RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 GUCA1BQ9UMX6 200 aa17.32■□□□□ 0.36
TPM1-203ENST00000317516 ZNF148Q9UQR1 794 aa17.32■□□□□ 0.36
TPM1-203ENST00000317516 TCRBV7S2A1N4TA0A589 114 aa17.31■□□□□ 0.36
TPM1-203ENST00000317516 GOLGA6L3A6NEY3 463 aa17.31■□□□□ 0.36
TPM1-203ENST00000317516 E7EVH7 732 aa17.31■□□□□ 0.36
TPM1-203ENST00000317516 MATN2O00339 956 aa17.31■□□□□ 0.36
TPM1-203ENST00000317516 QSOX1O00391 747 aa17.31■□□□□ 0.36
TPM1-203ENST00000317516 CCL22O00626 93 aa17.31■□□□□ 0.36
TPM1-203ENST00000317516 AP2A2O94973 939 aa17.31■□□□□ 0.36
TPM1-203ENST00000317516 ZBTB11O95625 1053 aaPredicted RBP17.31■□□□□ 0.36
TPM1-203ENST00000317516 PRKAR1AP10644 381 aa17.31■□□□□ 0.36
TPM1-203ENST00000317516 ZNF28P17035 718 aa17.31■□□□□ 0.36
TPM1-203ENST00000317516 ITGB6P18564 788 aa17.31■□□□□ 0.36
TPM1-203ENST00000317516 DLSTP36957 453 aa17.31■□□□□ 0.36
TPM1-203ENST00000317516 FDFT1P37268 417 aa17.31■□□□□ 0.36
TPM1-203ENST00000317516 CD151P48509 253 aa17.31■□□□□ 0.36
TPM1-203ENST00000317516 PPP1CAP62136 330 aa17.31■□□□□ 0.36
TPM1-203ENST00000317516 CDC20Q12834 499 aa17.31■□□□□ 0.36
TPM1-203ENST00000317516 CDH17Q12864 832 aa17.31■□□□□ 0.36
TPM1-203ENST00000317516 PRICKLE2Q7Z3G6 844 aa17.31■□□□□ 0.36
TPM1-203ENST00000317516 ACVR1CQ8NER5 493 aa17.31■□□□□ 0.36
TPM1-203ENST00000317516 OR4E2Q8NGC2 313 aa17.31■□□□□ 0.36
TPM1-203ENST00000317516 FERD3LQ96RJ6 166 aa17.31■□□□□ 0.36
TPM1-203ENST00000317516 TTC1Q99614 292 aa17.31■□□□□ 0.36
TPM1-203ENST00000317516 COG4Q9H9E3 785 aa17.31■□□□□ 0.36
TPM1-203ENST00000317516 FGF21Q9NSA1 209 aa17.31■□□□□ 0.36
TPM1-203ENST00000317516 GCN1Q92616 2671 aaKnown RBP17.31■□□□□ 0.36
TPM1-203ENST00000317516 F8W8V4 182 aa17.3■□□□□ 0.36
TPM1-203ENST00000317516 MAP3K7O43318 606 aa17.3■□□□□ 0.36
TPM1-203ENST00000317516 LIASO43766 372 aa17.3■□□□□ 0.36
TPM1-203ENST00000317516 IFNB1P01574 187 aa17.3■□□□□ 0.36
TPM1-203ENST00000317516 FOLR1P15328 257 aa17.3■□□□□ 0.36
TPM1-203ENST00000317516 NSG1P42857 185 aa17.3■□□□□ 0.36
TPM1-203ENST00000317516 CDKN1CP49918 316 aaPredicted RBP17.3■□□□□ 0.36
TPM1-203ENST00000317516 POLE2P56282 527 aa17.3■□□□□ 0.36
TPM1-203ENST00000317516 DUS1LQ6P1R4 473 aaKnown RBP17.3■□□□□ 0.36
TPM1-203ENST00000317516 C16orf46Q6P387 395 aa17.3■□□□□ 0.36
TPM1-203ENST00000317516 D2HGDHQ8N465 521 aa17.3■□□□□ 0.36
TPM1-203ENST00000317516 TAB3Q8N5C8 712 aaPredicted RBP17.3■□□□□ 0.36
TPM1-203ENST00000317516 LILRA3Q8N6C8 439 aaPredicted RBP17.3■□□□□ 0.36
TPM1-203ENST00000317516 OR8K5Q8NH50 307 aa17.3■□□□□ 0.36
TPM1-203ENST00000317516 APOBEC4Q8WW27 367 aaKnown RBP17.3■□□□□ 0.36
TPM1-203ENST00000317516 LCN9Q8WX39 176 aa17.3■□□□□ 0.36
TPM1-203ENST00000317516 ATG4AQ8WYN0 398 aa17.3■□□□□ 0.36
TPM1-203ENST00000317516 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.3■□□□□ 0.36
TPM1-203ENST00000317516 RMDN2Q96LZ7 410 aa17.3■□□□□ 0.36
TPM1-203ENST00000317516 SRMSQ9H3Y6 488 aa17.3■□□□□ 0.36
TPM1-203ENST00000317516 MVB12BQ9H7P6 319 aa17.3■□□□□ 0.36
TPM1-203ENST00000317516 SMARCAL1Q9NZC9 954 aa17.3■□□□□ 0.36
TPM1-203ENST00000317516 CROTQ9UKG9 612 aa17.3■□□□□ 0.36
TPM1-203ENST00000317516 HEATR9A2RTY3 570 aa17.29■□□□□ 0.36
TPM1-203ENST00000317516 MROH6A6NGR9 719 aa17.29■□□□□ 0.36
TPM1-203ENST00000317516 KATNA1O75449 491 aa17.29■□□□□ 0.36
TPM1-203ENST00000317516 PSMA3P25788 255 aa17.29■□□□□ 0.36
TPM1-203ENST00000317516 MSNP26038 577 aaKnown RBP17.29■□□□□ 0.36
TPM1-203ENST00000317516 TUBB4BP68371 445 aa17.29■□□□□ 0.36
TPM1-203ENST00000317516 KCNAB2Q13303 367 aa17.29■□□□□ 0.36
TPM1-203ENST00000317516 TUBB2AQ13885 445 aa17.29■□□□□ 0.36
TPM1-203ENST00000317516 ITIH4Q14624 930 aa17.29■□□□□ 0.36
TPM1-203ENST00000317516 RPS6KA1Q15418 735 aa17.29■□□□□ 0.36
TPM1-203ENST00000317516 LYPLAL1Q5VWZ2 237 aa17.29■□□□□ 0.36
TPM1-203ENST00000317516 PPP1R21Q6ZMI0 780 aa17.29■□□□□ 0.36
TPM1-203ENST00000317516 ATG14Q6ZNE5 492 aa17.29■□□□□ 0.36
TPM1-203ENST00000317516 SLC13A5Q86YT5 568 aaPredicted RBP17.29■□□□□ 0.36
TPM1-203ENST00000317516 OR52K1Q8NGK4 314 aa17.29■□□□□ 0.36
TPM1-203ENST00000317516 TUBB2BQ9BVA1 445 aa17.29■□□□□ 0.36
TPM1-203ENST00000317516 ETNK1Q9HBU6 452 aa17.29■□□□□ 0.36
TPM1-203ENST00000317516 PIH1D1Q9NWS0 290 aaKnown RBP17.29■□□□□ 0.36
TPM1-203ENST00000317516 SPTA1P02549 2419 aa17.29■□□□□ 0.36
TPM1-203ENST00000317516 C21orf140B9A014 251 aa17.28■□□□□ 0.36
TPM1-203ENST00000317516 LIN7AO14910 233 aaPredicted RBP17.28■□□□□ 0.36
TPM1-203ENST00000317516 ARHGAP6O43182 974 aa17.28■□□□□ 0.36
TPM1-203ENST00000317516 RECKO95980 971 aa17.28■□□□□ 0.36
TPM1-203ENST00000317516 FTH1P02794 183 aa17.28■□□□□ 0.36
TPM1-203ENST00000317516 EBLN1P0CF75 366 aa17.28■□□□□ 0.36
TPM1-203ENST00000317516 POLR2CP19387 275 aaPredicted RBP17.28■□□□□ 0.36
TPM1-203ENST00000317516 PPARGP37231 505 aaPredicted RBP17.28■□□□□ 0.36
TPM1-203ENST00000317516 PLOD1Q02809 727 aaPredicted RBP17.28■□□□□ 0.36
TPM1-203ENST00000317516 KCNAB1Q14722 419 aa17.28■□□□□ 0.36
TPM1-203ENST00000317516 OASLQ15646 514 aaKnown RBP17.28■□□□□ 0.36
TPM1-203ENST00000317516 DBN1Q16643 649 aa17.28■□□□□ 0.36
TPM1-203ENST00000317516 DEFB109BQ30KR1 87 aa17.28■□□□□ 0.36
TPM1-203ENST00000317516 PWWP2BQ6NUJ5 590 aa17.28■□□□□ 0.36
TPM1-203ENST00000317516 PIANPQ8IYJ0 282 aa17.28■□□□□ 0.36
TPM1-203ENST00000317516 CLDN19Q8N6F1 224 aa17.28■□□□□ 0.36
TPM1-203ENST00000317516 CCDC89Q8N998 374 aa17.28■□□□□ 0.36
TPM1-203ENST00000317516 TFGQ92734 400 aaPredicted RBP17.28■□□□□ 0.36
TPM1-203ENST00000317516 OR52A5Q9H2C5 316 aa17.28■□□□□ 0.36
TPM1-203ENST00000317516 TFB2MQ9H5Q4 396 aaKnown RBP17.28■□□□□ 0.36
TPM1-203ENST00000317516 FANCEQ9HB96 536 aa17.28■□□□□ 0.36
TPM1-203ENST00000317516 SYTL2Q9HCH5 934 aa17.28■□□□□ 0.36
TPM1-203ENST00000317516 LHX9Q9NQ69 397 aa17.28■□□□□ 0.36
TPM1-203ENST00000317516 C1GALT1Q9NS00 363 aa17.28■□□□□ 0.36
TPM1-203ENST00000317516 KCND1Q9NSA2 647 aa17.28■□□□□ 0.36
TPM1-203ENST00000317516 SOHLH2Q9NX45 425 aa17.28■□□□□ 0.36
TPM1-203ENST00000317516 SUN1O94901 812 aa17.27■□□□□ 0.36
TPM1-203ENST00000317516 CDH3P22223 829 aa17.27■□□□□ 0.36
TPM1-203ENST00000317516 F8A1P23610 371 aa17.27■□□□□ 0.36
TPM1-203ENST00000317516 ADRA1DP25100 572 aa17.27■□□□□ 0.36
TPM1-203ENST00000317516 OAS2P29728 719 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms