RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 APOL2Q9BQE5 337 aa17.25■□□□□ 0.35
PTPMT1-201ENST00000326656 EPN3Q9H201 632 aa17.25■□□□□ 0.35
PTPMT1-201ENST00000326656 C1GALT1Q9NS00 363 aa17.25■□□□□ 0.35
PTPMT1-201ENST00000326656 CFAP20Q9Y6A4 193 aaKnown RBP17.25■□□□□ 0.35
PTPMT1-201ENST00000326656 DUSP10Q9Y6W6 482 aa17.25■□□□□ 0.35
PTPMT1-201ENST00000326656 LRRK2Q5S007 2527 aa17.24■□□□□ 0.35
PTPMT1-201ENST00000326656 IGLV3-16A0A075B6K0 115 aa17.24■□□□□ 0.35
PTPMT1-201ENST00000326656 RCCD1A6NED2 376 aa17.24■□□□□ 0.35
PTPMT1-201ENST00000326656 PSMD3O43242 534 aa17.24■□□□□ 0.35
PTPMT1-201ENST00000326656 MAP3K7O43318 606 aa17.24■□□□□ 0.35
PTPMT1-201ENST00000326656 LDB2O43679 373 aa17.24■□□□□ 0.35
PTPMT1-201ENST00000326656 CPNE3O75131 537 aaKnown RBP17.24■□□□□ 0.35
PTPMT1-201ENST00000326656 TIAF1O95411 115 aa17.24■□□□□ 0.35
PTPMT1-201ENST00000326656 POLBP06746 335 aa17.24■□□□□ 0.35
PTPMT1-201ENST00000326656 EBLN1P0CF75 366 aa17.24■□□□□ 0.35
PTPMT1-201ENST00000326656 PTPN4P29074 926 aa17.24■□□□□ 0.35
PTPMT1-201ENST00000326656 PMS2P54278 862 aa17.24■□□□□ 0.35
PTPMT1-201ENST00000326656 RPS15P62841 145 aaKnown RBP17.24■□□□□ 0.35
PTPMT1-201ENST00000326656 FOXK1P85037 733 aa17.24■□□□□ 0.35
PTPMT1-201ENST00000326656 KLRB1Q12918 225 aa17.24■□□□□ 0.35
PTPMT1-201ENST00000326656 RPA4Q13156 261 aa17.24■□□□□ 0.35
PTPMT1-201ENST00000326656 KCNAB1Q14722 419 aa17.24■□□□□ 0.35
PTPMT1-201ENST00000326656 SKIDA1Q1XH10 827 aa17.24■□□□□ 0.35
PTPMT1-201ENST00000326656 ZNF517Q6ZMY9 492 aaPredicted RBP17.24■□□□□ 0.35
PTPMT1-201ENST00000326656 SYVN1Q86TM6 617 aa17.24■□□□□ 0.35
PTPMT1-201ENST00000326656 TXLNBQ8N3L3 684 aa17.24■□□□□ 0.35
PTPMT1-201ENST00000326656 SPDYE1Q8NFV5 336 aaPredicted RBP17.24■□□□□ 0.35
PTPMT1-201ENST00000326656 OR13C4Q8NGS5 318 aa17.24■□□□□ 0.35
PTPMT1-201ENST00000326656 ALG3Q92685 438 aa17.24■□□□□ 0.35
PTPMT1-201ENST00000326656 RMDN2Q96LZ7 410 aa17.24■□□□□ 0.35
PTPMT1-201ENST00000326656 TWSG1Q9GZX9 223 aa17.24■□□□□ 0.35
PTPMT1-201ENST00000326656 ZDHHC3Q9NYG2 299 aa17.24■□□□□ 0.35
PTPMT1-201ENST00000326656 TRBV5-4A0A0C4DH59 114 aa17.23■□□□□ 0.35
PTPMT1-201ENST00000326656 SOWAHDA6NJG2 315 aa17.23■□□□□ 0.35
PTPMT1-201ENST00000326656 MIF4GDA9UHW6 222 aaKnown RBP17.23■□□□□ 0.35
PTPMT1-201ENST00000326656 RFPL1O75677 317 aa17.23■□□□□ 0.35
PTPMT1-201ENST00000326656 KLK3P07288 261 aaPredicted RBP17.23■□□□□ 0.35
PTPMT1-201ENST00000326656 ZNF75DP51815 510 aa17.23■□□□□ 0.35
PTPMT1-201ENST00000326656 VAV2P52735 878 aa17.23■□□□□ 0.35
PTPMT1-201ENST00000326656 GSDMDP57764 484 aa17.23■□□□□ 0.35
PTPMT1-201ENST00000326656 IZUMO3Q5VZ72 239 aa17.23■□□□□ 0.35
PTPMT1-201ENST00000326656 KCTD11Q693B1 232 aa17.23■□□□□ 0.35
PTPMT1-201ENST00000326656 SYCE1Q8N0S2 351 aa17.23■□□□□ 0.35
PTPMT1-201ENST00000326656 LCN9Q8WX39 176 aa17.23■□□□□ 0.35
PTPMT1-201ENST00000326656 ZNF501Q96CX3 271 aaPredicted RBP17.23■□□□□ 0.35
PTPMT1-201ENST00000326656 LACRTQ9GZZ8 138 aa17.23■□□□□ 0.35
PTPMT1-201ENST00000326656 ACTL8Q9H568 366 aa17.23■□□□□ 0.35
PTPMT1-201ENST00000326656 TFB2MQ9H5Q4 396 aaKnown RBP17.23■□□□□ 0.35
PTPMT1-201ENST00000326656 MVB12BQ9H7P6 319 aa17.23■□□□□ 0.35
PTPMT1-201ENST00000326656 LRRC40Q9H9A6 602 aa17.23■□□□□ 0.35
PTPMT1-201ENST00000326656 NLE1Q9NVX2 485 aaPredicted RBP17.23■□□□□ 0.35
PTPMT1-201ENST00000326656 AMFRQ9UKV5 643 aa17.23■□□□□ 0.35
PTPMT1-201ENST00000326656 POMT2Q9UKY4 750 aa17.23■□□□□ 0.35
PTPMT1-201ENST00000326656 CDC14CA4D256 554 aa17.22■□□□□ 0.35
PTPMT1-201ENST00000326656 IFRD1O00458 451 aaPredicted RBP17.22■□□□□ 0.35
PTPMT1-201ENST00000326656 SCRG1O75711 98 aa17.22■□□□□ 0.35
PTPMT1-201ENST00000326656 NTRK1P04629 796 aa17.22■□□□□ 0.35
PTPMT1-201ENST00000326656 FURINP09958 794 aa17.22■□□□□ 0.35
PTPMT1-201ENST00000326656 PSMA3P25788 255 aa17.22■□□□□ 0.35
PTPMT1-201ENST00000326656 KPNA2P52292 529 aaKnown RBP17.22■□□□□ 0.35
PTPMT1-201ENST00000326656 OLIG2Q13516 323 aa17.22■□□□□ 0.35
PTPMT1-201ENST00000326656 SEMA5AQ13591 1074 aa17.22■□□□□ 0.35
PTPMT1-201ENST00000326656 UGT8Q16880 541 aa17.22■□□□□ 0.35
PTPMT1-201ENST00000326656 P3H1Q32P28 736 aa17.22■□□□□ 0.35
PTPMT1-201ENST00000326656 DUS1LQ6P1R4 473 aaKnown RBP17.22■□□□□ 0.35
PTPMT1-201ENST00000326656 ARHGEF18Q6ZSZ5 1173 aa17.22■□□□□ 0.35
PTPMT1-201ENST00000326656 TMEM126BQ8IUX1 230 aa17.22■□□□□ 0.35
PTPMT1-201ENST00000326656 UBL4BQ8N7F7 174 aa17.22■□□□□ 0.35
PTPMT1-201ENST00000326656 OR4E2Q8NGC2 313 aa17.22■□□□□ 0.35
PTPMT1-201ENST00000326656 UBE2Q2Q8WVN8 375 aa17.22■□□□□ 0.35
PTPMT1-201ENST00000326656 CPT1BQ92523 772 aa17.22■□□□□ 0.35
PTPMT1-201ENST00000326656 OR52A5Q9H2C5 316 aa17.22■□□□□ 0.35
PTPMT1-201ENST00000326656 SRMSQ9H3Y6 488 aa17.22■□□□□ 0.35
PTPMT1-201ENST00000326656 FANCEQ9HB96 536 aa17.22■□□□□ 0.35
PTPMT1-201ENST00000326656 FARSAQ9Y285 508 aaKnown RBP17.22■□□□□ 0.35
PTPMT1-201ENST00000326656 TP53TG5Q9Y2B4 290 aa17.22■□□□□ 0.35
PTPMT1-201ENST00000326656 MAN2B2Q9Y2E5 1009 aa17.22■□□□□ 0.35
PTPMT1-201ENST00000326656 REXO2Q9Y3B8 237 aaKnown RBP17.22■□□□□ 0.35
PTPMT1-201ENST00000326656 AP2A2O94973 939 aa17.21■□□□□ 0.35
PTPMT1-201ENST00000326656 PTMAP06454 111 aaKnown RBP17.21■□□□□ 0.35
PTPMT1-201ENST00000326656 ACRV1P26436 265 aa17.21■□□□□ 0.35
PTPMT1-201ENST00000326656 MC4RP32245 332 aa17.21■□□□□ 0.35
PTPMT1-201ENST00000326656 TMPRSS15P98073 1019 aa17.21■□□□□ 0.35
PTPMT1-201ENST00000326656 ZNF658BQ4V348 819 aaPredicted RBP17.21■□□□□ 0.35
PTPMT1-201ENST00000326656 CERS6Q6ZMG9 384 aa17.21■□□□□ 0.35
PTPMT1-201ENST00000326656 PEX26Q7Z412 305 aa17.21■□□□□ 0.35
PTPMT1-201ENST00000326656 SERPINA9Q86WD7 417 aa17.21■□□□□ 0.35
PTPMT1-201ENST00000326656 TEX19Q8NA77 164 aa17.21■□□□□ 0.35
PTPMT1-201ENST00000326656 STYXQ8WUJ0 223 aa17.21■□□□□ 0.35
PTPMT1-201ENST00000326656 CDKN2AIPNLQ96HQ2 116 aa17.21■□□□□ 0.35
PTPMT1-201ENST00000326656 FERD3LQ96RJ6 166 aa17.21■□□□□ 0.35
PTPMT1-201ENST00000326656 PITPNM3Q9BZ71 974 aa17.21■□□□□ 0.35
PTPMT1-201ENST00000326656 FAM96AQ9H5X1 160 aa17.21■□□□□ 0.35
PTPMT1-201ENST00000326656 COG4Q9H9E3 785 aa17.21■□□□□ 0.35
PTPMT1-201ENST00000326656 SOHLH2Q9NX45 425 aa17.21■□□□□ 0.35
PTPMT1-201ENST00000326656 TLK1Q9UKI8 766 aa17.21■□□□□ 0.35
PTPMT1-201ENST00000326656 PIKFYVEQ9Y2I7 2098 aa17.2■□□□□ 0.34
PTPMT1-201ENST00000326656 GRID2IPA4D2P6 1211 aa17.2■□□□□ 0.34
PTPMT1-201ENST00000326656 QSOX1O00391 747 aa17.2■□□□□ 0.34
PTPMT1-201ENST00000326656 RAB40ALP0C0E4 278 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms