RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 PEX11BO96011 259 aa17.61■□□□□ 0.41
PRKCB-202ENST00000321728 NR6A1Q15406 480 aa17.61■□□□□ 0.41
PRKCB-202ENST00000321728 COLEC12Q5KU26 742 aa17.61■□□□□ 0.41
PRKCB-202ENST00000321728 BRMS1LQ5PSV4 323 aa17.61■□□□□ 0.41
PRKCB-202ENST00000321728 IL27RAQ6UWB1 636 aa17.61■□□□□ 0.41
PRKCB-202ENST00000321728 LRRC8DQ7L1W4 858 aa17.61■□□□□ 0.41
PRKCB-202ENST00000321728 ZNF540Q8NDQ6 660 aa17.61■□□□□ 0.41
PRKCB-202ENST00000321728 NLGN2Q8NFZ4 835 aa17.61■□□□□ 0.41
PRKCB-202ENST00000321728 OR52B6Q8NGF0 335 aa17.61■□□□□ 0.41
PRKCB-202ENST00000321728 ZNF566Q969W8 418 aa17.61■□□□□ 0.41
PRKCB-202ENST00000321728 HMCESQ96FZ2 354 aa17.61■□□□□ 0.41
PRKCB-202ENST00000321728 ZNF486Q96H40 463 aaPredicted RBP17.61■□□□□ 0.41
PRKCB-202ENST00000321728 RHNO1Q9BSD3 238 aa17.61■□□□□ 0.41
PRKCB-202ENST00000321728 SP110Q9HB58 689 aa17.61■□□□□ 0.41
PRKCB-202ENST00000321728 TMEFF2Q9UIK5 374 aaPredicted RBP17.61■□□□□ 0.41
PRKCB-202ENST00000321728 A6NL46 340 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 ARNTLO00327 626 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 CXCR6O00574 342 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 PTGESO14684 152 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 KRT75O95678 551 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 MT-ND2P03891 347 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 SMPD1P17405 629 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 MASP1P48740 699 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 IL18R1Q13478 541 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 UBXN11Q5T124 520 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 SYT6Q5T7P8 510 aaPredicted RBP17.6■□□□□ 0.41
PRKCB-202ENST00000321728 RNF19BQ6ZMZ0 732 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 MMAAQ8IVH4 418 aaKnown RBP17.6■□□□□ 0.41
PRKCB-202ENST00000321728 SVOPQ8N4V2 548 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 ZNF548Q8NEK5 533 aaPredicted RBP17.6■□□□□ 0.41
PRKCB-202ENST00000321728 OR10Q1Q8NGQ4 319 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 MIR1-1HGQ9H1L0 117 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 ACTL8Q9H568 366 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 OSER1Q9NX31 292 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 ASB1Q9Y576 335 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 PCDHB14Q9Y5E9 798 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 OTOFQ9HC10 1997 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 BRCA1P38398 1863 aaKnown RBP17.6■□□□□ 0.41
PRKCB-202ENST00000321728 ELOVL7A1L3X0 281 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 GJB3O75712 270 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 ATXN1LP0C7T5 689 aaKnown RBP17.6■□□□□ 0.41
PRKCB-202ENST00000321728 HAPLN1P10915 354 aaPredicted RBP17.6■□□□□ 0.41
PRKCB-202ENST00000321728 IGFBP5P24593 272 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 LAPTM4AQ15012 233 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 AFMIDQ63HM1 303 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 STEAP3Q658P3 488 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 LRRC49Q8IUZ0 686 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 LACC1Q8IV20 430 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 SETD9Q8NE22 299 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 TTC16Q8NEE8 873 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 METTL6Q8TCB7 284 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 REXO5Q96IC2 774 aaKnown RBP17.6■□□□□ 0.41
PRKCB-202ENST00000321728 IKZF5Q9H5V7 419 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 CD274Q9NZQ7 290 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 HS3ST4Q9Y661 456 aa17.6■□□□□ 0.41
PRKCB-202ENST00000321728 ISPDA4D126 451 aa17.59■□□□□ 0.41
PRKCB-202ENST00000321728 LCHNA4D1U4 455 aa17.59■□□□□ 0.41
PRKCB-202ENST00000321728 M0QX08 132 aa17.59■□□□□ 0.41
PRKCB-202ENST00000321728 RPP40O75818 363 aaKnown RBP17.59■□□□□ 0.41
PRKCB-202ENST00000321728 KCNK2O95069 426 aa17.59■□□□□ 0.41
PRKCB-202ENST00000321728 IGLV3-25P01717 112 aa17.59■□□□□ 0.41
PRKCB-202ENST00000321728 ACVR2AP27037 513 aa17.59■□□□□ 0.41
PRKCB-202ENST00000321728 STC1P52823 247 aa17.59■□□□□ 0.41
PRKCB-202ENST00000321728 SLC35A2P78381 396 aa17.59■□□□□ 0.41
PRKCB-202ENST00000321728 CYP4F3Q08477 520 aa17.59■□□□□ 0.41
PRKCB-202ENST00000321728 GALNT3Q14435 633 aa17.59■□□□□ 0.41
PRKCB-202ENST00000321728 RFX4Q33E94 735 aa17.59■□□□□ 0.41
PRKCB-202ENST00000321728 RHBDF1Q96CC6 855 aa17.59■□□□□ 0.41
PRKCB-202ENST00000321728 GPR21Q99679 349 aa17.59■□□□□ 0.41
PRKCB-202ENST00000321728 C6orf62Q9GZU0 229 aaPredicted RBP17.59■□□□□ 0.41
PRKCB-202ENST00000321728 KAT8Q9H7Z6 458 aaKnown RBP17.59■□□□□ 0.41
PRKCB-202ENST00000321728 MOV10Q9HCE1 1003 aaKnown RBP17.59■□□□□ 0.41
PRKCB-202ENST00000321728 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.59■□□□□ 0.41
PRKCB-202ENST00000321728 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.59■□□□□ 0.41
PRKCB-202ENST00000321728 TESMINQ9Y4I5 508 aa17.59■□□□□ 0.41
PRKCB-202ENST00000321728 TRIP12Q14669 1992 aaPredicted RBP17.59■□□□□ 0.41
PRKCB-202ENST00000321728 EFCAB9A8MZ26 197 aa17.59■□□□□ 0.41
PRKCB-202ENST00000321728 STX16O14662 325 aa17.59■□□□□ 0.41
PRKCB-202ENST00000321728 RAD51BO15315 384 aa17.59■□□□□ 0.41
PRKCB-202ENST00000321728 CD36P16671 472 aa17.59■□□□□ 0.41
PRKCB-202ENST00000321728 MSH3P20585 1137 aa17.59■□□□□ 0.41
PRKCB-202ENST00000321728 TRPC1P48995 793 aa17.59■□□□□ 0.41
PRKCB-202ENST00000321728 CLK1P49759 484 aaKnown RBP17.59■□□□□ 0.41
PRKCB-202ENST00000321728 HTR6P50406 440 aa17.59■□□□□ 0.41
PRKCB-202ENST00000321728 COPZ1P61923 177 aa17.59■□□□□ 0.41
PRKCB-202ENST00000321728 VARS2Q5ST30 1063 aaKnown RBP17.59■□□□□ 0.41
PRKCB-202ENST00000321728 TWF2Q6IBS0 349 aaKnown RBP17.59■□□□□ 0.41
PRKCB-202ENST00000321728 FKBP9P1Q75LS8 142 aa17.59■□□□□ 0.41
PRKCB-202ENST00000321728 SAPCD2Q86UD0 394 aa17.59■□□□□ 0.41
PRKCB-202ENST00000321728 OR6J1Q8NGC5 347 aa17.59■□□□□ 0.41
PRKCB-202ENST00000321728 PSMG2Q969U7 264 aa17.59■□□□□ 0.41
PRKCB-202ENST00000321728 GAD1Q99259 594 aa17.59■□□□□ 0.41
PRKCB-202ENST00000321728 DUSP21Q9H596 190 aa17.59■□□□□ 0.41
PRKCB-202ENST00000321728 HEBP1Q9NRV9 189 aa17.59■□□□□ 0.41
PRKCB-202ENST00000321728 CDH9Q9ULB4 789 aa17.59■□□□□ 0.41
PRKCB-202ENST00000321728 ILVBLA1L0T0 632 aa17.58■□□□□ 0.41
PRKCB-202ENST00000321728 RGS10O43665 173 aa17.58■□□□□ 0.41
PRKCB-202ENST00000321728 CAPN1P07384 714 aa17.58■□□□□ 0.41
PRKCB-202ENST00000321728 HTR7P34969 479 aa17.58■□□□□ 0.41
PRKCB-202ENST00000321728 BMPR1AP36894 532 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms