RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 GRAMD4Q6IC98 578 aa22.69■■□□□ 1.22
CLPTM1-201ENST00000337392 ITFG1Q8TB96 612 aa22.69■■□□□ 1.22
CLPTM1-201ENST00000337392 CIB1Q99828 191 aa22.69■■□□□ 1.22
CLPTM1-201ENST00000337392 PIDD1Q9HB75 910 aa22.69■■□□□ 1.22
CLPTM1-201ENST00000337392 INSL6Q9Y581 213 aa22.69■■□□□ 1.22
CLPTM1-201ENST00000337392 AP4S1Q9Y587 144 aa22.69■■□□□ 1.22
CLPTM1-201ENST00000337392 A0A1B0GTW7 788 aa22.69■■□□□ 1.22
CLPTM1-201ENST00000337392 SLC22A3O75751 556 aa22.69■■□□□ 1.22
CLPTM1-201ENST00000337392 B3GALT4O96024 378 aa22.69■■□□□ 1.22
CLPTM1-201ENST00000337392 AKT1P31749 480 aa22.69■■□□□ 1.22
CLPTM1-201ENST00000337392 VIPR2P41587 438 aa22.69■■□□□ 1.22
CLPTM1-201ENST00000337392 ATP4BP51164 291 aa22.69■■□□□ 1.22
CLPTM1-201ENST00000337392 NEK2P51955 445 aa22.69■■□□□ 1.22
CLPTM1-201ENST00000337392 RPL38P63173 70 aaKnown RBP22.69■■□□□ 1.22
CLPTM1-201ENST00000337392 THEMIS2Q5TEJ8 643 aa22.69■■□□□ 1.22
CLPTM1-201ENST00000337392 FAM109BQ6ICB4 259 aaPredicted RBP22.69■■□□□ 1.22
CLPTM1-201ENST00000337392 HMBOX1Q6NT76 420 aa22.69■■□□□ 1.22
CLPTM1-201ENST00000337392 USP45Q70EL2 814 aa22.69■■□□□ 1.22
CLPTM1-201ENST00000337392 RALGPS2Q86X27 583 aaPredicted RBP22.69■■□□□ 1.22
CLPTM1-201ENST00000337392 PCYOX1LQ8NBM8 494 aa22.69■■□□□ 1.22
CLPTM1-201ENST00000337392 SPPL3Q8TCT6 385 aa22.69■■□□□ 1.22
CLPTM1-201ENST00000337392 RHBDF1Q96CC6 855 aa22.69■■□□□ 1.22
CLPTM1-201ENST00000337392 CNBD2Q96M20 576 aa22.69■■□□□ 1.22
CLPTM1-201ENST00000337392 COPS8Q99627 209 aa22.69■■□□□ 1.22
CLPTM1-201ENST00000337392 SCOCQ9UIL1 159 aa22.69■■□□□ 1.22
CLPTM1-201ENST00000337392 LOC730098B7Z3J9 87 aa22.68■■□□□ 1.22
CLPTM1-201ENST00000337392 PLK4O00444 970 aa22.68■■□□□ 1.22
CLPTM1-201ENST00000337392 MED21Q13503 144 aa22.68■■□□□ 1.22
CLPTM1-201ENST00000337392 SELPLGQ14242 412 aa22.68■■□□□ 1.22
CLPTM1-201ENST00000337392 CPSF6Q16630 551 aaKnown RBP eCLIP22.68■■□□□ 1.22
CLPTM1-201ENST00000337392 AP5B1Q2VPB7 878 aa22.68■■□□□ 1.22
CLPTM1-201ENST00000337392 TBC1D25Q3MII6 688 aa22.68■■□□□ 1.22
CLPTM1-201ENST00000337392 NECAB2Q7Z6G3 386 aa22.68■■□□□ 1.22
CLPTM1-201ENST00000337392 LMNTD1Q8N9Z9 388 aa22.68■■□□□ 1.22
CLPTM1-201ENST00000337392 PPWD1Q96BP3 646 aaKnown RBP22.68■■□□□ 1.22
CLPTM1-201ENST00000337392 EMILIN2Q9BXX0 1053 aa22.68■■□□□ 1.22
CLPTM1-201ENST00000337392 C6orf203Q9P0P8 240 aaPredicted RBP22.68■■□□□ 1.22
CLPTM1-201ENST00000337392 ZNF510Q9Y2H8 683 aa22.68■■□□□ 1.22
CLPTM1-201ENST00000337392 ANGPTL3Q9Y5C1 460 aa22.68■■□□□ 1.22
CLPTM1-201ENST00000337392 LSM1O15116 133 aaKnown RBP22.68■■□□□ 1.22
CLPTM1-201ENST00000337392 S100BP04271 92 aaPredicted RBP22.68■■□□□ 1.22
CLPTM1-201ENST00000337392 DGKAP23743 735 aa22.68■■□□□ 1.22
CLPTM1-201ENST00000337392 RGS4P49798 205 aa22.68■■□□□ 1.22
CLPTM1-201ENST00000337392 KCNK10P57789 538 aa22.68■■□□□ 1.22
CLPTM1-201ENST00000337392 SAMD4BQ5PRF9 694 aaKnown RBP22.68■■□□□ 1.22
CLPTM1-201ENST00000337392 DNAJC14Q6Y2X3 702 aaPredicted RBP22.68■■□□□ 1.22
CLPTM1-201ENST00000337392 DHFR2Q86XF0 187 aa22.68■■□□□ 1.22
CLPTM1-201ENST00000337392 HOMEZQ8IX15 550 aa22.68■■□□□ 1.22
CLPTM1-201ENST00000337392 PPM1MQ96MI6 270 aa22.68■■□□□ 1.22
CLPTM1-201ENST00000337392 SLC29A1Q99808 456 aa22.68■■□□□ 1.22
CLPTM1-201ENST00000337392 ATG2BQ96BY7 2078 aa22.67■■□□□ 1.22
CLPTM1-201ENST00000337392 UPK3BL1B0FP48 263 aa22.67■■□□□ 1.22
CLPTM1-201ENST00000337392 UPK3BL2E5RIL1 263 aa22.67■■□□□ 1.22
CLPTM1-201ENST00000337392 CD9P21926 228 aa22.67■■□□□ 1.22
CLPTM1-201ENST00000337392 HMOX2P30519 316 aa22.67■■□□□ 1.22
CLPTM1-201ENST00000337392 POLR2JP52435 117 aaKnown RBP22.67■■□□□ 1.22
CLPTM1-201ENST00000337392 RCAN2Q14206 197 aa22.67■■□□□ 1.22
CLPTM1-201ENST00000337392 PCBP2Q15366 365 aaKnown RBP eCLIP22.67■■□□□ 1.229e-8■□□□□ 11.1
CLPTM1-201ENST00000337392 CRY1Q16526 586 aa22.67■■□□□ 1.22
CLPTM1-201ENST00000337392 PDLIM5Q96HC4 596 aaKnown RBP22.67■■□□□ 1.22
CLPTM1-201ENST00000337392 HTATIP2Q9BUP3 242 aa22.67■■□□□ 1.22
CLPTM1-201ENST00000337392 WBP1LQ9NX94 342 aa22.67■■□□□ 1.22
CLPTM1-201ENST00000337392 EPS15L1Q9UBC2 864 aa22.67■■□□□ 1.22
CLPTM1-201ENST00000337392 OARD1Q9Y530 152 aa22.67■■□□□ 1.22
CLPTM1-201ENST00000337392 ST14Q9Y5Y6 855 aa22.67■■□□□ 1.22
CLPTM1-201ENST00000337392 CCDC154A6NI56 674 aa22.67■■□□□ 1.22
CLPTM1-201ENST00000337392 PEX1O43933 1283 aa22.67■■□□□ 1.22
CLPTM1-201ENST00000337392 RPS3P23396 243 aaKnown RBP eCLIP22.67■■□□□ 1.221e-6■■■■□ 22.5
CLPTM1-201ENST00000337392 SPINT3P49223 89 aa22.67■■□□□ 1.22
CLPTM1-201ENST00000337392 ERVK-8P63133 956 aa22.67■■□□□ 1.22
CLPTM1-201ENST00000337392 RHDQ02161 417 aa22.67■■□□□ 1.22
CLPTM1-201ENST00000337392 PDPRQ8NCN5 879 aa22.67■■□□□ 1.22
CLPTM1-201ENST00000337392 RSPRY1Q96DX4 576 aa22.67■■□□□ 1.22
CLPTM1-201ENST00000337392 ARL15Q9NXU5 204 aa22.67■■□□□ 1.22
CLPTM1-201ENST00000337392 OPTCQ9UBM4 332 aa22.67■■□□□ 1.22
CLPTM1-201ENST00000337392 CNOT6Q9ULM6 557 aaKnown RBP22.67■■□□□ 1.22
CLPTM1-201ENST00000337392 MAGEA13PA6NCF6 341 aa22.66■■□□□ 1.22
CLPTM1-201ENST00000337392 SLC2A4P14672 509 aa22.66■■□□□ 1.22
CLPTM1-201ENST00000337392 BMPR1AP36894 532 aa22.66■■□□□ 1.22
CLPTM1-201ENST00000337392 GRIA2P42262 883 aa22.66■■□□□ 1.22
CLPTM1-201ENST00000337392 CSNK1DP48730 415 aa22.66■■□□□ 1.22
CLPTM1-201ENST00000337392 MTPNP58546 118 aa22.66■■□□□ 1.22
CLPTM1-201ENST00000337392 RPL26P61254 145 aaKnown RBP22.66■■□□□ 1.22
CLPTM1-201ENST00000337392 GRIN2CQ14957 1233 aa22.66■■□□□ 1.22
CLPTM1-201ENST00000337392 PDK3Q15120 406 aa22.66■■□□□ 1.22
CLPTM1-201ENST00000337392 RARS2Q5T160 578 aaKnown RBP22.66■■□□□ 1.22
CLPTM1-201ENST00000337392 GDPD4Q6W3E5 623 aa22.66■■□□□ 1.22
CLPTM1-201ENST00000337392 MACC1Q6ZN28 852 aa22.66■■□□□ 1.22
CLPTM1-201ENST00000337392 KRTCAP2Q8N6L1 136 aa22.66■■□□□ 1.22
CLPTM1-201ENST00000337392 EME1Q96AY2 570 aa22.66■■□□□ 1.22
CLPTM1-201ENST00000337392 ATG10Q9H0Y0 220 aa22.66■■□□□ 1.22
CLPTM1-201ENST00000337392 COQ10BQ9H8M1 238 aa22.66■■□□□ 1.22
CLPTM1-201ENST00000337392 C7orf72A4D263 438 aa22.66■■□□□ 1.22
CLPTM1-201ENST00000337392 MATN4O95460 622 aa22.66■■□□□ 1.22
CLPTM1-201ENST00000337392 POP4O95707 220 aaKnown RBP22.66■■□□□ 1.22
CLPTM1-201ENST00000337392 PTPN2P17706 415 aa22.66■■□□□ 1.22
CLPTM1-201ENST00000337392 NSG1P42857 185 aa22.66■■□□□ 1.22
CLPTM1-201ENST00000337392 MAPK8P45983 427 aa22.66■■□□□ 1.22
CLPTM1-201ENST00000337392 TMEM240Q5SV17 173 aa22.66■■□□□ 1.22
CLPTM1-201ENST00000337392 OGFOD2Q6N063 350 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms