RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 V9GYY5 206 aaPredicted RBP7.7□□□□□ -1.18
CDC42-201ENST00000315554 DNAH14Q0VDD8 3507 aa7.7□□□□□ -1.18
CDC42-201ENST00000315554 COL5A1P20908 1838 aaPredicted RBP7.69□□□□□ -1.18
CDC42-201ENST00000315554 EME2A4GXA9 379 aaPredicted RBP7.69□□□□□ -1.18
CDC42-201ENST00000315554 FAM149AA5PLN7 773 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 RHPN2P1A8MT19 583 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 HYAL3O43820 417 aaPredicted RBP7.69□□□□□ -1.18
CDC42-201ENST00000315554 FTH1P02794 183 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 RPLP0P05388 317 aaKnown RBP7.69□□□□□ -1.18
CDC42-201ENST00000315554 SLC35G4P0C7Q5 338 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 GABRB3P28472 473 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 ALDH4A1P30038 563 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 CCR7P32248 378 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 PPARGP37231 505 aaPredicted RBP7.69□□□□□ -1.18
CDC42-201ENST00000315554 PGGT1BP53609 377 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 CCL7P80098 99 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 DMPKQ09013 629 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 RPE65Q16518 533 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 AMZ1Q400G9 498 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 ZNF658BQ4V348 819 aaPredicted RBP7.69□□□□□ -1.18
CDC42-201ENST00000315554 TEDDM1Q5T9Z0 273 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 NKAIN2Q5VXU1 208 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 ARMC3Q5W041 872 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 METRNLQ641Q3 311 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 ZNF549Q6P9A3 640 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 C17orf82Q86X59 251 aaPredicted RBP7.69□□□□□ -1.18
CDC42-201ENST00000315554 CCNJLQ8IV13 435 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 VRK3Q8IV63 474 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 TRIM48Q8IWZ4 208 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 SFRP1Q8N474 314 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 GSDMBQ8TAX9 411 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 CXorf40BQ96DE9 158 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 ATXN7L3BQ96GX2 97 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 LINC00615Q96LM1 132 aaPredicted RBP7.69□□□□□ -1.18
CDC42-201ENST00000315554 C12orf66Q96MD2 445 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 BIRC8Q96P09 236 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 NDNQ99608 321 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 NRTNQ99748 197 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 NAT9Q9BTE0 207 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 VPS37BQ9H9H4 285 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 IMP3Q9NV31 184 aaKnown RBP7.69□□□□□ -1.18
CDC42-201ENST00000315554 ZNF624Q9P2J8 865 aaPredicted RBP7.69□□□□□ -1.18
CDC42-201ENST00000315554 CPNE7Q9UBL6 633 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 GNPTGQ9UJJ9 305 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 FBXO9Q9UK97 447 aaPredicted RBP7.69□□□□□ -1.18
CDC42-201ENST00000315554 ATXN7L1Q9ULK2 861 aaPredicted RBP7.69□□□□□ -1.18
CDC42-201ENST00000315554 PSAT1Q9Y617 370 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 DNMT3AQ9Y6K1 912 aaPredicted RBP7.69□□□□□ -1.18
CDC42-201ENST00000315554 GOLGA4Q13439 2230 aaKnown RBP7.69□□□□□ -1.18
CDC42-201ENST00000315554 PCNX2A6NKB5 2137 aa7.69□□□□□ -1.18
CDC42-201ENST00000315554 MED19A0JLT2 244 aaPredicted RBP7.68□□□□□ -1.18
CDC42-201ENST00000315554 CXorf49A8MYA2 514 aaPredicted RBP7.68□□□□□ -1.18
CDC42-201ENST00000315554 EIF3HO15372 352 aaKnown RBP eCLIP7.68□□□□□ -1.18
CDC42-201ENST00000315554 B4GAT1O43505 415 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 OPA1O60313 960 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 VIPP01282 170 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 PKMP14618 531 aaKnown RBP7.68□□□□□ -1.18
CDC42-201ENST00000315554 GLB1P16278 677 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 CHRM3P20309 590 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 RPS3P23396 243 aaKnown RBP eCLIP7.68□□□□□ -1.183e-8■■■■□ 24.5
CDC42-201ENST00000315554 HALP42357 657 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 UBE2IP63279 158 aaKnown RBP7.68□□□□□ -1.18
CDC42-201ENST00000315554 HHEXQ03014 270 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 MGAT5Q09328 741 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 HSPA14Q0VDF9 509 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 EFTUD2Q15029 972 aaKnown RBP eCLIP7.68□□□□□ -1.183e-7■■■□□ 16.7
CDC42-201ENST00000315554 KYNUQ16719 465 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 RBM20Q5T481 1227 aaKnown RBP7.68□□□□□ -1.18
CDC42-201ENST00000315554 RNF187Q5TA31 235 aaPredicted RBP7.68□□□□□ -1.18
CDC42-201ENST00000315554 HES3Q5TGS1 186 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 AGAP9Q5VTM2 703 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 ABRAXAS1Q6UWZ7 409 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 C3orf62Q6ZUJ4 267 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 USP53Q70EK8 1073 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 SLC9B2Q86UD5 537 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 IFT20Q8IY31 132 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 SIDT2Q8NBJ9 832 aaKnown RBP7.68□□□□□ -1.18
CDC42-201ENST00000315554 C2CD4AQ8NCU7 369 aaPredicted RBP7.68□□□□□ -1.18
CDC42-201ENST00000315554 PHC3Q8NDX5 983 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 CFAP61Q8NHU2 1237 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 SNIP1Q8TAD8 396 aaKnown RBP7.68□□□□□ -1.18
CDC42-201ENST00000315554 UHMK1Q8TAS1 419 aaKnown RBP7.68□□□□□ -1.18
CDC42-201ENST00000315554 CALML6Q8TD86 181 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 NAT6Q93015 286 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 TCF12Q99081 682 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 SPSB2Q99619 263 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 SLC30A3Q99726 388 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 TBC1D10AQ9BXI6 508 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 ABCG4Q9H172 646 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 OR52A5Q9H2C5 316 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 LRRC4CQ9HCJ2 640 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 EVA1BQ9NVM1 165 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 INTS10Q9NVR2 710 aaKnown RBP7.68□□□□□ -1.18
CDC42-201ENST00000315554 NINJ2Q9NZG7 142 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 NCKIPSDQ9NZQ3 722 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 ZFATQ9P243 1243 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 MTRF1LQ9UGC7 380 aaKnown RBP7.68□□□□□ -1.18
CDC42-201ENST00000315554 CIDEBQ9UHD4 219 aa7.68□□□□□ -1.18
CDC42-201ENST00000315554 RUVBL2Q9Y230 463 aaKnown RBP7.68□□□□□ -1.18
CDC42-201ENST00000315554 ARHGEF17Q96PE2 2063 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms