RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 UBR3Q6ZT12 1888 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 SAMD14Q8IZD0 417 aaPredicted RBP6.96□□□□□ -1.29
SMC1A-201ENST00000322213 SELENOMQ8WWX9 145 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 KAT2AQ92830 837 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 HYLS1Q96M11 299 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 SLC9A7Q96T83 725 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 TCEAL7Q9BRU2 100 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 WDR87Q6ZQQ6 2873 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 PER2O15055 1255 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 POLR2CP19387 275 aaPredicted RBP6.96□□□□□ -1.3
SMC1A-201ENST00000322213 CCDC58Q4VC31 144 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 FAM20CQ8IXL6 584 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 SETD6Q8TBK2 473 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 NPLQ9BXD5 320 aaPredicted RBP6.96□□□□□ -1.3
SMC1A-201ENST00000322213 CNTN6Q9UQ52 1028 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 TESMINQ9Y4I5 508 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 CEPT1Q9Y6K0 416 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 RSL1D1O76021 490 aaKnown RBP6.96□□□□□ -1.3
SMC1A-201ENST00000322213 CYP2C18P33260 490 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 ASMTP46597 345 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 SELPLGQ14242 412 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 CYP2A13Q16696 494 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 TIFABQ6ZNK6 161 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 TCEAL4Q96EI5 215 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 PCDHB18PQ96TA0 734 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 MGME1Q9BQP7 344 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 OR12D3Q9UGF7 316 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 ACSL5Q9ULC5 683 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 CXCL8P10145 99 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 ARP10275 920 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 CKMT2P17540 419 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 ALDH9A1P49189 494 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 CTBP1Q13363 440 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 VMACQ2NL98 169 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 C10orf120Q5SQS8 335 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 FBXO42Q6P3S6 717 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 IGFN1Q86VF2 1251 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 ASB15Q8WXK1 588 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 SLC35B4Q969S0 331 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 FNDC11Q9BVV2 318 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 ZBTB20Q9HC78 741 aaPredicted RBP6.96□□□□□ -1.3
SMC1A-201ENST00000322213 ARL15Q9NXU5 204 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 POFUT2Q9Y2G5 429 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 PPP2R3BQ9Y5P8 575 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 FAM159BA6NKW6 160 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 SPATA31C1P0DKV0 1188 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 TGFB2P61812 414 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 FBXL19Q6PCT2 694 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 SLC22A8Q8TCC7 542 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 DEDD2Q8WXF8 326 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 MAU2Q9Y6X3 613 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 ISM1B1AKI9 464 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 PMM2O15305 246 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 HBP1O60381 514 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 OR5F1O95221 314 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 AMHP03971 560 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 GMPSP49915 693 aaPredicted RBP6.96□□□□□ -1.3
SMC1A-201ENST00000322213 HLCSP50747 726 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 TKTL1P51854 596 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 CACNB2Q08289 660 aaPredicted RBP6.96□□□□□ -1.3
SMC1A-201ENST00000322213 TEX44Q53QW1 395 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 CPTPQ5TA50 214 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 ADGRD2Q7Z7M1 963 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 FUNDC2Q9BWH2 189 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 PORCNQ9H237 461 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 MKS1Q9NXB0 559 aa6.96□□□□□ -1.3
SMC1A-201ENST00000322213 TNFRSF11BO00300 401 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 XPNPEP2O43895 674 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 LRCH4O75427 683 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 EEFSECP57772 596 aaKnown RBP6.95□□□□□ -1.3
SMC1A-201ENST00000322213 FBXO47Q5MNV8 452 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 OR2T5Q6IEZ7 315 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 ILDR2Q71H61 639 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 TXNRD3Q86VQ6 643 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 OR2T29Q8NH02 315 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 OR10A6Q8NH74 314 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 CLIP3Q96DZ5 547 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 SEMA3GQ9NS98 782 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 ZIM2Q9NZV7 527 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 F5P12259 2224 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 ZBTB24O43167 697 aaPredicted RBP6.95□□□□□ -1.3
SMC1A-201ENST00000322213 TGFB1I1O43294 461 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 MTHFD1P11586 935 aaKnown RBP6.95□□□□□ -1.3
SMC1A-201ENST00000322213 ZNF14P17017 642 aaPredicted RBP6.95□□□□□ -1.3
SMC1A-201ENST00000322213 RAB5BP61020 215 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 IRF9Q00978 393 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 MXD1Q05195 221 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 PGM5Q15124 567 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 ZNF367Q7RTV3 350 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 DPAGT1Q9H3H5 408 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 TAS2R3Q9NYW6 316 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 LRFN2Q9ULH4 789 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 ATF5Q9Y2D1 282 aaPredicted RBP6.95□□□□□ -1.3
SMC1A-201ENST00000322213 SNNO75324 88 aaPredicted RBP6.95□□□□□ -1.3
SMC1A-201ENST00000322213 NTSR2O95665 410 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 NOS2P35228 1153 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 SIM2Q14190 667 aaPredicted RBP6.95□□□□□ -1.3
SMC1A-201ENST00000322213 RFTN2Q52LD8 501 aaPredicted RBP6.95□□□□□ -1.3
SMC1A-201ENST00000322213 Q8N402 240 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 TMEM161BQ8NDZ6 487 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms