RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 MYL12AP19105 171 aa16.23■□□□□ 0.19
CLIP4-201ENST00000320081 TPP2P29144 1249 aaPredicted RBP16.23■□□□□ 0.19
CLIP4-201ENST00000320081 CLDN10P78369 228 aa16.23■□□□□ 0.19
CLIP4-201ENST00000320081 SULT2A1Q06520 285 aa16.23■□□□□ 0.19
CLIP4-201ENST00000320081 PIGFQ07326 219 aa16.23■□□□□ 0.19
CLIP4-201ENST00000320081 ARMCX4Q5H9R4 360 aa16.23■□□□□ 0.19
CLIP4-201ENST00000320081 ATAD3BQ5T9A4 648 aa16.23■□□□□ 0.19
CLIP4-201ENST00000320081 OR4F3Q6IEY1 312 aa16.23■□□□□ 0.19
CLIP4-201ENST00000320081 WDR36Q8NI36 951 aaKnown RBP16.23■□□□□ 0.19
CLIP4-201ENST00000320081 PCDH10Q9P2E7 1040 aa16.23■□□□□ 0.19
CLIP4-201ENST00000320081 ENTPD4Q9Y227 616 aa16.23■□□□□ 0.19
CLIP4-201ENST00000320081 LOC730098B7Z3J9 87 aa16.23■□□□□ 0.19
CLIP4-201ENST00000320081 SLC31A1O15431 190 aa16.23■□□□□ 0.19
CLIP4-201ENST00000320081 SLC28A2O43868 658 aa16.23■□□□□ 0.19
CLIP4-201ENST00000320081 GPR32O75388 356 aa16.23■□□□□ 0.19
CLIP4-201ENST00000320081 RNASEH2AO75792 299 aaKnown RBP16.23■□□□□ 0.19
CLIP4-201ENST00000320081 ESR1P03372 595 aa16.23■□□□□ 0.19
CLIP4-201ENST00000320081 PABPC1P11940 636 aaKnown RBP16.23■□□□□ 0.19
CLIP4-201ENST00000320081 IL7RP16871 459 aa16.23■□□□□ 0.19
CLIP4-201ENST00000320081 SRP54P61011 504 aaKnown RBP16.23■□□□□ 0.19
CLIP4-201ENST00000320081 GANABQ14697 944 aaKnown RBP16.23■□□□□ 0.19
CLIP4-201ENST00000320081 THAP5Q7Z6K1 395 aa16.23■□□□□ 0.19
CLIP4-201ENST00000320081 ANKRD49Q8WVL7 239 aa16.23■□□□□ 0.19
CLIP4-201ENST00000320081 KLHL3Q9UH77 587 aa16.23■□□□□ 0.19
CLIP4-201ENST00000320081 RPS6KA6Q9UK32 745 aa16.23■□□□□ 0.19
CLIP4-201ENST00000320081 SDHDO14521 159 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 LIN7AO14910 233 aaPredicted RBP16.22■□□□□ 0.19
CLIP4-201ENST00000320081 STK19P49842 368 aaPredicted RBP16.22■□□□□ 0.19
CLIP4-201ENST00000320081 CDKN1CP49918 316 aaPredicted RBP16.22■□□□□ 0.19
CLIP4-201ENST00000320081 DMPKQ09013 629 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 CCDC149Q6ZUS6 474 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 RNF44Q7L0R7 432 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 ZDHHC21Q8IVQ6 265 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 SMOC2Q9H3U7 446 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 SMURF2Q9HAU4 748 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 CCDC88AQ3V6T2 1871 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 GJB3O75712 270 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 H6PDO95479 791 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 CD68P34810 354 aaPredicted RBP16.22■□□□□ 0.19
CLIP4-201ENST00000320081 PTGER3P43115 390 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 RPS14P62263 151 aaKnown RBP16.22■□□□□ 0.19
CLIP4-201ENST00000320081 FAM189BP81408 668 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 PRR23CQ6ZRP0 262 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 SPATA19Q7Z5L4 167 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 YIPF4Q9BSR8 244 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 KIFC1Q9BW19 673 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 CCDC106Q9BWC9 280 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 INTS7Q9NVH2 962 aaKnown RBP16.22■□□□□ 0.19
CLIP4-201ENST00000320081 LRRC42Q9Y546 428 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 MYH9P35579 1960 aaKnown RBP16.22■□□□□ 0.19
CLIP4-201ENST00000320081 BBIP1A8MTZ0 92 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 CXCR6O00574 342 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 SLC35G4P0C7Q5 338 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 RPL10P27635 214 aaKnown RBP16.22■□□□□ 0.19
CLIP4-201ENST00000320081 GJA5P36382 358 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 NIPAL4Q0D2K0 466 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 UPP1Q16831 310 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 KLHL12Q53G59 568 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 CERS6Q6ZMG9 384 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 GALNT15Q8N3T1 639 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 CAPSLQ8WWF8 208 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 TRIB2Q92519 343 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 NSMCE3Q96MG7 304 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 TRNAU1APQ9NX07 287 aaKnown RBP16.22■□□□□ 0.19
CLIP4-201ENST00000320081 TBC1D3DA0A087WVF3 549 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 TBC1D3IA0A087WXS9 549 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 TBC1D3EA0A087X179 549 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 TBC1D3KA0A087X1G2 549 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 MTMR11A4FU01 709 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 TBC1D3FA6NER0 549 aaPredicted RBP16.22■□□□□ 0.19
CLIP4-201ENST00000320081 TBC1D3LB9A6J9 549 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 TBC1D3HP0C7X1 549 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 IGFBP4P22692 258 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 RYKP34925 604 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 ETV4P43268 484 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 MAPK8P45983 427 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 MAPKAPK2P49137 400 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 CDKN2DP55273 166 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 RNASE12Q5GAN4 147 aaKnown RBP16.22■□□□□ 0.19
CLIP4-201ENST00000320081 TBC1D3GQ6DHY5 549 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 TBC1D3CQ6IPX1 549 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 TBC1D3Q8IZP1 549 aaPredicted RBP16.22■□□□□ 0.19
CLIP4-201ENST00000320081 BEND7Q8N7W2 519 aaPredicted RBP16.22■□□□□ 0.19
CLIP4-201ENST00000320081 OR52B6Q8NGF0 335 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 FERD3LQ96RJ6 166 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 ATAD3AQ9NVI7 634 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 RAB26Q9ULW5 256 aa16.22■□□□□ 0.19
CLIP4-201ENST00000320081 CAB39Q9Y376 341 aaPredicted RBP16.22■□□□□ 0.19
CLIP4-201ENST00000320081 JUNP05412 331 aaKnown RBP16.21■□□□□ 0.19
CLIP4-201ENST00000320081 IST1P53990 364 aa16.21■□□□□ 0.19
CLIP4-201ENST00000320081 PTPN5P54829 565 aa16.21■□□□□ 0.19
CLIP4-201ENST00000320081 MERTKQ12866 999 aa16.21■□□□□ 0.19
CLIP4-201ENST00000320081 HKDC1Q2TB90 917 aa16.21■□□□□ 0.19
CLIP4-201ENST00000320081 C18orf21Q32NC0 220 aaPredicted RBP16.21■□□□□ 0.19
CLIP4-201ENST00000320081 EMC10Q5UCC4 262 aa16.21■□□□□ 0.19
CLIP4-201ENST00000320081 PIK3R6Q5UE93 754 aa16.21■□□□□ 0.19
CLIP4-201ENST00000320081 EGFLAMQ63HQ2 1017 aa16.21■□□□□ 0.19
CLIP4-201ENST00000320081 C19orf18Q8NEA5 215 aa16.21■□□□□ 0.19
CLIP4-201ENST00000320081 ATL1Q8WXF7 558 aa16.21■□□□□ 0.19
CLIP4-201ENST00000320081 BTBD9Q96Q07 612 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms