RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 H3BNC9 293 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 XYLBO75191 536 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 ANXA6P08133 673 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 HTR1AP08908 422 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 C7P10643 843 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 IRF1P10914 325 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 CTU2Q2VPK5 515 aaKnown RBP12.12□□□□□ -0.47
VPS33B-201ENST00000333371 SLC44A4Q53GD3 710 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 ALG1LQ6GMV1 187 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 SULT1C3Q6IMI6 304 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 TXNDC11Q6PKC3 985 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 FRA10AC1Q70Z53 315 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 CROCCP3Q8IVE0 287 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 CLDN19Q8N6F1 224 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 DBF4BQ8NFT6 615 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 OR6K2Q8NGY2 324 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 ZNF420Q8TAQ5 688 aaPredicted RBP12.12□□□□□ -0.47
VPS33B-201ENST00000333371 LKAAEAR1Q8TD35 194 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 WBP2Q969T9 261 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 IPPKQ9H8X2 491 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 CHCHD3Q9NX63 227 aaKnown RBP12.12□□□□□ -0.47
VPS33B-201ENST00000333371 ELOVL2Q9NXB9 296 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 IL37Q9NZH6 218 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 MAGEL2Q9UJ55 1249 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 INVSQ9Y283 1065 aa12.12□□□□□ -0.47
VPS33B-201ENST00000333371 TET1Q8NFU7 2136 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 FAM92AA1XBS5 289 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 DEAF1O75398 565 aaPredicted RBP12.11□□□□□ -0.47
VPS33B-201ENST00000333371 KLKB1P03952 638 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 ALDH2P05091 517 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 ALPIP09923 528 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 RAP2AP10114 183 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 MBL2P11226 248 aaPredicted RBP12.11□□□□□ -0.47
VPS33B-201ENST00000333371 COL6A1P12109 1028 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 GGT1P19440 569 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 CLCN7P51798 805 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 C21orf59P57076 290 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 CHRNB3Q05901 458 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 TWF1Q12792 350 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 GRIK2Q13002 908 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 GTF2H2Q13888 395 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 LAPTM4AQ15012 233 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 FXNQ16595 210 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 FAM174BQ3ZCQ3 159 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 GTF2H2CQ6P1K8 395 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 GALNT18Q6P9A2 607 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 SPESP1Q6UW49 350 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 SBSNQ6UWP8 590 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 MBOAT1Q6ZNC8 495 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 SLC43A3Q8NBI5 491 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 LZICQ8WZA0 190 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 BHMTQ93088 406 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 GFM2Q969S9 779 aaKnown RBP12.11□□□□□ -0.47
VPS33B-201ENST00000333371 MTFMTQ96DP5 389 aaKnown RBP12.11□□□□□ -0.47
VPS33B-201ENST00000333371 ERLEC1Q96DZ1 483 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 APOL5Q9BWW9 433 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 TYW5A2RUC4 315 aaKnown RBP12.11□□□□□ -0.47
VPS33B-201ENST00000333371 OR6C75A6NL08 312 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 G3V2T6 193 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 ACSL4O60488 711 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 CPNE6O95741 557 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 CST1P01037 141 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 C1QCP02747 245 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 CCNA2P20248 432 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 CRHBPP24387 322 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 TTPAP49638 278 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 FAM98BQ52LJ0 330 aaKnown RBP12.11□□□□□ -0.47
VPS33B-201ENST00000333371 SPANXN4Q5MJ08 99 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 C16orf87Q6PH81 154 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 PIWIL3Q7Z3Z3 882 aaKnown RBP12.11□□□□□ -0.47
VPS33B-201ENST00000333371 BTLAQ7Z6A9 289 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 PARP8Q8N3A8 854 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 DPP10Q8N608 796 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 SLAIN1Q8ND83 568 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 OR2T12Q8NG77 320 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 FRS2Q8WU20 508 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 MBOAT4Q96T53 435 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 NACA2Q9H009 215 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.11□□□□□ -0.47
VPS33B-201ENST00000333371 HEBP1Q9NRV9 189 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 TBC1D23Q9NUY8 699 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 SLC25A37Q9NYZ2 338 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.11□□□□□ -0.47
VPS33B-201ENST00000333371 ADGRE2Q9UHX3 823 aa12.11□□□□□ -0.47
VPS33B-201ENST00000333371 PRRC2BQ5JSZ5 2229 aaKnown RBP12.11□□□□□ -0.47
VPS33B-201ENST00000333371 C1orf232A0A0U1RR37 186 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 A8MX80 341 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 PTGES3LE9PB15 166 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 GSTA4O15217 222 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 ZSCAN9O15535 394 aaPredicted RBP12.1□□□□□ -0.47
VPS33B-201ENST00000333371 NBNO60934 754 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 PRKD3O94806 890 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 F11P03951 625 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 FSHRP23945 695 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 MAGEA11P43364 429 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 PLA2G16P53816 162 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 TPD52P55327 224 aaPredicted RBP12.1□□□□□ -0.47
VPS33B-201ENST00000333371 SEMG2Q02383 582 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 TRAF3Q13114 568 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 PWP1Q13610 501 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms