RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 TTC13Q8NBP0 860 aa10.4□□□□□ -0.74
CAPN3-202ENST00000337571 ANKK1Q8NFD2 765 aa10.4□□□□□ -0.74
CAPN3-202ENST00000337571 OR4E2Q8NGC2 313 aa10.4□□□□□ -0.74
CAPN3-202ENST00000337571 OR8K5Q8NH50 307 aa10.4□□□□□ -0.74
CAPN3-202ENST00000337571 CT55Q8WUE5 264 aa10.4□□□□□ -0.74
CAPN3-202ENST00000337571 LINC00615Q96LM1 132 aaPredicted RBP10.4□□□□□ -0.74
CAPN3-202ENST00000337571 FERD3LQ96RJ6 166 aa10.4□□□□□ -0.74
CAPN3-202ENST00000337571 COPS8Q99627 209 aa10.4□□□□□ -0.74
CAPN3-202ENST00000337571 EPN3Q9H201 632 aa10.4□□□□□ -0.74
CAPN3-202ENST00000337571 FAM96AQ9H5X1 160 aa10.4□□□□□ -0.74
CAPN3-202ENST00000337571 VPS37BQ9H9H4 285 aa10.4□□□□□ -0.74
CAPN3-202ENST00000337571 FANCEQ9HB96 536 aa10.4□□□□□ -0.74
CAPN3-202ENST00000337571 KCND1Q9NSA2 647 aa10.4□□□□□ -0.74
CAPN3-202ENST00000337571 SOHLH2Q9NX45 425 aa10.4□□□□□ -0.74
CAPN3-202ENST00000337571 SEMA5BQ9P283 1151 aa10.4□□□□□ -0.74
CAPN3-202ENST00000337571 SLC24A2Q9UI40 661 aa10.4□□□□□ -0.74
CAPN3-202ENST00000337571 FKBPLQ9UIM3 349 aa10.4□□□□□ -0.74
CAPN3-202ENST00000337571 MAN2B2Q9Y2E5 1009 aa10.4□□□□□ -0.74
CAPN3-202ENST00000337571 PCDHGA6Q9Y5G7 932 aa10.4□□□□□ -0.74
CAPN3-202ENST00000337571 C17orf113A0A1B0GUU1 675 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 MATN2O00339 956 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 GAPDHSO14556 408 aaPredicted RBP10.39□□□□□ -0.75
CAPN3-202ENST00000337571 CPNE3O75131 537 aaKnown RBP10.39□□□□□ -0.75
CAPN3-202ENST00000337571 RFPL1O75677 317 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 CDH3P22223 829 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 PSMB4P28070 264 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 CA5AP35218 305 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 ADRA1AP35348 466 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 TUBB4BP68371 445 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 TUBB2AQ13885 445 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 GPR33Q49SQ1 333 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 ARHGEF18Q6ZSZ5 1173 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 TAS2R42Q7RTR8 314 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 SNX20Q7Z614 316 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 KIAA1328Q86T90 577 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 HOOK3Q86VS8 718 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 NXPE1Q8N323 547 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 D2HGDHQ8N465 521 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 UBL4BQ8N7F7 174 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 ACVR1CQ8NER5 493 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 CCDC110Q8TBZ0 833 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 LCN9Q8WX39 176 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 THAP4Q8WY91 577 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 MR1Q95460 341 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 SPATA13Q96N96 652 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 PANX2Q96RD6 677 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 C19orf43Q9BQ61 176 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 TBL1YQ9BQ87 522 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 TUBB2BQ9BVA1 445 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 SLC7A5P2Q9GIP4 190 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 SRMSQ9H3Y6 488 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 ACTL8Q9H568 366 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 KIR3DX1Q9H7L2 352 aa10.39□□□□□ -0.75
CAPN3-202ENST00000337571 FARSAQ9Y285 508 aaKnown RBP10.39□□□□□ -0.75
CAPN3-202ENST00000337571 GSAPA4D1B5 854 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 PJA2O43164 708 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 TIAF1O95411 115 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 POLR2CP19387 275 aaPredicted RBP10.38□□□□□ -0.75
CAPN3-202ENST00000337571 PTPN4P29074 926 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 MC4RP32245 332 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 PTPN7P35236 360 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 ARCN1P48444 511 aaKnown RBP10.38□□□□□ -0.75
CAPN3-202ENST00000337571 GSDMDP57764 484 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 OLIG2Q13516 323 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 SPARCL1Q14515 664 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 GPR19Q15760 415 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 IGFBP7Q16270 282 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 PARP6Q2NL67 630 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 ZRANB3Q5FWF4 1079 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 CAPRIN2Q6IMN6 1127 aaKnown RBP10.38□□□□□ -0.75
CAPN3-202ENST00000337571 TCTN3Q6NUS6 607 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 DUS1LQ6P1R4 473 aaKnown RBP10.38□□□□□ -0.75
CAPN3-202ENST00000337571 FAM199XQ6PEV8 388 aaPredicted RBP10.38□□□□□ -0.75
CAPN3-202ENST00000337571 ASB18Q6ZVZ8 466 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 SYVN1Q86TM6 617 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 ATCAYQ86WG3 371 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 SYCE1Q8N0S2 351 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 TXLNBQ8N3L3 684 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 OR13C4Q8NGS5 318 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 HM13Q8TCT9 377 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 CPT1BQ92523 772 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 COL26A1Q96A83 441 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 CLIP3Q96DZ5 547 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 FAM118BQ9BPY3 351 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 SYTL2Q9HCH5 934 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 C1GALT1Q9NS00 363 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 ZDHHC3Q9NYG2 299 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 SERTAD3Q9UJW9 196 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 TLK1Q9UKI8 766 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 AMFRQ9UKV5 643 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 TP53TG5Q9Y2B4 290 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 DUSP10Q9Y6W6 482 aa10.38□□□□□ -0.75
CAPN3-202ENST00000337571 SOWAHDA6NJG2 315 aa10.37□□□□□ -0.75
CAPN3-202ENST00000337571 SLC9B1P1A6NJY1 282 aa10.37□□□□□ -0.75
CAPN3-202ENST00000337571 AGAP14A8MT82 685 aa10.37□□□□□ -0.75
CAPN3-202ENST00000337571 BTNL10A8MVZ5 291 aa10.37□□□□□ -0.75
CAPN3-202ENST00000337571 PSMD3O43242 534 aa10.37□□□□□ -0.75
CAPN3-202ENST00000337571 GAS8O95995 478 aa10.37□□□□□ -0.75
CAPN3-202ENST00000337571 GSTM1P09488 218 aa10.37□□□□□ -0.75
CAPN3-202ENST00000337571 FURINP09958 794 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms