown RBP7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 CDH7Q9ULB5 785 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 SLC22A14Q9Y267 594 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 C15orf41Q9Y2V0 281 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 GPR45Q9Y5Y3 372 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 TRPM6Q9BX84 2022 aa7.25□□□□□ -1.25
SRFBP1-201ENST00000339397 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 A0A1W2PQ67 120 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 ASPDHA6ND91 283 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 PRORSD1PA6NEY8 169 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 WNT9AO14904 365 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 NRP2O60462 931 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 SNUPNO95149 360 aaKnown RBP7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 KAT7O95251 611 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 ADRB3P13945 408 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 LBPP18428 481 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 MSH3P20585 1137 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms