RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 MT-ND3P03897 115 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 SBK3P0C264 359 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 MYZAPP0CAP1 466 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 GIMD1P0DJR0 217 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 PPARGP37231 505 aaPredicted RBP16.17■□□□□ 0.18
SHOX-201ENST00000334060 SERPINB8P50452 374 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 SPEM2Q0P670 501 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 OR4D1Q15615 310 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 C11orf74Q86VG3 221 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 ZNF548Q8NEK5 533 aaPredicted RBP16.17■□□□□ 0.18
SHOX-201ENST00000334060 RUFY1Q96T51 708 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 GTPBP2Q9BX10 602 aaKnown RBP16.17■□□□□ 0.18
SHOX-201ENST00000334060 WWP1Q9H0M0 922 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 OR52A5Q9H2C5 316 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 TMEM216Q9P0N5 145 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 SLC17A7Q9P2U7 560 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 VPS9D1Q9Y2B5 631 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 LNP1A1A4G5 178 aa16.16■□□□□ 0.18
SHOX-201ENST00000334060 TNFRSF10CO14798 259 aa16.16■□□□□ 0.18
SHOX-201ENST00000334060 FFAR2O15552 330 aa16.16■□□□□ 0.18
SHOX-201ENST00000334060 GNSP15586 552 aa16.16■□□□□ 0.18
SHOX-201ENST00000334060 BDKRB1P46663 353 aa16.16■□□□□ 0.18
SHOX-201ENST00000334060 CLCNKAP51800 687 aa16.16■□□□□ 0.18
SHOX-201ENST00000334060 PTK2BQ14289 1009 aa16.16■□□□□ 0.18
SHOX-201ENST00000334060 RASA2Q15283 850 aa16.16■□□□□ 0.18
SHOX-201ENST00000334060 PHKG1Q16816 387 aa16.16■□□□□ 0.18
SHOX-201ENST00000334060 PLA2G2CQ5R387 149 aa16.16■□□□□ 0.18
SHOX-201ENST00000334060 TIFABQ6ZNK6 161 aa16.16■□□□□ 0.18
SHOX-201ENST00000334060 CLEC14AQ86T13 490 aa16.16■□□□□ 0.18
SHOX-201ENST00000334060 TLCD1Q96CP7 247 aa16.16■□□□□ 0.18
SHOX-201ENST00000334060 PGM2Q96G03 612 aa16.16■□□□□ 0.18
SHOX-201ENST00000334060 UBXN10Q96LJ8 280 aa16.16■□□□□ 0.18
SHOX-201ENST00000334060 GAREM1Q9H706 876 aa16.16■□□□□ 0.18
SHOX-201ENST00000334060 ANKRD12Q6UB98 2062 aa16.16■□□□□ 0.18
SHOX-201ENST00000334060 ZNF292O60281 2723 aa16.15■□□□□ 0.18
SHOX-201ENST00000334060 PIAS2O75928 621 aa16.15■□□□□ 0.18
SHOX-201ENST00000334060 TNFP01375 233 aa16.15■□□□□ 0.18
SHOX-201ENST00000334060 FTH1P02794 183 aa16.15■□□□□ 0.18
SHOX-201ENST00000334060 KELP23276 732 aa16.15■□□□□ 0.18
SHOX-201ENST00000334060 TSNQ15631 228 aaKnown RBP16.15■□□□□ 0.18
SHOX-201ENST00000334060 C18orf21Q32NC0 220 aaPredicted RBP16.15■□□□□ 0.18
SHOX-201ENST00000334060 ZNF761Q86XN6 746 aaPredicted RBP16.15■□□□□ 0.18
SHOX-201ENST00000334060 SKA2Q8WVK7 121 aaPredicted RBP16.15■□□□□ 0.18
SHOX-201ENST00000334060 INSM2Q96T92 566 aaPredicted RBP16.15■□□□□ 0.18
SHOX-201ENST00000334060 ELF4Q99607 663 aaPredicted RBP16.15■□□□□ 0.18
SHOX-201ENST00000334060 UTP6Q9NYH9 597 aaKnown RBP16.15■□□□□ 0.18
SHOX-201ENST00000334060 SIRPGQ9P1W8 387 aa16.15■□□□□ 0.18
SHOX-201ENST00000334060 PLAGL1Q9UM63 463 aa16.15■□□□□ 0.18
SHOX-201ENST00000334060 ARID1BQ8NFD5 2236 aaPredicted RBP16.15■□□□□ 0.18
SHOX-201ENST00000334060 A6NCN8 305 aa16.15■□□□□ 0.18
SHOX-201ENST00000334060 NEMP2A6NFY4 417 aa16.15■□□□□ 0.18
SHOX-201ENST00000334060 TK2O00142 265 aa16.15■□□□□ 0.18
SHOX-201ENST00000334060 EBAG9O00559 213 aa16.15■□□□□ 0.18
SHOX-201ENST00000334060 PFDN6O15212 129 aa16.15■□□□□ 0.18
SHOX-201ENST00000334060 TPBGLP0DKB5 382 aa16.15■□□□□ 0.18
SHOX-201ENST00000334060 CD1DP15813 335 aa16.15■□□□□ 0.18
SHOX-201ENST00000334060 ENGP17813 658 aa16.15■□□□□ 0.18
SHOX-201ENST00000334060 DGKAP23743 735 aa16.15■□□□□ 0.18
SHOX-201ENST00000334060 CCNFP41002 786 aa16.15■□□□□ 0.18
SHOX-201ENST00000334060 SLC12A2P55011 1212 aa16.15■□□□□ 0.18
SHOX-201ENST00000334060 DUOXA1Q1HG43 343 aa16.15■□□□□ 0.18
SHOX-201ENST00000334060 ZXDCQ2QGD7 858 aaPredicted RBP16.15■□□□□ 0.18
SHOX-201ENST00000334060 SYTL3Q4VX76 610 aa16.15■□□□□ 0.18
SHOX-201ENST00000334060 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.15■□□□□ 0.18
SHOX-201ENST00000334060 METRNLQ641Q3 311 aa16.15■□□□□ 0.18
SHOX-201ENST00000334060 SLC23A3Q6PIS1 610 aa16.15■□□□□ 0.18
SHOX-201ENST00000334060 TMEM151AQ8N4L1 468 aa16.15■□□□□ 0.18
SHOX-201ENST00000334060 GABPB2Q8TAK5 448 aaPredicted RBP16.15■□□□□ 0.18
SHOX-201ENST00000334060 HM13Q8TCT9 377 aa16.15■□□□□ 0.18
SHOX-201ENST00000334060 GPBAR1Q8TDU6 330 aa16.15■□□□□ 0.18
SHOX-201ENST00000334060 SCG3Q8WXD2 468 aaKnown RBP16.15■□□□□ 0.18
SHOX-201ENST00000334060 INPP5DQ92835 1189 aa16.15■□□□□ 0.18
SHOX-201ENST00000334060 EXT2Q93063 718 aa16.15■□□□□ 0.18
SHOX-201ENST00000334060 PANX3Q96QZ0 392 aa16.15■□□□□ 0.18
SHOX-201ENST00000334060 ZDHHC5Q9C0B5 715 aa16.15■□□□□ 0.18
SHOX-201ENST00000334060 TAAR2Q9P1P5 351 aa16.15■□□□□ 0.18
SHOX-201ENST00000334060 CPSF2Q9P2I0 782 aaKnown RBP16.15■□□□□ 0.18
SHOX-201ENST00000334060 WDFY3Q8IZQ1 3526 aa16.14■□□□□ 0.17
SHOX-201ENST00000334060 YY2O15391 372 aa16.14■□□□□ 0.17
SHOX-201ENST00000334060 SLCO2B1O94956 709 aa16.14■□□□□ 0.17
SHOX-201ENST00000334060 NUBP1P53384 320 aa16.14■□□□□ 0.17
SHOX-201ENST00000334060 GYS2P54840 703 aa16.14■□□□□ 0.17
SHOX-201ENST00000334060 OVGP1Q12889 678 aa16.14■□□□□ 0.17
SHOX-201ENST00000334060 TAF8Q7Z7C8 310 aa16.14■□□□□ 0.17
SHOX-201ENST00000334060 NAGSQ8N159 534 aa16.14■□□□□ 0.17
SHOX-201ENST00000334060 BANPQ8N9N5 519 aa16.14■□□□□ 0.17
SHOX-201ENST00000334060 OR5AR1Q8NGP9 310 aa16.14■□□□□ 0.17
SHOX-201ENST00000334060 MDM1Q8TC05 714 aa16.14■□□□□ 0.17
SHOX-201ENST00000334060 TIMM29Q9BSF4 260 aa16.14■□□□□ 0.17
SHOX-201ENST00000334060 ALG9Q9H6U8 611 aa16.14■□□□□ 0.17
SHOX-201ENST00000334060 LATS2Q9NRM7 1088 aa16.14■□□□□ 0.17
SHOX-201ENST00000334060 CORO1CQ9ULV4 474 aaPredicted RBP16.14■□□□□ 0.17
SHOX-201ENST00000334060 PDZK1P1A8MUH7 402 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 B4DGG1 531 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 GDF9O60383 454 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 CTSEP14091 401 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 ACADLP28330 430 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 HPDP32754 393 aaPredicted RBP16.13■□□□□ 0.17
SHOX-201ENST00000334060 RPA3P35244 121 aaPredicted RBP16.13■□□□□ 0.17
SHOX-201ENST00000334060 MAZP56270 477 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms