RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 H3BMQ9 156 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 TPPPO94811 219 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 CLDN7O95471 211 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 CYP17A1P05093 508 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 CD1DP15813 335 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 ZNF37AP17032 561 aaPredicted RBP12.85□□□□□ -0.35
CPNE1-201ENST00000317677 VIPR2P41587 438 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 NRIP1P48552 1158 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 IDH3AP50213 366 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 CD300CQ08708 224 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 MESP2Q0VG99 397 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 FAM83EQ2M2I3 478 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 ARL13AQ5H913 290 aaPredicted RBP12.85□□□□□ -0.35
CPNE1-201ENST00000317677 DPY19L3Q6ZPD9 716 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 Q6ZVU0 165 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 C12orf40Q86WS4 652 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 RYBPQ8N488 228 aaPredicted RBP12.85□□□□□ -0.35
CPNE1-201ENST00000317677 ST13P5Q8NFI4 369 aaPredicted RBP12.85□□□□□ -0.35
CPNE1-201ENST00000317677 SORCS1Q8WY21 1168 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 ISG20Q96AZ6 181 aaKnown RBP12.85□□□□□ -0.35
CPNE1-201ENST00000317677 COG8Q96MW5 612 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 ANKRD60Q9BZ19 345 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 GPR63Q9BZJ6 419 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 POMKQ9H5K3 350 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 ATP13A3Q9H7F0 1226 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 CAAP1Q9H8G2 361 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 DNAJC28Q9NX36 388 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 TBC1D14Q9P2M4 693 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 ANKMY1Q9P2S6 941 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 BRWD1Q9NSI6 2320 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 NPIPB15A6NHN6 443 aaPredicted RBP12.85□□□□□ -0.35
CPNE1-201ENST00000317677 NOTOA8MTQ0 251 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 A8MX80 341 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 ZNF197O14709 1029 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 BNIP3LO60238 219 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 HSPA4LO95757 839 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 TFEBP19484 476 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 MAPK8P45983 427 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 SNRPD1P62314 119 aaKnown RBP12.85□□□□□ -0.35
CPNE1-201ENST00000317677 ACAP2Q15057 778 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 DHCR24Q15392 516 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 PTPRNQ16849 979 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 ZRANB3Q5FWF4 1079 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 AGAP9Q5VTM2 703 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 XKR5Q6UX68 686 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 RPS27LQ71UM5 84 aaKnown RBP12.85□□□□□ -0.35
CPNE1-201ENST00000317677 METTL3Q86U44 580 aaKnown RBP12.85□□□□□ -0.35
CPNE1-201ENST00000317677 CADM3Q8N126 398 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 LILRB4Q8NHJ6 448 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 AGR3Q8TD06 166 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 TANKQ92844 425 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 ASB2Q96Q27 587 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 TCF12Q99081 682 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 DCUN1D5Q9BTE7 237 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 COL25A1Q9BXS0 654 aaPredicted RBP12.85□□□□□ -0.35
CPNE1-201ENST00000317677 ALG9Q9H6U8 611 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 CXorf21Q9HAI6 301 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 POPDC3Q9HBV1 291 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 CYP4F12Q9HCS2 524 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 CRNNQ9UBG3 495 aaPredicted RBP12.85□□□□□ -0.35
CPNE1-201ENST00000317677 FBXO10Q9UK96 956 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 C1orf232A0A0U1RR37 186 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 C7orf72A4D263 438 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 MUC22E2RYF6 1773 aaPredicted RBP12.84□□□□□ -0.35
CPNE1-201ENST00000317677 NIPSNAP2O75323 286 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 H2AFYO75367 372 aaKnown RBP12.84□□□□□ -0.35
CPNE1-201ENST00000317677 CISD3P0C7P0 127 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 ATP5F1P24539 256 aaPredicted RBP12.84□□□□□ -0.35
CPNE1-201ENST00000317677 SERPINA4P29622 427 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 SLC26A3P40879 764 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 PRKAA2P54646 552 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 DNAJB13P59910 316 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 ECT2LQ008S8 904 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 DMPKQ09013 629 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 SF3B4Q15427 424 aaKnown RBP eCLIP12.84□□□□□ -0.351e-7■■■■■ 42.2
CPNE1-201ENST00000317677 OR4D1Q15615 310 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 GAB4Q2WGN9 574 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 EML3Q32P44 896 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 CARD16Q5EG05 197 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 PAQR3Q6TCH7 311 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 CRTC1Q6UUV9 634 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 NPAS3Q8IXF0 933 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 SLC15A4Q8N697 577 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 GRIN3AQ8TCU5 1115 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 FRS2Q8WU20 508 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 CYB5D2Q8WUJ1 264 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 OTUB2Q96DC9 234 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 MRPL38Q96DV4 380 aaKnown RBP12.84□□□□□ -0.35
CPNE1-201ENST00000317677 MED30Q96HR3 178 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 PKP2Q99959 881 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 SHCBP1LQ9BZQ2 653 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 CEP44Q9C0F1 390 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 P2RY12Q9H244 342 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 MTG2Q9H4K7 406 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 COPS7BQ9H9Q2 264 aaPredicted RBP12.84□□□□□ -0.35
CPNE1-201ENST00000317677 ZFYVE1Q9HBF4 777 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 TNFRSF12AQ9NP84 129 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 ZDHHC2Q9UIJ5 367 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 SLC25A13Q9UJS0 675 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 ERVW-1Q9UQF0 538 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms