RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 BOP1Q14137 746 aaKnown RBP7.49□□□□□ -1.21
TRIM55-202ENST00000315962 FASTKQ14296 549 aaKnown RBP7.49□□□□□ -1.21
TRIM55-202ENST00000315962 DHCR24Q15392 516 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 TYSND1Q2T9J0 566 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 SGO1Q5FBB7 561 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 GPR107Q5VW38 600 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 REP15Q6BDI9 236 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 CYHR1Q6ZMK1 362 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 ZBTB49Q6ZSB9 765 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 UBE2Q1Q7Z7E8 422 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 TICAM1Q8IUC6 712 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 SPPL2CQ8IUH8 684 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 CHERPQ8IWX8 916 aaKnown RBP7.49□□□□□ -1.21
TRIM55-202ENST00000315962 AHI1Q8N157 1196 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 PARP8Q8N3A8 854 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 FBXO39Q8N4B4 442 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 CBR4Q8N4T8 237 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 CDYL2Q8N8U2 506 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 DLG3Q92796 817 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 FGF13Q92913 245 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 PYCR2Q96C36 320 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 MTFMTQ96DP5 389 aaKnown RBP7.49□□□□□ -1.21
TRIM55-202ENST00000315962 SIKE1Q9BRV8 207 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 RPP25Q9BUL9 199 aaKnown RBP7.49□□□□□ -1.21
TRIM55-202ENST00000315962 PRM3Q9NNZ6 103 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 LTB4R2Q9NPC1 389 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 IRAK3Q9Y616 596 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 PRR23AA6NEV1 266 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 TMEM114B3SHH9 223 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 FFAR3O14843 346 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 GPR42O15529 346 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 XYLBO75191 536 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 CRCPO75575 148 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 TSPAN12O95859 305 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 IMPDH1P20839 514 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 AKT1P31749 480 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 GGT5P36269 586 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 RECQLP46063 649 aaPredicted RBP7.48□□□□□ -1.21
TRIM55-202ENST00000315962 NR1H2P55055 460 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 AP1S1P61966 158 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 HERVK_113P63132 956 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 GRB7Q14451 532 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 PHKG1Q16816 387 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 TMEM259Q4ZIN3 620 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 SNX29P2Q8IUI4 249 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 PELI3Q8N2H9 469 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 LILRA3Q8N6C8 439 aaPredicted RBP7.48□□□□□ -1.21
TRIM55-202ENST00000315962 ADCY4Q8NFM4 1077 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 HERVK_113Q902F9 699 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 RMND5BQ96G75 393 aaPredicted RBP7.48□□□□□ -1.21
TRIM55-202ENST00000315962 ATOH8Q96SQ7 321 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 C1orf50Q9BV19 199 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 ERVK-6Q9BXR3 956 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 ZNF696Q9H7X3 374 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 MAGEE1Q9HCI5 957 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 OLAHQ9NV23 265 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 SLC25A13Q9UJS0 675 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 PRPF19Q9UMS4 504 aaKnown RBP7.48□□□□□ -1.21
TRIM55-202ENST00000315962 NUP214P35658 2090 aaPredicted RBP7.48□□□□□ -1.21
TRIM55-202ENST00000315962 TRIOBPQ9H2D6 2365 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 PRMT5O14744 637 aaPredicted RBP7.48□□□□□ -1.21
TRIM55-202ENST00000315962 MRASO14807 208 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 PIP5K1BO14986 540 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 SCAMP1O15126 338 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 HTRA2O43464 458 aaPredicted RBP7.48□□□□□ -1.21
TRIM55-202ENST00000315962 SNX2O60749 519 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 SH3BGRLO75368 114 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 TULP3O75386 442 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 GPC4O75487 556 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 ATE1O95260 518 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 PBLDP30039 288 aaPredicted RBP7.48□□□□□ -1.21
TRIM55-202ENST00000315962 OXTRP30559 389 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 SOX9P48436 509 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 CREMQ03060 361 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 PPP1R8Q12972 351 aaKnown RBP7.48□□□□□ -1.21
TRIM55-202ENST00000315962 TGFBIQ15582 683 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 RBBP7Q16576 425 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 KIF19Q2TAC6 998 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 ZIK1Q3SY52 487 aaPredicted RBP7.48□□□□□ -1.21
TRIM55-202ENST00000315962 CARD16Q5EG05 197 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 TMEM26Q6ZUK4 368 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 CHSY3Q70JA7 882 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 FRA10AC1Q70Z53 315 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 HSD11B1LQ7Z5J1 315 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 GPR150Q8NGU9 434 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 STAG3L4Q8TBR4 150 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 SGCDQ92629 289 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 PLEKHG4BQ96PX9 1271 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 EGFL8Q99944 293 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 PAIP1Q9H074 479 aaKnown RBP7.48□□□□□ -1.21
TRIM55-202ENST00000315962 SMOXQ9NWM0 555 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 CACNA2D2Q9NY47 1150 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 THEGQ9P2T0 379 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 ZNHIT2Q9UHR6 403 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 PRKAB1Q9Y478 270 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 PLXNA4Q9HCM2 1894 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 TMEM202A6NGA9 273 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 TRIM38O00635 465 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 AP1G1O43747 822 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 KCNH1O95259 989 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms