RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 CYP7B1O75881 506 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 MLNP12872 115 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 SRCP12931 536 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 CD36P16671 472 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 MAGEA12P43365 314 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 MASP1P48740 699 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 PER3P56645 1201 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 PLIN5Q00G26 463 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 POU5F1BQ06416 359 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 KIF19Q2TAC6 998 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 RBM20Q5T481 1227 aaKnown RBP11.67□□□□□ -0.54
SHMT2-201ENST00000328923 CMC1Q7Z7K0 106 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 GPALPP1Q8IXQ4 340 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 CLEC4FQ8N1N0 589 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 ZNF680Q8NEM1 530 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 OR6P1Q8NGX9 317 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 RNF157Q96PX1 679 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 APOL4Q9BPW4 351 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 FAM126AQ9BYI3 521 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-201ENST00000328923 ABCG4Q9H172 646 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 SLC6A15Q9H2J7 730 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 ELOVL6Q9H5J4 265 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 ZCCHC4Q9H5U6 513 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 CISHQ9NSE2 258 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 ING3Q9NXR8 418 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 COA4Q9NYJ1 87 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 ELF5Q9UKW6 265 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-201ENST00000328923 RAP2CQ9Y3L5 183 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 KPNA7A9QM74 516 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 LOC110117498-PIK3R3F6TDL0 507 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 WWP2O00308 870 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 ANGPT2O15123 496 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 KPNA5O15131 536 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 MED7O43513 233 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 FCGR1AP12314 374 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 ZNF3P17036 446 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 CDH6P55285 790 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 BACE1P56817 501 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 PDK2Q15119 407 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 ARL13AQ5H913 290 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-201ENST00000328923 SPANXN2Q5MJ10 180 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 PDSS1Q5T2R2 415 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 C10orf62Q5T681 223 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-201ENST00000328923 TIGD7Q6NT04 549 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-201ENST00000328923 ZSWIM9Q86XI8 627 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 XYLT1Q86Y38 959 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 APOBEC3FQ8IUX4 373 aaKnown RBP11.67□□□□□ -0.54
SHMT2-201ENST00000328923 CDKL3Q8IVW4 592 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-201ENST00000328923 PLD5Q8N7P1 536 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 ZNF565Q8N9K5 539 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 SLC5A11Q8WWX8 675 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 SLC9A6Q92581 669 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 MFSD3Q96ES6 412 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 AHCYL2Q96HN2 611 aaKnown RBP11.67□□□□□ -0.54
SHMT2-201ENST00000328923 LINC00052Q96N35 136 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 ACOX2Q99424 681 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 GTPBP2Q9BX10 602 aaKnown RBP11.67□□□□□ -0.54
SHMT2-201ENST00000328923 C1QTNF6Q9BXI9 259 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 PPIL3Q9H2H8 161 aaKnown RBP11.67□□□□□ -0.54
SHMT2-201ENST00000328923 ADAM28Q9UKQ2 775 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 MKLN1Q9UL63 735 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 KCNH4Q9UQ05 1017 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 TTC24A2A3L6 582 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-201ENST00000328923 APOL1O14791 398 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 STX7O15400 261 aaKnown RBP11.66□□□□□ -0.54
SHMT2-201ENST00000328923 FZD6O60353 706 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 FADS2O95864 444 aaKnown RBP11.66□□□□□ -0.54
SHMT2-201ENST00000328923 APOC1P02654 83 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 PTPRAP18433 802 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 RPS3P23396 243 aaKnown RBP eCLIP11.66□□□□□ -0.544e-7■■■□□ 17.6
SHMT2-201ENST00000328923 PRKAR1BP31321 381 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 GPC1P35052 558 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 TGFBR2P37173 567 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 CSKP41240 450 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 YBX1P67809 324 aaKnown RBP11.66□□□□□ -0.54
SHMT2-201ENST00000328923 FASTKQ14296 549 aaKnown RBP11.66□□□□□ -0.54
SHMT2-201ENST00000328923 TAB1Q15750 504 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 C21orf62-AS1Q17RA5 79 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 C8orf82Q6P1X6 216 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-201ENST00000328923 TEX261Q6UWH6 196 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 ADGRG3Q86Y34 549 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 TXNDC5Q8NBS9 432 aaKnown RBP11.66□□□□□ -0.54
SHMT2-201ENST00000328923 OR5B17Q8NGF7 314 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 CNIH3Q8TBE1 160 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 TFAP2BQ92481 460 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 DCLRE1CQ96SD1 692 aaKnown RBP11.66□□□□□ -0.54
SHMT2-201ENST00000328923 SLC30A3Q99726 388 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 TRIM8Q9BZR9 551 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 FAM83DQ9H4H8 585 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 FAM118AQ9NWS6 357 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 PCDHGB2Q9Y5G2 931 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 U3KQ87 197 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 PITPNM1O00562 1244 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 ARPC2O15144 300 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 TRIM13O60858 407 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 ALPLP05186 524 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 SLC2A3P11169 496 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 MYL9P24844 172 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 TYK2P29597 1187 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 BRCC3P46736 316 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms