RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 PANX1Q96RD7 426 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 OSBPL2Q9H1P3 480 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 ZNF556Q9HAH1 456 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 HMG20AQ9NP66 347 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 SMPD3Q9NY59 655 aaPredicted RBP6.39□□□□□ -1.39
HMG20A-201ENST00000336216 SLCO3A1Q9UIG8 710 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 ZNF490Q9ULM2 529 aaPredicted RBP6.39□□□□□ -1.39
HMG20A-201ENST00000336216 PRKAB1Q9Y478 270 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 GPC6Q9Y625 555 aaPredicted RBP6.39□□□□□ -1.39
HMG20A-201ENST00000336216 TCRBV5S1A1TA0A578 114 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 DYTNA2CJ06 578 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 DCLK1O15075 740 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 INPPL1O15357 1258 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 COCHO43405 550 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 ERAL1O75616 437 aaKnown RBP6.38□□□□□ -1.39
HMG20A-201ENST00000336216 RFPL2O75678 378 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 EPHX1P07099 455 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 ALOX12P18054 663 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 EPORP19235 508 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 MAPK9P45984 424 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 INPP1P49441 399 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 CDH4P55283 916 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 MTPNP58546 118 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 ALDH6A1Q02252 535 aaKnown RBP6.38□□□□□ -1.39
HMG20A-201ENST00000336216 GPR17Q13304 367 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 ZNF829Q3KNS6 432 aaPredicted RBP6.38□□□□□ -1.39
HMG20A-201ENST00000336216 FAM98BQ52LJ0 330 aaKnown RBP6.38□□□□□ -1.39
HMG20A-201ENST00000336216 ZCCHC8Q6NZY4 707 aaKnown RBP6.38□□□□□ -1.39
HMG20A-201ENST00000336216 ARMCX6Q7L4S7 300 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 PAGE2Q7Z2X7 111 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 ADAMTSL2Q86TH1 951 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 CFAP206Q8IYR0 622 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 RBFAQ8N0V3 343 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 STK40Q8N2I9 435 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 ARNTL2Q8WYA1 636 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 SCAMP4Q969E2 229 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 REXO4Q9GZR2 422 aaKnown RBP6.38□□□□□ -1.39
HMG20A-201ENST00000336216 SMOC2Q9H3U7 446 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 MTG2Q9H4K7 406 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 BRD9Q9H8M2 597 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 KIAA1522Q9P206 1035 aaPredicted RBP6.38□□□□□ -1.39
HMG20A-201ENST00000336216 SPTA1P02549 2419 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 LOC100506127A0A0U1RQW1 187 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 MBLAC1A4D2B0 266 aaPredicted RBP6.38□□□□□ -1.39
HMG20A-201ENST00000336216 ANKRD66B4E2M5 251 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 SDHDO14521 159 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 RGS5O15539 181 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 ADAM12O43184 909 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 FAM189A1O60320 539 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 GBAP04062 536 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 PORP16435 677 aaPredicted RBP6.38□□□□□ -1.39
HMG20A-201ENST00000336216 DDX5P17844 614 aaKnown RBP6.38□□□□□ -1.39
HMG20A-201ENST00000336216 IFNA8P32881 189 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 CD68P34810 354 aaPredicted RBP6.38□□□□□ -1.39
HMG20A-201ENST00000336216 CDKN1CP49918 316 aaPredicted RBP6.38□□□□□ -1.39
HMG20A-201ENST00000336216 LAPTM5Q13571 262 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 SIM2Q14190 667 aaPredicted RBP6.38□□□□□ -1.39
HMG20A-201ENST00000336216 PDCD4Q53EL6 469 aaKnown RBP6.38□□□□□ -1.39
HMG20A-201ENST00000336216 C2orf27AQ580R0 203 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 CCDC80Q76M96 950 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 C8orf59Q8N0T1 100 aaPredicted RBP6.38□□□□□ -1.39
HMG20A-201ENST00000336216 RAB42Q8N4Z0 105 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 ZNF461Q8TAF7 563 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 RORBQ92753 470 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 LRCH3Q96II8 777 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 MAGEB10Q96LZ2 347 aaPredicted RBP6.38□□□□□ -1.39
HMG20A-201ENST00000336216 HEPHQ9BQS7 1158 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 NSUN3Q9H649 340 aaKnown RBP6.38□□□□□ -1.39
HMG20A-201ENST00000336216 RMND5AQ9H871 391 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 PRDM16Q9HAZ2 1276 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 WDR6Q9NNW5 1121 aaKnown RBP6.38□□□□□ -1.39
HMG20A-201ENST00000336216 IMP3Q9NV31 184 aaKnown RBP6.38□□□□□ -1.39
HMG20A-201ENST00000336216 GNPTGQ9UJJ9 305 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 SLC45A1Q9Y2W3 748 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 CEP250Q9BV73 2442 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 RBM47A0AV96 593 aaKnown RBP6.38□□□□□ -1.39
HMG20A-201ENST00000336216 PSMD11O00231 422 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 KPNA5O15131 536 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 SLC7A4O43246 635 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 MAFKO60675 156 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 STK16O75716 305 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 SEC24AO95486 1093 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 MLYCDO95822 493 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 DBTP11182 482 aaKnown RBP6.38□□□□□ -1.39
HMG20A-201ENST00000336216 ZNF26P17031 533 aaPredicted RBP6.38□□□□□ -1.39
HMG20A-201ENST00000336216 CD247P20963 164 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 POLD2P49005 469 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 PGFP49763 221 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 PRKAA2P54646 552 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 LIPEQ05469 1076 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 NIPAL4Q0D2K0 466 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 KIAA0930Q6ICG6 404 aaPredicted RBP6.38□□□□□ -1.39
HMG20A-201ENST00000336216 SCD5Q86SK9 330 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 GPR180Q86V85 440 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 SIX5Q8N196 739 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 SLAIN1Q8ND83 568 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 NACC2Q96BF6 587 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 AP2M1Q96CW1 435 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 MUS81Q96NY9 551 aa6.38□□□□□ -1.39
HMG20A-201ENST00000336216 AARSD1Q9BTE6 412 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms