RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 Q6ZSR9 355 aa12.36□□□□□ -0.43
LIMK1-201ENST00000336180 MIER2Q8N344 545 aa12.36□□□□□ -0.43
LIMK1-201ENST00000336180 PKP2Q99959 881 aa12.36□□□□□ -0.43
LIMK1-201ENST00000336180 TMEM79Q9BSE2 394 aa12.36□□□□□ -0.43
LIMK1-201ENST00000336180 APPL1Q9UKG1 709 aa12.36□□□□□ -0.43
LIMK1-201ENST00000336180 CORO1CQ9ULV4 474 aaPredicted RBP12.36□□□□□ -0.43
LIMK1-201ENST00000336180 BRWD1Q9NSI6 2320 aa12.36□□□□□ -0.43
LIMK1-201ENST00000336180 LTBP2Q14767 1821 aa12.36□□□□□ -0.43
LIMK1-201ENST00000336180 NUP214P35658 2090 aaPredicted RBP12.36□□□□□ -0.43
LIMK1-201ENST00000336180 FADS2P1A8MWK0 482 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 ANGPT2O15123 496 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 ESRRBO95718 433 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 PENKP01210 267 aaPredicted RBP12.35□□□□□ -0.43
LIMK1-201ENST00000336180 HSPA1AP0DMV8 641 aaKnown RBP12.35□□□□□ -0.43
LIMK1-201ENST00000336180 HSPA1BP0DMV9 641 aaKnown RBP12.35□□□□□ -0.43
LIMK1-201ENST00000336180 G6PDP11413 515 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 SLC2A4P14672 509 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 SPINT3P49223 89 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 GK3PQ14409 553 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 ELMO1Q92556 727 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 FAR2Q96K12 515 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 FAM126AQ9BYI3 521 aaPredicted RBP12.35□□□□□ -0.43
LIMK1-201ENST00000336180 INTS7Q9NVH2 962 aaKnown RBP12.35□□□□□ -0.43
LIMK1-201ENST00000336180 STK39Q9UEW8 545 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 AURKCQ9UQB9 309 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 MAP3K13O43283 966 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 CREMQ03060 361 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 NRF1Q16656 503 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 FNDC3BQ53EP0 1204 aaKnown RBP12.35□□□□□ -0.43
LIMK1-201ENST00000336180 FAM78AQ5JUQ0 283 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 GRAMD4Q6IC98 578 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 ADNP2Q6IQ32 1131 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 VN1R2Q8NFZ6 395 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 MRGPRX3Q96LB0 322 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 PPM1MQ96MI6 270 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 TRMOQ9BU70 441 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 POPDC3Q9HBV1 291 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 CROTQ9UKG9 612 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 VPS9D1Q9Y2B5 631 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 ZNF510Q9Y2H8 683 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 YBX2Q9Y2T7 364 aaKnown RBP12.35□□□□□ -0.43
LIMK1-201ENST00000336180 LRRC42Q9Y546 428 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 SOCS5O75159 536 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 XYLBO75191 536 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 LRATO95237 230 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 TIMP2P16035 220 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 ATP6V1C1P21283 382 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 PRDX6P30041 224 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 RGS4P49798 205 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 INHBCP55103 352 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 UBE2R2Q712K3 238 aaPredicted RBP12.35□□□□□ -0.43
LIMK1-201ENST00000336180 ARHGAP22Q7Z5H3 698 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 KRTCAP2Q8N6L1 136 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 HEPHQ9BQS7 1158 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 TMEM98Q9Y2Y6 226 aa12.35□□□□□ -0.43
LIMK1-201ENST00000336180 RAD51BO15315 384 aa12.34□□□□□ -0.43
LIMK1-201ENST00000336180 LINC01565O15544 149 aa12.34□□□□□ -0.43
LIMK1-201ENST00000336180 ADH5P11766 374 aa12.34□□□□□ -0.43
LIMK1-201ENST00000336180 GRIA3P42263 894 aa12.34□□□□□ -0.43
LIMK1-201ENST00000336180 SOX9P48436 509 aa12.34□□□□□ -0.43
LIMK1-201ENST00000336180 RPIAP49247 311 aa12.34□□□□□ -0.43
LIMK1-201ENST00000336180 SHHQ15465 462 aa12.34□□□□□ -0.43
LIMK1-201ENST00000336180 MAP7D1Q3KQU3 841 aa12.34□□□□□ -0.43
LIMK1-201ENST00000336180 PRSS36Q5K4E3 855 aa12.34□□□□□ -0.43
LIMK1-201ENST00000336180 MPP7Q5T2T1 576 aa12.34□□□□□ -0.43
LIMK1-201ENST00000336180 ELMSAN1Q6PJG2 1045 aa12.34□□□□□ -0.43
LIMK1-201ENST00000336180 DOK6Q6PKX4 331 aa12.34□□□□□ -0.43
LIMK1-201ENST00000336180 SPPL2CQ8IUH8 684 aa12.34□□□□□ -0.43
LIMK1-201ENST00000336180 ICA1LQ8NDH6 482 aa12.34□□□□□ -0.43
LIMK1-201ENST00000336180 KLK6Q92876 244 aa12.34□□□□□ -0.43
LIMK1-201ENST00000336180 ULK4Q96C45 1275 aa12.34□□□□□ -0.43
LIMK1-201ENST00000336180 ZNF184Q99676 751 aaPredicted RBP12.34□□□□□ -0.43
LIMK1-201ENST00000336180 ECSITQ9BQ95 431 aa12.34□□□□□ -0.43
LIMK1-201ENST00000336180 FAM83DQ9H4H8 585 aa12.34□□□□□ -0.43
LIMK1-201ENST00000336180 DNAAF2Q9NVR5 837 aaKnown RBP12.34□□□□□ -0.43
LIMK1-201ENST00000336180 DLGAP2Q9P1A6 1054 aa12.34□□□□□ -0.43
LIMK1-201ENST00000336180 OPTCQ9UBM4 332 aa12.34□□□□□ -0.43
LIMK1-201ENST00000336180 NUMA1Q14980 2115 aa12.34□□□□□ -0.43
LIMK1-201ENST00000336180 EPOPA6NHQ4 379 aa12.34□□□□□ -0.43
LIMK1-201ENST00000336180 NME4O00746 187 aa12.34□□□□□ -0.43
LIMK1-201ENST00000336180 RNASEH2AO75792 299 aaKnown RBP12.34□□□□□ -0.43
LIMK1-201ENST00000336180 C1QCP02747 245 aa12.34□□□□□ -0.43
LIMK1-201ENST00000336180 NFYCQ13952 458 aa12.34□□□□□ -0.43
LIMK1-201ENST00000336180 AP5B1Q2VPB7 878 aa12.34□□□□□ -0.43
LIMK1-201ENST00000336180 C6orf136Q5SQH8 315 aa12.34□□□□□ -0.43
LIMK1-201ENST00000336180 TMEM154Q6P9G4 183 aa12.34□□□□□ -0.43
LIMK1-201ENST00000336180 PARS2Q7L3T8 475 aaKnown RBP12.34□□□□□ -0.43
LIMK1-201ENST00000336180 LRTOMTQ8WZ04 291 aa12.34□□□□□ -0.43
LIMK1-201ENST00000336180 SERPINI1Q99574 410 aa12.34□□□□□ -0.43
LIMK1-201ENST00000336180 PDE10AQ9Y233 779 aa12.34□□□□□ -0.43
LIMK1-201ENST00000336180 ASPDHA6ND91 283 aa12.33□□□□□ -0.43
LIMK1-201ENST00000336180 C16orf96A6NNT2 1141 aa12.33□□□□□ -0.43
LIMK1-201ENST00000336180 TSPAN6O43657 245 aa12.33□□□□□ -0.43
LIMK1-201ENST00000336180 PEX1O43933 1283 aa12.33□□□□□ -0.43
LIMK1-201ENST00000336180 TIPRLO75663 272 aa12.33□□□□□ -0.43
LIMK1-201ENST00000336180 CHEK2O96017 543 aa12.33□□□□□ -0.43
LIMK1-201ENST00000336180 DGKAP23743 735 aa12.33□□□□□ -0.43
LIMK1-201ENST00000336180 PDHA2P29803 388 aa12.33□□□□□ -0.43
LIMK1-201ENST00000336180 NNMTP40261 264 aa12.33□□□□□ -0.43
LIMK1-201ENST00000336180 STX5Q13190 355 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms