RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 PFKLP17858 780 aa6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 CAPN3P20807 821 aa6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 COL9A1P20849 921 aa6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 SLC26A3P40879 764 aa6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 CASP2P42575 452 aa6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 RPIAP49247 311 aa6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 MNAT1P51948 309 aa6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 UFM1P61960 85 aa6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 TBL3Q12788 808 aaKnown RBP6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 TMEM115Q12893 351 aaPredicted RBP6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 TRAF3Q13114 568 aa6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 ADAM15Q13444 863 aa6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 GTF2H2Q13888 395 aa6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 NFE2L1Q14494 772 aa6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 PTGR1Q14914 329 aa6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 PON2Q15165 354 aa6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 RCN1Q15293 331 aa6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 KIF19Q2TAC6 998 aa6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 RFTN2Q52LD8 501 aaPredicted RBP6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 ATAT1Q5SQI0 421 aa6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 GTF2H2CQ6P1K8 395 aa6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 UBE2R2Q712K3 238 aaPredicted RBP6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 TRAPPC5Q8IUR0 188 aa6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 SCUBE1Q8IWY4 988 aa6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 KIRREL3Q8IZU9 778 aa6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 ZNF483Q8TF39 744 aaPredicted RBP6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 POPDC3Q9HBV1 291 aa6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 MRPL40Q9NQ50 206 aaKnown RBP6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 GDE1Q9NZC3 331 aa6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 WWOXQ9NZC7 414 aa6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 SLC23A2Q9UGH3 650 aa6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 STON1Q9Y6Q2 735 aa6.86□□□□□ -1.31
LYSMD3-201ENST00000315948 F8W8V4 182 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 NR5A2O00482 541 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 AREL1O15033 823 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 PCDH8O95206 1070 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 EGFP01133 1207 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 XRCC1P18887 633 aaPredicted RBP6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 IL12AP29459 219 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 ATP6V0D1P61421 351 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 POLR2LP62875 67 aaKnown RBP6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 CEACAM7Q14002 265 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 FASTKQ14296 549 aaKnown RBP6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 C1orf146Q5VVC0 180 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 IL27RAQ6UWB1 636 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 ISLR2Q6UXK2 745 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 LSRQ86X29 649 aaPredicted RBP6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 TMPRSS6Q8IU80 811 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 YAF2Q8IY57 180 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 CLYBLQ8N0X4 340 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 SFRP1Q8N474 314 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 PHC3Q8NDX5 983 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 CEP70Q8NHQ1 597 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 METTL6Q8TCB7 284 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 SUSD6Q92537 303 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 IL17FQ96PD4 163 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 LIMD1Q9UGP4 676 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 IGLV3-16A0A075B6K0 115 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 H0Y8X5 98 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 WNT9AO14904 365 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 KLK8O60259 260 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 ADAM23O75077 832 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 H2AFYO75367 372 aaKnown RBP6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 RNASEH2AO75792 299 aaKnown RBP6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 EZRP15311 586 aaKnown RBP6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 MEF2AQ02078 507 aaPredicted RBP6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 PRKG2Q13237 762 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 CYLC2Q14093 348 aaPredicted RBP6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 ELAVL3Q14576 367 aaKnown RBP6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 PDGFRLQ15198 375 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 PTCHD3Q3KNS1 767 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 PIP5KL1Q5T9C9 394 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 DUS1LQ6P1R4 473 aaKnown RBP6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 DPPA4Q7L190 304 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 LCA5Q86VQ0 697 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 FAM20CQ8IXL6 584 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 CBARPQ8N350 705 aaPredicted RBP6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 GLYATL1Q969I3 302 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 TTC1Q99614 292 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 TRMT61BQ9BVS5 477 aaKnown RBP6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 INTS7Q9NVH2 962 aaKnown RBP6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 PKD2L2Q9NZM6 624 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 ATXN10Q9UBB4 475 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 CORO1CQ9ULV4 474 aaPredicted RBP6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 ARHGEF33A8MVX0 844 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 RAD51BO15315 384 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 LZTS3O60299 673 aaPredicted RBP6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 GPC4O75487 556 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 RPSAP08865 295 aaKnown RBP6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 ZNF8P17098 575 aaPredicted RBP6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 MSH3P20585 1137 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 EFNA1P20827 205 aaPredicted RBP6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 SATB1Q01826 763 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 DMC1Q14565 340 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 GPR33Q49SQ1 333 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 PREPLQ4J6C6 727 aaPredicted RBP6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 SUSD1Q6UWL2 747 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 GPRIN3Q6ZVF9 776 aa6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 RAB44Q7Z6P3 723 aaPredicted RBP6.85□□□□□ -1.31
LYSMD3-201ENST00000315948 RAVER1Q8IY67 606 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms